RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 TRDNQ13061 729 aa26.83■■□□□ 1.89
U2AF1-202ENST00000380276 CYB5R4Q7L1T6 521 aa26.83■■□□□ 1.89
U2AF1-202ENST00000380276 EXOC6Q8TAG9 804 aa26.83■■□□□ 1.89
U2AF1-202ENST00000380276 COG5Q9UP83 839 aa26.83■■□□□ 1.89
U2AF1-202ENST00000380276 PPP1R11O60927 126 aaPredicted RBP26.82■■□□□ 1.88
U2AF1-202ENST00000380276 RBL2Q08999 1139 aa26.82■■□□□ 1.88
U2AF1-202ENST00000380276 IKBKEQ14164 716 aa26.82■■□□□ 1.88
U2AF1-202ENST00000380276 ZNF618Q5T7W0 954 aa26.82■■□□□ 1.88
U2AF1-202ENST00000380276 KCNV1Q6PIU1 500 aa26.82■■□□□ 1.88
U2AF1-202ENST00000380276 FCHSD1Q86WN1 690 aa26.82■■□□□ 1.88
U2AF1-202ENST00000380276 MAD2L2Q9UI95 211 aa26.82■■□□□ 1.88
U2AF1-202ENST00000380276 PRRC2BQ5JSZ5 2229 aaKnown RBP26.81■■□□□ 1.88
U2AF1-202ENST00000380276 ABHD14A-ACY1A0A1B0GW23 586 aa26.81■■□□□ 1.88
U2AF1-202ENST00000380276 RBAK-RBAKDNI3L0D1 243 aa26.81■■□□□ 1.88
U2AF1-202ENST00000380276 CXCL10P02778 98 aa26.81■■□□□ 1.88
U2AF1-202ENST00000380276 CCND2P30279 289 aa26.81■■□□□ 1.88
U2AF1-202ENST00000380276 PGM5Q15124 567 aa26.81■■□□□ 1.88
U2AF1-202ENST00000380276 SEC23AQ15436 765 aa26.81■■□□□ 1.88
U2AF1-202ENST00000380276 TCTN1Q2MV58 587 aa26.81■■□□□ 1.88
U2AF1-202ENST00000380276 HSDL1Q3SXM5 330 aa26.81■■□□□ 1.88
U2AF1-202ENST00000380276 IL31RAQ8NI17 732 aa26.81■■□□□ 1.88
U2AF1-202ENST00000380276 HLA-CQ95604 372 aa26.81■■□□□ 1.88
U2AF1-202ENST00000380276 MLXIPQ9HAP2 919 aa26.81■■□□□ 1.88
U2AF1-202ENST00000380276 ERICH2A1L162 156 aa26.8■■□□□ 1.88
U2AF1-202ENST00000380276 GCOM1H8Y6P7 765 aaPredicted RBP26.8■■□□□ 1.88
U2AF1-202ENST00000380276 HAS3O00219 553 aa26.8■■□□□ 1.88
U2AF1-202ENST00000380276 POLR2MP0CAP2 368 aa26.8■■□□□ 1.88
U2AF1-202ENST00000380276 CELF3Q5SZQ8 465 aaKnown RBP26.8■■□□□ 1.88
U2AF1-202ENST00000380276 MYSM1Q5VVJ2 828 aa26.8■■□□□ 1.88
U2AF1-202ENST00000380276 WNT8BQ93098 351 aa26.8■■□□□ 1.88
U2AF1-202ENST00000380276 PIGSQ96S52 555 aa26.8■■□□□ 1.88
U2AF1-202ENST00000380276 IL25Q9H293 177 aa26.8■■□□□ 1.88
U2AF1-202ENST00000380276 MAP3K20Q9NYL2 800 aaKnown RBP26.8■■□□□ 1.88
U2AF1-202ENST00000380276 EFCAB14O75071 495 aa26.79■■□□□ 1.88
U2AF1-202ENST00000380276 PPFIA4O75335 1185 aa26.79■■□□□ 1.88
U2AF1-202ENST00000380276 RGS20O76081 388 aa26.79■■□□□ 1.88
U2AF1-202ENST00000380276 STOX1Q6ZVD7 989 aa26.79■■□□□ 1.88
U2AF1-202ENST00000380276 RAD9AQ99638 391 aa26.79■■□□□ 1.88
U2AF1-202ENST00000380276 PALM3A6NDB9 673 aaPredicted RBP26.78■■□□□ 1.88
U2AF1-202ENST00000380276 IFIT3O14879 490 aaKnown RBP26.78■■□□□ 1.88
U2AF1-202ENST00000380276 GJB5O95377 273 aa26.78■■□□□ 1.88
U2AF1-202ENST00000380276 UBA1P22314 1058 aaKnown RBP26.78■■□□□ 1.88
U2AF1-202ENST00000380276 THPOP40225 353 aa26.78■■□□□ 1.88
U2AF1-202ENST00000380276 TRAF1Q13077 416 aa26.78■■□□□ 1.88
U2AF1-202ENST00000380276 TRIM71Q2Q1W2 868 aaKnown RBP26.78■■□□□ 1.88
U2AF1-202ENST00000380276 VSIG10LQ86VR7 867 aa26.78■■□□□ 1.88
U2AF1-202ENST00000380276 PIBF1Q8WXW3 757 aa26.78■■□□□ 1.88
U2AF1-202ENST00000380276 MTMR8Q96EF0 704 aa26.78■■□□□ 1.88
U2AF1-202ENST00000380276 TGS1Q96RS0 853 aaKnown RBP26.78■■□□□ 1.88
U2AF1-202ENST00000380276 MUC3AQ02505 3323 aa26.78■■□□□ 1.88
U2AF1-202ENST00000380276 LPXNO60711 386 aa26.77■■□□□ 1.88
U2AF1-202ENST00000380276 LGR5O75473 907 aa26.77■■□□□ 1.88
U2AF1-202ENST00000380276 GHRHRQ02643 423 aa26.77■■□□□ 1.88
U2AF1-202ENST00000380276 GRM4Q14833 912 aa26.77■■□□□ 1.88
U2AF1-202ENST00000380276 RALYLQ86SE5 291 aaKnown RBP26.77■■□□□ 1.88
U2AF1-202ENST00000380276 GPKOWQ92917 476 aaPredicted RBP eCLIP26.77■■□□□ 1.88
U2AF1-202ENST00000380276 C17orf102A2RUQ5 167 aa26.76■■□□□ 1.87
U2AF1-202ENST00000380276 NOP56O00567 594 aaKnown RBP26.76■■□□□ 1.87
U2AF1-202ENST00000380276 SP2Q02086 613 aa26.76■■□□□ 1.87
U2AF1-202ENST00000380276 HIC1Q14526 733 aa26.76■■□□□ 1.87
U2AF1-202ENST00000380276 MYOCDQ8IZQ8 938 aa26.76■■□□□ 1.87
U2AF1-202ENST00000380276 SAMD3Q8N6K7 520 aa26.76■■□□□ 1.87
U2AF1-202ENST00000380276 REV3LO60673 3130 aa26.75■■□□□ 1.87
U2AF1-202ENST00000380276 EMSYQ7Z589 1322 aa26.75■■□□□ 1.87
U2AF1-202ENST00000380276 LINC01553A4QN01 128 aa26.75■■□□□ 1.87
U2AF1-202ENST00000380276 RSPH10B2B2RC85 870 aa26.75■■□□□ 1.87
U2AF1-202ENST00000380276 AMHP03971 560 aa26.75■■□□□ 1.87
U2AF1-202ENST00000380276 RSPH10BP0C881 870 aa26.75■■□□□ 1.87
U2AF1-202ENST00000380276 MBTPS1Q14703 1052 aa26.75■■□□□ 1.87
U2AF1-202ENST00000380276 WTAPQ15007 396 aa26.75■■□□□ 1.87
U2AF1-202ENST00000380276 TRAF7Q6Q0C0 670 aa26.75■■□□□ 1.87
U2AF1-202ENST00000380276 PPP4R3CPQ6ZMV5 832 aa26.75■■□□□ 1.87
U2AF1-202ENST00000380276 LIN28BQ6ZN17 250 aaKnown RBP eCLIP26.75■■□□□ 1.87
U2AF1-202ENST00000380276 ATP6V0A1Q93050 837 aa26.75■■□□□ 1.87
U2AF1-202ENST00000380276 U3KPZ7 1027 aaPredicted RBP26.75■■□□□ 1.87
U2AF1-202ENST00000380276 TGFB3P10600 412 aa26.74■■□□□ 1.87
U2AF1-202ENST00000380276 HOXD8P13378 290 aaPredicted RBP26.74■■□□□ 1.87
U2AF1-202ENST00000380276 SART3Q15020 963 aaKnown RBP26.74■■□□□ 1.87
U2AF1-202ENST00000380276 GNPTABQ3T906 1256 aa26.74■■□□□ 1.87
U2AF1-202ENST00000380276 DBF4BQ8NFT6 615 aa26.74■■□□□ 1.87
U2AF1-202ENST00000380276 RUFY2Q8WXA3 655 aa26.74■■□□□ 1.87
U2AF1-202ENST00000380276 C16orf70Q9BSU1 422 aa26.74■■□□□ 1.87
U2AF1-202ENST00000380276 C1QTNF1Q9BXJ1 281 aa26.74■■□□□ 1.87
U2AF1-202ENST00000380276 SUGCTQ9HAC7 445 aa26.74■■□□□ 1.87
U2AF1-202ENST00000380276 H3BRB1 525 aa26.73■■□□□ 1.87
U2AF1-202ENST00000380276 ERVK-21P61565 698 aa26.73■■□□□ 1.87
U2AF1-202ENST00000380276 SLC35G1Q2M3R5 365 aa26.73■■□□□ 1.87
U2AF1-202ENST00000380276 SERINC5Q86VE9 423 aa26.73■■□□□ 1.87
U2AF1-202ENST00000380276 TUT1Q9H6E5 874 aaKnown RBP26.73■■□□□ 1.87
U2AF1-202ENST00000380276 RIOX1Q9H6W3 641 aa26.73■■□□□ 1.87
U2AF1-202ENST00000380276 SENP2Q9HC62 589 aa26.73■■□□□ 1.87
U2AF1-202ENST00000380276 LMCD1Q9NZU5 365 aa26.73■■□□□ 1.87
U2AF1-202ENST00000380276 PNMA6FA0A0J9YX94 578 aa26.72■■□□□ 1.87
U2AF1-202ENST00000380276 LGALS2P05162 132 aa26.72■■□□□ 1.87
U2AF1-202ENST00000380276 CYP21A2P08686 494 aa26.72■■□□□ 1.87
U2AF1-202ENST00000380276 CTSHP09668 335 aa26.72■■□□□ 1.87
U2AF1-202ENST00000380276 SMIM10L2AP0DMW4 78 aa26.72■■□□□ 1.87
U2AF1-202ENST00000380276 SMIM10L2BP0DMW5 78 aa26.72■■□□□ 1.87
U2AF1-202ENST00000380276 GSPT1P15170 499 aaKnown RBP26.72■■□□□ 1.87
U2AF1-202ENST00000380276 TTC22Q5TAA0 569 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms