RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 NDST4Q9H3R1 872 aa16.47■□□□□ 0.23
CTNS-202ENST00000381870 NLRP2Q9NX02 1062 aa16.47■□□□□ 0.23
CTNS-202ENST00000381870 TIAM2Q8IVF5 1701 aa16.47■□□□□ 0.23
CTNS-202ENST00000381870 KIF1AQ12756 1690 aa16.47■□□□□ 0.23
CTNS-202ENST00000381870 TNNC1P63316 161 aa16.47■□□□□ 0.23
CTNS-202ENST00000381870 ICA1Q05084 483 aa16.47■□□□□ 0.23
CTNS-202ENST00000381870 ADCY2Q08462 1091 aa16.47■□□□□ 0.23
CTNS-202ENST00000381870 NBPF20Q3BBV1 942 aa16.47■□□□□ 0.23
CTNS-202ENST00000381870 CCDC178Q5BJE1 867 aa16.47■□□□□ 0.23
CTNS-202ENST00000381870 FAM133BQ5BKY9 247 aaKnown RBP16.47■□□□□ 0.23
CTNS-202ENST00000381870 MEI1Q5TIA1 1274 aa16.47■□□□□ 0.23
CTNS-202ENST00000381870 LRRC45Q96CN5 670 aa16.47■□□□□ 0.23
CTNS-202ENST00000381870 L3MBTL3Q96JM7 780 aaPredicted RBP16.47■□□□□ 0.23
CTNS-202ENST00000381870 ZNF512BQ96KM6 892 aaPredicted RBP16.47■□□□□ 0.23
CTNS-202ENST00000381870 AP1G2O75843 785 aa16.46■□□□□ 0.23
CTNS-202ENST00000381870 SMNDC1O75940 238 aaKnown RBP eCLIP16.46■□□□□ 0.23
CTNS-202ENST00000381870 ITGA6P23229 1130 aa16.46■□□□□ 0.23
CTNS-202ENST00000381870 NLRP5P59047 1200 aa16.46■□□□□ 0.23
CTNS-202ENST00000381870 PDE4DQ08499 809 aa16.46■□□□□ 0.23
CTNS-202ENST00000381870 VWA3BQ502W6 1294 aa16.46■□□□□ 0.23
CTNS-202ENST00000381870 TDRD12Q587J7 1177 aaKnown RBP16.46■□□□□ 0.23
CTNS-202ENST00000381870 MIS18BP1Q6P0N0 1132 aa16.46■□□□□ 0.23
CTNS-202ENST00000381870 ENAHQ8N8S7 591 aaPredicted RBP16.46■□□□□ 0.23
CTNS-202ENST00000381870 XPO6Q96QU8 1125 aaKnown RBP16.46■□□□□ 0.23
CTNS-202ENST00000381870 KBTBD4Q9NVX7 518 aa16.46■□□□□ 0.23
CTNS-202ENST00000381870 RTL9Q8NET4 1388 aa16.46■□□□□ 0.23
CTNS-202ENST00000381870 BICDL2A1A5D9 508 aa16.46■□□□□ 0.23
CTNS-202ENST00000381870 CYP27B1O15528 508 aa16.46■□□□□ 0.23
CTNS-202ENST00000381870 DIAPH2O60879 1101 aa16.46■□□□□ 0.23
CTNS-202ENST00000381870 KLRC1P26715 233 aa16.46■□□□□ 0.23
CTNS-202ENST00000381870 CABP4P57796 275 aa16.46■□□□□ 0.23
CTNS-202ENST00000381870 KRT71Q3SY84 523 aa16.46■□□□□ 0.23
CTNS-202ENST00000381870 HGSNATQ68CP4 663 aa16.46■□□□□ 0.23
CTNS-202ENST00000381870 SPDYE1Q8NFV5 336 aaPredicted RBP16.46■□□□□ 0.23
CTNS-202ENST00000381870 ACSBG1Q96GR2 724 aa16.46■□□□□ 0.23
CTNS-202ENST00000381870 NUP188Q5SRE5 1749 aa16.46■□□□□ 0.22
CTNS-202ENST00000381870 BAZ2BQ9UIF8 2168 aaKnown RBP16.46■□□□□ 0.22
CTNS-202ENST00000381870 ANKRD33BA6NCL7 494 aa16.45■□□□□ 0.22
CTNS-202ENST00000381870 MINDY4BA8MYZ0 360 aa16.45■□□□□ 0.22
CTNS-202ENST00000381870 CTNND1O60716 968 aaKnown RBP16.45■□□□□ 0.22
CTNS-202ENST00000381870 RIPK1Q13546 671 aa16.45■□□□□ 0.22
CTNS-202ENST00000381870 ERMARDQ5T6L9 678 aa16.45■□□□□ 0.22
CTNS-202ENST00000381870 ARL6IP4Q66PJ3 421 aaKnown RBP16.45■□□□□ 0.22
CTNS-202ENST00000381870 CNNM1Q9NRU3 951 aa16.45■□□□□ 0.22
CTNS-202ENST00000381870 TMEM59LQ9UK28 342 aa16.45■□□□□ 0.22
CTNS-202ENST00000381870 AGAP1Q9UPQ3 857 aa16.45■□□□□ 0.22
CTNS-202ENST00000381870 CAMTA1Q9Y6Y1 1673 aa16.45■□□□□ 0.22
CTNS-202ENST00000381870 CUL1Q13616 776 aa16.45■□□□□ 0.22
CTNS-202ENST00000381870 PDXDC1Q6P996 788 aa16.45■□□□□ 0.22
CTNS-202ENST00000381870 MIGA1Q8NAN2 632 aa16.45■□□□□ 0.22
CTNS-202ENST00000381870 DCAF5Q96JK2 942 aa16.45■□□□□ 0.22
CTNS-202ENST00000381870 PSMD1Q99460 953 aa16.45■□□□□ 0.22
CTNS-202ENST00000381870 AP1M1Q9BXS5 423 aa16.45■□□□□ 0.22
CTNS-202ENST00000381870 NACAP1Q9BZK3 213 aa16.45■□□□□ 0.22
CTNS-202ENST00000381870 SEMA6BQ9H3T3 888 aa16.45■□□□□ 0.22
CTNS-202ENST00000381870 TRAPPC10P48553 1259 aa16.44■□□□□ 0.22
CTNS-202ENST00000381870 KCNJ2P63252 427 aa16.44■□□□□ 0.22
CTNS-202ENST00000381870 PTPROQ16827 1216 aa16.44■□□□□ 0.22
CTNS-202ENST00000381870 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.44■□□□□ 0.22
CTNS-202ENST00000381870 PRCCQ92733 491 aaPredicted RBP16.44■□□□□ 0.22
CTNS-202ENST00000381870 ZNF317Q96PQ6 595 aaPredicted RBP16.44■□□□□ 0.22
CTNS-202ENST00000381870 FAM129AQ9BZQ8 928 aa16.44■□□□□ 0.22
CTNS-202ENST00000381870 YIPF3Q9GZM5 350 aa16.44■□□□□ 0.22
CTNS-202ENST00000381870 ETAA1Q9NY74 926 aa16.44■□□□□ 0.22
CTNS-202ENST00000381870 SWAP70Q9UH65 585 aa16.44■□□□□ 0.22
CTNS-202ENST00000381870 PNMA2Q9UL42 364 aa16.44■□□□□ 0.22
CTNS-202ENST00000381870 GLI3P10071 1580 aa16.44■□□□□ 0.22
CTNS-202ENST00000381870 KCNK3O14649 394 aa16.44■□□□□ 0.22
CTNS-202ENST00000381870 CSF1RP07333 972 aa16.44■□□□□ 0.22
CTNS-202ENST00000381870 ARID4AP29374 1257 aaPredicted RBP16.44■□□□□ 0.22
CTNS-202ENST00000381870 PPP2R5BQ15173 497 aa16.44■□□□□ 0.22
CTNS-202ENST00000381870 NAB2Q15742 525 aa16.44■□□□□ 0.22
CTNS-202ENST00000381870 FAM43BQ6ZT52 329 aaPredicted RBP16.44■□□□□ 0.22
CTNS-202ENST00000381870 CATIPQ7Z7H3 387 aa16.44■□□□□ 0.22
CTNS-202ENST00000381870 STAG2Q8N3U4 1231 aa16.44■□□□□ 0.22
CTNS-202ENST00000381870 VGLL2Q8N8G2 317 aa16.44■□□□□ 0.22
CTNS-202ENST00000381870 IQCDQ96DY2 449 aa16.44■□□□□ 0.22
CTNS-202ENST00000381870 MTA3Q9BTC8 594 aa16.44■□□□□ 0.22
CTNS-202ENST00000381870 ISCA1Q9BUE6 129 aa16.44■□□□□ 0.22
CTNS-202ENST00000381870 TMEM60Q9H2L4 133 aa16.44■□□□□ 0.22
CTNS-202ENST00000381870 GREM2Q9H772 168 aa16.44■□□□□ 0.22
CTNS-202ENST00000381870 NLRC4Q9NPP4 1024 aa16.44■□□□□ 0.22
CTNS-202ENST00000381870 NOP53Q9NZM5 478 aaKnown RBP16.44■□□□□ 0.22
CTNS-202ENST00000381870 MEGF6O75095 1541 aa16.44■□□□□ 0.22
CTNS-202ENST00000381870 GSTA1P08263 222 aa16.43■□□□□ 0.22
CTNS-202ENST00000381870 UBA7P41226 1012 aa16.43■□□□□ 0.22
CTNS-202ENST00000381870 THEMIS2Q5TEJ8 643 aa16.43■□□□□ 0.22
CTNS-202ENST00000381870 DTHD1Q6ZMT9 781 aa16.43■□□□□ 0.22
CTNS-202ENST00000381870 CACNA2D4Q7Z3S7 1137 aa16.43■□□□□ 0.22
CTNS-202ENST00000381870 SRBD1Q8N5C6 995 aaKnown RBP16.43■□□□□ 0.22
CTNS-202ENST00000381870 ANKS4BQ8N8V4 417 aa16.43■□□□□ 0.22
CTNS-202ENST00000381870 CCDC26Q8TAB7 109 aa16.43■□□□□ 0.22
CTNS-202ENST00000381870 RASGRP4Q8TDF6 673 aa16.43■□□□□ 0.22
CTNS-202ENST00000381870 CALR3Q96L12 384 aaKnown RBP16.43■□□□□ 0.22
CTNS-202ENST00000381870 PACSIN1Q9BY11 444 aa16.43■□□□□ 0.22
CTNS-202ENST00000381870 GOLPH3Q9H4A6 298 aa16.43■□□□□ 0.22
CTNS-202ENST00000381870 RNF41Q9H4P4 317 aaPredicted RBP16.43■□□□□ 0.22
CTNS-202ENST00000381870 KCNMB3Q9NPA1 279 aa16.43■□□□□ 0.22
CTNS-202ENST00000381870 SLC5A4Q9NY91 659 aa16.43■□□□□ 0.22
CTNS-202ENST00000381870 ZNF330Q9Y3S2 320 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms