RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 TFAP4Q01664 338 aa11.66□□□□□ -0.54
CLCN4-202ENST00000380833 MIGA2Q7L4E1 593 aa11.66□□□□□ -0.54
CLCN4-202ENST00000380833 G2E3Q7L622 706 aa11.66□□□□□ -0.54
CLCN4-202ENST00000380833 HACE1Q8IYU2 909 aa11.66□□□□□ -0.54
CLCN4-202ENST00000380833 SDR42E1Q8WUS8 393 aa11.66□□□□□ -0.54
CLCN4-202ENST00000380833 PRELID1Q9Y255 219 aa11.66□□□□□ -0.54
CLCN4-202ENST00000380833 XPOTO43592 962 aaKnown RBP11.65□□□□□ -0.54
CLCN4-202ENST00000380833 ARPC4P59998 168 aa11.65□□□□□ -0.54
CLCN4-202ENST00000380833 DNAJC10Q8IXB1 793 aa11.65□□□□□ -0.54
CLCN4-202ENST00000380833 CCDC105Q8IYK2 499 aa11.65□□□□□ -0.54
CLCN4-202ENST00000380833 FTOQ9C0B1 505 aaKnown RBP eCLIP11.65□□□□□ -0.54
CLCN4-202ENST00000380833 KRT82Q9NSB4 513 aa11.65□□□□□ -0.54
CLCN4-202ENST00000380833 DNAJC17Q9NVM6 304 aaKnown RBP11.65□□□□□ -0.54
CLCN4-202ENST00000380833 DISP3Q9P2K9 1392 aa11.65□□□□□ -0.54
CLCN4-202ENST00000380833 SERPINB10P48595 397 aa11.65□□□□□ -0.54
CLCN4-202ENST00000380833 SNAP25P60880 206 aa11.65□□□□□ -0.54
CLCN4-202ENST00000380833 FAM81AQ8TBF8 368 aa11.65□□□□□ -0.54
CLCN4-202ENST00000380833 DISC1Q9NRI5 854 aa11.65□□□□□ -0.54
CLCN4-202ENST00000380833 LMCD1Q9NZU5 365 aa11.65□□□□□ -0.54
CLCN4-202ENST00000380833 TRAF3IP3Q9Y228 551 aa11.65□□□□□ -0.54
CLCN4-202ENST00000380833 H0Y3Z8 333 aa11.65□□□□□ -0.54
CLCN4-202ENST00000380833 HSPA9P38646 679 aaKnown RBP11.65□□□□□ -0.54
CLCN4-202ENST00000380833 ATP8B2P98198 1209 aa11.65□□□□□ -0.54
CLCN4-202ENST00000380833 HAUS3Q68CZ6 603 aa11.65□□□□□ -0.54
CLCN4-202ENST00000380833 ZNF467Q7Z7K2 595 aaPredicted RBP11.65□□□□□ -0.54
CLCN4-202ENST00000380833 CCDC127Q96BQ5 260 aa11.65□□□□□ -0.54
CLCN4-202ENST00000380833 CCDC124Q96CT7 223 aaKnown RBP11.65□□□□□ -0.54
CLCN4-202ENST00000380833 LGR6Q9HBX8 967 aa11.65□□□□□ -0.54
CLCN4-202ENST00000380833 LRWD1Q9UFC0 647 aa11.65□□□□□ -0.54
CLCN4-202ENST00000380833 SYCE1LA8MT33 242 aa11.65□□□□□ -0.54
CLCN4-202ENST00000380833 SERPINB4P48594 390 aa11.65□□□□□ -0.54
CLCN4-202ENST00000380833 KRT33BQ14525 404 aa11.65□□□□□ -0.54
CLCN4-202ENST00000380833 GET4Q7L5D6 327 aaPredicted RBP11.65□□□□□ -0.54
CLCN4-202ENST00000380833 WDR48Q8TAF3 677 aa11.65□□□□□ -0.54
CLCN4-202ENST00000380833 GDAP1Q8TB36 358 aa11.65□□□□□ -0.54
CLCN4-202ENST00000380833 FAM227BQ96M60 508 aa11.65□□□□□ -0.54
CLCN4-202ENST00000380833 MTA3Q9BTC8 594 aa11.65□□□□□ -0.54
CLCN4-202ENST00000380833 DBNDD1Q9H9R9 158 aa11.65□□□□□ -0.54
CLCN4-202ENST00000380833 SLC5A4Q9NY91 659 aa11.65□□□□□ -0.54
CLCN4-202ENST00000380833 EMC3Q9P0I2 261 aa11.65□□□□□ -0.54
CLCN4-202ENST00000380833 CCDC157Q569K6 752 aa11.65□□□□□ -0.54
CLCN4-202ENST00000380833 PDXDC1Q6P996 788 aa11.65□□□□□ -0.54
CLCN4-202ENST00000380833 DDHD1Q8NEL9 900 aa11.65□□□□□ -0.54
CLCN4-202ENST00000380833 ITFG2Q969R8 447 aa11.65□□□□□ -0.54
CLCN4-202ENST00000380833 TRIM8Q9BZR9 551 aa11.65□□□□□ -0.54
CLCN4-202ENST00000380833 QTRT2Q9H974 415 aaKnown RBP11.65□□□□□ -0.54
CLCN4-202ENST00000380833 CCPG1Q9ULG6 757 aa11.65□□□□□ -0.54
CLCN4-202ENST00000380833 GPAA1O43292 621 aa11.65□□□□□ -0.55
CLCN4-202ENST00000380833 ADCY2Q08462 1091 aa11.65□□□□□ -0.55
CLCN4-202ENST00000380833 RSAD2Q8WXG1 361 aa11.65□□□□□ -0.55
CLCN4-202ENST00000380833 ATP6V1E2Q96A05 226 aa11.65□□□□□ -0.55
CLCN4-202ENST00000380833 CCDC51Q96ER9 411 aa11.65□□□□□ -0.55
CLCN4-202ENST00000380833 MAML3Q96JK9 1138 aa11.65□□□□□ -0.55
CLCN4-202ENST00000380833 FAM207AQ9NSI2 230 aaPredicted RBP11.65□□□□□ -0.55
CLCN4-202ENST00000380833 TMEM63CQ9P1W3 806 aa11.65□□□□□ -0.55
CLCN4-202ENST00000380833 WDR97A6NE52 1622 aa11.64□□□□□ -0.55
CLCN4-202ENST00000380833 KCNA6P17658 529 aa11.64□□□□□ -0.55
CLCN4-202ENST00000380833 TECP42680 631 aa11.64□□□□□ -0.55
CLCN4-202ENST00000380833 RCN2Q14257 317 aa11.64□□□□□ -0.55
CLCN4-202ENST00000380833 CYTH2Q99418 400 aa11.64□□□□□ -0.55
CLCN4-202ENST00000380833 EYA1Q99502 592 aa11.64□□□□□ -0.55
CLCN4-202ENST00000380833 RPAP3Q9H6T3 665 aaPredicted RBP11.64□□□□□ -0.55
CLCN4-202ENST00000380833 TARSL2A2RTX5 802 aaKnown RBP11.64□□□□□ -0.55
CLCN4-202ENST00000380833 MEFVO15553 781 aaPredicted RBP11.64□□□□□ -0.55
CLCN4-202ENST00000380833 RAD17O75943 681 aa11.64□□□□□ -0.55
CLCN4-202ENST00000380833 ZAP70P43403 619 aa11.64□□□□□ -0.55
CLCN4-202ENST00000380833 ANO4Q32M45 955 aa11.64□□□□□ -0.55
CLCN4-202ENST00000380833 UBL4BQ8N7F7 174 aa11.64□□□□□ -0.55
CLCN4-202ENST00000380833 TNIP2Q8NFZ5 429 aa11.64□□□□□ -0.55
CLCN4-202ENST00000380833 GPKOWQ92917 476 aaPredicted RBP eCLIP11.64□□□□□ -0.55
CLCN4-202ENST00000380833 KLHL25Q9H0H3 589 aa11.64□□□□□ -0.55
CLCN4-202ENST00000380833 PDP2Q9P2J9 529 aa11.64□□□□□ -0.55
CLCN4-202ENST00000380833 CAPN11Q9UMQ6 739 aa11.64□□□□□ -0.55
CLCN4-202ENST00000380833 HYOU1Q9Y4L1 999 aa11.64□□□□□ -0.55
CLCN4-202ENST00000380833 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.64□□□□□ -0.55
CLCN4-202ENST00000380833 EHBP1L1Q8N3D4 1523 aa11.64□□□□□ -0.55
CLCN4-202ENST00000380833 AP2B1P63010 937 aa11.64□□□□□ -0.55
CLCN4-202ENST00000380833 ATL3Q6DD88 541 aa11.64□□□□□ -0.55
CLCN4-202ENST00000380833 SZRD1Q7Z422 152 aa11.64□□□□□ -0.55
CLCN4-202ENST00000380833 GAS2L3Q86XJ1 694 aa11.64□□□□□ -0.55
CLCN4-202ENST00000380833 SEPT9Q9UHD8 586 aaPredicted RBP11.64□□□□□ -0.55
CLCN4-202ENST00000380833 ORC6Q9Y5N6 252 aa11.64□□□□□ -0.55
CLCN4-202ENST00000380833 STK24Q9Y6E0 443 aa11.64□□□□□ -0.55
CLCN4-202ENST00000380833 K7ENM7 598 aa11.64□□□□□ -0.55
CLCN4-202ENST00000380833 MAPK13O15264 365 aa11.64□□□□□ -0.55
CLCN4-202ENST00000380833 PEX14O75381 377 aa11.64□□□□□ -0.55
CLCN4-202ENST00000380833 LCA5LO95447 670 aa11.64□□□□□ -0.55
CLCN4-202ENST00000380833 PECAM1P16284 738 aaPredicted RBP11.64□□□□□ -0.55
CLCN4-202ENST00000380833 CEP85Q6P2H3 762 aa11.64□□□□□ -0.55
CLCN4-202ENST00000380833 NUP58Q9BVL2 599 aa11.64□□□□□ -0.55
CLCN4-202ENST00000380833 ZMYND8Q9ULU4 1186 aaPredicted RBP11.64□□□□□ -0.55
CLCN4-202ENST00000380833 TBKBP1A7MCY6 615 aa11.64□□□□□ -0.55
CLCN4-202ENST00000380833 CYP4A11Q02928 519 aa11.64□□□□□ -0.55
CLCN4-202ENST00000380833 ADCY1Q08828 1119 aa11.64□□□□□ -0.55
CLCN4-202ENST00000380833 TTBK2Q6IQ55 1244 aa11.64□□□□□ -0.55
CLCN4-202ENST00000380833 POTEEQ6S8J3 1075 aa11.64□□□□□ -0.55
CLCN4-202ENST00000380833 SUGP1Q8IWZ8 645 aaKnown RBP11.64□□□□□ -0.55
CLCN4-202ENST00000380833 EFHD2Q96C19 240 aaPredicted RBP11.64□□□□□ -0.55
CLCN4-202ENST00000380833 TUBGCP3Q96CW5 907 aa11.64□□□□□ -0.55
CLCN4-202ENST00000380833 HDAC11Q96DB2 347 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms