RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 ZNF530Q6P9A1 599 aaPredicted RBP16.43■□□□□ 0.22
VLDLR-202ENST00000382099 LRIG3Q6UXM1 1119 aa16.43■□□□□ 0.22
VLDLR-202ENST00000382099 LCA5Q86VQ0 697 aa16.43■□□□□ 0.22
VLDLR-202ENST00000382099 CCNJLQ8IV13 435 aa16.43■□□□□ 0.22
VLDLR-202ENST00000382099 PHC3Q8NDX5 983 aa16.43■□□□□ 0.22
VLDLR-202ENST00000382099 FAM163AQ96GL9 167 aaPredicted RBP16.43■□□□□ 0.22
VLDLR-202ENST00000382099 DNAJC7Q99615 494 aa16.43■□□□□ 0.22
VLDLR-202ENST00000382099 TRIM31Q9BZY9 425 aa16.43■□□□□ 0.22
VLDLR-202ENST00000382099 FBXO2Q9UK22 296 aaPredicted RBP16.43■□□□□ 0.22
VLDLR-202ENST00000382099 PCDHA13Q9Y5I0 950 aa16.43■□□□□ 0.22
VLDLR-202ENST00000382099 USP46P62068 366 aa16.43■□□□□ 0.22
VLDLR-202ENST00000382099 C2CD5Q86YS7 1000 aa16.43■□□□□ 0.22
VLDLR-202ENST00000382099 RAB17Q9H0T7 212 aa16.43■□□□□ 0.22
VLDLR-202ENST00000382099 ETNK1Q9HBU6 452 aa16.43■□□□□ 0.22
VLDLR-202ENST00000382099 CHMP2BQ9UQN3 213 aa16.43■□□□□ 0.22
VLDLR-202ENST00000382099 MAGEA1P43355 309 aa16.43■□□□□ 0.22
VLDLR-202ENST00000382099 UAP1Q16222 522 aaPredicted RBP16.43■□□□□ 0.22
VLDLR-202ENST00000382099 MIGA2Q7L4E1 593 aa16.43■□□□□ 0.22
VLDLR-202ENST00000382099 BABAM1Q9NWV8 329 aa16.43■□□□□ 0.22
VLDLR-202ENST00000382099 INTUQ9ULD6 942 aa16.43■□□□□ 0.22
VLDLR-202ENST00000382099 CAPN11Q9UMQ6 739 aa16.43■□□□□ 0.22
VLDLR-202ENST00000382099 PHF24Q9UPV7 400 aa16.43■□□□□ 0.22
VLDLR-202ENST00000382099 MYH15Q9Y2K3 1946 aa16.43■□□□□ 0.22
VLDLR-202ENST00000382099 AFF2P51816 1311 aa16.42■□□□□ 0.22
VLDLR-202ENST00000382099 HNRNPCP07910 306 aaKnown RBP eCLIP16.42■□□□□ 0.22
VLDLR-202ENST00000382099 ZC3H18Q86VM9 953 aaKnown RBP16.42■□□□□ 0.22
VLDLR-202ENST00000382099 UHMK1Q8TAS1 419 aaKnown RBP16.42■□□□□ 0.22
VLDLR-202ENST00000382099 NUDCD1Q96RS6 583 aa16.42■□□□□ 0.22
VLDLR-202ENST00000382099 SH2D4AQ9H788 454 aa16.42■□□□□ 0.22
VLDLR-202ENST00000382099 CNOT10Q9H9A5 744 aaKnown RBP16.42■□□□□ 0.22
VLDLR-202ENST00000382099 DBF4Q9UBU7 674 aaPredicted RBP16.42■□□□□ 0.22
VLDLR-202ENST00000382099 HNRNPRO43390 633 aaKnown RBP16.42■□□□□ 0.22
VLDLR-202ENST00000382099 MBD4O95243 580 aa16.42■□□□□ 0.22
VLDLR-202ENST00000382099 ETS2P15036 469 aa16.42■□□□□ 0.22
VLDLR-202ENST00000382099 KCNA3P22001 575 aa16.42■□□□□ 0.22
VLDLR-202ENST00000382099 TNNC1P63316 161 aa16.42■□□□□ 0.22
VLDLR-202ENST00000382099 TFCP2Q12800 502 aa16.42■□□□□ 0.22
VLDLR-202ENST00000382099 TMC4Q7Z404 712 aa16.42■□□□□ 0.22
VLDLR-202ENST00000382099 NOSTRINQ8IVI9 506 aa16.42■□□□□ 0.22
VLDLR-202ENST00000382099 DIS3L2Q8IYB7 885 aaKnown RBP16.42■□□□□ 0.22
VLDLR-202ENST00000382099 MTFR1LQ9H019 292 aa16.42■□□□□ 0.22
VLDLR-202ENST00000382099 DDX21Q9NR30 783 aaKnown RBP eCLIP16.42■□□□□ 0.22
VLDLR-202ENST00000382099 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.42■□□□□ 0.22
VLDLR-202ENST00000382099 JCADQ9P266 1359 aa16.42■□□□□ 0.22
VLDLR-202ENST00000382099 SMAPO00193 183 aa16.41■□□□□ 0.22
VLDLR-202ENST00000382099 PEX5P50542 639 aa16.41■□□□□ 0.22
VLDLR-202ENST00000382099 INF2Q27J81 1249 aa16.41■□□□□ 0.22
VLDLR-202ENST00000382099 KCNMB3Q9NPA1 279 aa16.41■□□□□ 0.22
VLDLR-202ENST00000382099 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.41■□□□□ 0.22
VLDLR-202ENST00000382099 SUPT3HO75486 399 aa16.41■□□□□ 0.22
VLDLR-202ENST00000382099 DHX9Q08211 1270 aaKnown RBP16.41■□□□□ 0.22
VLDLR-202ENST00000382099 MKRN4PQ13434 485 aaPredicted RBP16.41■□□□□ 0.22
VLDLR-202ENST00000382099 AGBL2Q5U5Z8 902 aa16.41■□□□□ 0.22
VLDLR-202ENST00000382099 C1orf131Q8NDD1 294 aaKnown RBP16.41■□□□□ 0.22
VLDLR-202ENST00000382099 TRIM47Q96LD4 638 aa16.41■□□□□ 0.22
VLDLR-202ENST00000382099 DSCC1Q9BVC3 393 aa16.41■□□□□ 0.22
VLDLR-202ENST00000382099 DMAP1Q9NPF5 467 aaPredicted RBP16.41■□□□□ 0.22
VLDLR-202ENST00000382099 ZNF263O14978 683 aa16.41■□□□□ 0.22
VLDLR-202ENST00000382099 FUT4P22083 530 aa16.41■□□□□ 0.22
VLDLR-202ENST00000382099 BPIFB4P59827 614 aa16.41■□□□□ 0.22
VLDLR-202ENST00000382099 HLFQ16534 295 aa16.41■□□□□ 0.22
VLDLR-202ENST00000382099 P3H1Q32P28 736 aa16.41■□□□□ 0.22
VLDLR-202ENST00000382099 LZTS2Q9BRK4 669 aa16.41■□□□□ 0.22
VLDLR-202ENST00000382099 TLR10Q9BXR5 811 aa16.41■□□□□ 0.22
VLDLR-202ENST00000382099 CARD9Q9H257 536 aa16.41■□□□□ 0.22
VLDLR-202ENST00000382099 ATP8A1Q9Y2Q0 1164 aa16.41■□□□□ 0.22
VLDLR-202ENST00000382099 MAFGO15525 162 aa16.4■□□□□ 0.22
VLDLR-202ENST00000382099 PAEPP09466 180 aa16.4■□□□□ 0.22
VLDLR-202ENST00000382099 EIF4BP23588 611 aaKnown RBP16.4■□□□□ 0.22
VLDLR-202ENST00000382099 FLT3P36888 993 aa16.4■□□□□ 0.22
VLDLR-202ENST00000382099 CACNA2D1P54289 1103 aa16.4■□□□□ 0.22
VLDLR-202ENST00000382099 ERVK-9P63128 1117 aa16.4■□□□□ 0.22
VLDLR-202ENST00000382099 MCL1Q07820 350 aa16.4■□□□□ 0.22
VLDLR-202ENST00000382099 EHHADHQ08426 723 aa16.4■□□□□ 0.22
VLDLR-202ENST00000382099 LRRC14Q15048 493 aa16.4■□□□□ 0.22
VLDLR-202ENST00000382099 DPH5Q9H2P9 285 aa16.4■□□□□ 0.22
VLDLR-202ENST00000382099 GDAQ9Y2T3 454 aa16.4■□□□□ 0.22
VLDLR-202ENST00000382099 MED1Q15648 1581 aaPredicted RBP16.4■□□□□ 0.22
VLDLR-202ENST00000382099 KDM3BQ7LBC6 1761 aa16.4■□□□□ 0.22
VLDLR-202ENST00000382099 A0A087X0B3 334 aa16.4■□□□□ 0.22
VLDLR-202ENST00000382099 OVOS2A0A0G2JMS6 1433 aa16.4■□□□□ 0.22
VLDLR-202ENST00000382099 ASAP2O43150 1006 aa16.4■□□□□ 0.22
VLDLR-202ENST00000382099 NR5A1Q13285 461 aa16.4■□□□□ 0.22
VLDLR-202ENST00000382099 APBB1IPQ7Z5R6 666 aaPredicted RBP16.4■□□□□ 0.22
VLDLR-202ENST00000382099 APLFQ8IW19 511 aaPredicted RBP16.4■□□□□ 0.22
VLDLR-202ENST00000382099 KBTBD3Q8NAB2 608 aa16.4■□□□□ 0.22
VLDLR-202ENST00000382099 NOX5Q96PH1 765 aa16.4■□□□□ 0.22
VLDLR-202ENST00000382099 GSDMAQ96QA5 445 aa16.4■□□□□ 0.22
VLDLR-202ENST00000382099 TRIM7Q9C029 511 aa16.4■□□□□ 0.22
VLDLR-202ENST00000382099 LRRC4CQ9HCJ2 640 aa16.4■□□□□ 0.22
VLDLR-202ENST00000382099 CABP5Q9NP86 173 aa16.4■□□□□ 0.22
VLDLR-202ENST00000382099 MYH10P35580 1976 aa16.4■□□□□ 0.22
VLDLR-202ENST00000382099 SART1O43290 800 aaKnown RBP16.4■□□□□ 0.22
VLDLR-202ENST00000382099 CALB2P22676 271 aa16.4■□□□□ 0.22
VLDLR-202ENST00000382099 CD151P48509 253 aa16.4■□□□□ 0.22
VLDLR-202ENST00000382099 CHRNA2Q15822 529 aa16.4■□□□□ 0.22
VLDLR-202ENST00000382099 SGSM1Q2NKQ1 1148 aa16.4■□□□□ 0.22
VLDLR-202ENST00000382099 OLFML2BQ68BL8 750 aa16.4■□□□□ 0.22
VLDLR-202ENST00000382099 CCDC85AQ96PX6 553 aaPredicted RBP16.4■□□□□ 0.22
VLDLR-202ENST00000382099 LRRC42Q9Y546 428 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms