RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 CRHR2Q13324 411 aa7.22□□□□□ -1.25
NEDD9-202ENST00000379446 COL9A3Q14050 684 aaPredicted RBP7.22□□□□□ -1.25
NEDD9-202ENST00000379446 CALCRLQ16602 461 aa7.22□□□□□ -1.25
NEDD9-202ENST00000379446 TDRD12Q587J7 1177 aaKnown RBP7.22□□□□□ -1.25
NEDD9-202ENST00000379446 CCDC70Q6NSX1 233 aa7.22□□□□□ -1.25
NEDD9-202ENST00000379446 TACC3Q9Y6A5 838 aa7.22□□□□□ -1.25
NEDD9-202ENST00000379446 KNDC1Q76NI1 1749 aa7.22□□□□□ -1.25
NEDD9-202ENST00000379446 TNNC2P02585 160 aa7.22□□□□□ -1.25
NEDD9-202ENST00000379446 AKR1B1P15121 316 aa7.22□□□□□ -1.25
NEDD9-202ENST00000379446 ADORA2AP29274 412 aa7.22□□□□□ -1.25
NEDD9-202ENST00000379446 NFIAQ12857 509 aa7.22□□□□□ -1.25
NEDD9-202ENST00000379446 PPP2R5AQ15172 486 aa7.22□□□□□ -1.25
NEDD9-202ENST00000379446 PGBD1Q96JS3 809 aa7.22□□□□□ -1.25
NEDD9-202ENST00000379446 CLSTN2Q9H4D0 955 aa7.22□□□□□ -1.25
NEDD9-202ENST00000379446 RNF186Q9NXI6 227 aa7.22□□□□□ -1.25
NEDD9-202ENST00000379446 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.22□□□□□ -1.25
NEDD9-202ENST00000379446 CDHR2Q9BYE9 1310 aa7.22□□□□□ -1.25
NEDD9-202ENST00000379446 A0A1B0GVL5 298 aa7.22□□□□□ -1.25
NEDD9-202ENST00000379446 IGKV5-2P06315 115 aa7.22□□□□□ -1.25
NEDD9-202ENST00000379446 KRT5P13647 590 aa7.22□□□□□ -1.25
NEDD9-202ENST00000379446 UBE3CQ15386 1083 aa7.22□□□□□ -1.25
NEDD9-202ENST00000379446 STX1AQ16623 288 aa7.22□□□□□ -1.25
NEDD9-202ENST00000379446 HSP90AA4PQ58FG1 418 aa7.22□□□□□ -1.25
NEDD9-202ENST00000379446 SDE2Q6IQ49 451 aa7.22□□□□□ -1.25
NEDD9-202ENST00000379446 CXCL17Q6UXB2 119 aa7.22□□□□□ -1.25
NEDD9-202ENST00000379446 DLK2Q6UY11 383 aa7.22□□□□□ -1.25
NEDD9-202ENST00000379446 CLEC10AQ8IUN9 316 aa7.22□□□□□ -1.25
NEDD9-202ENST00000379446 ZNF654Q8IZM8 581 aa7.22□□□□□ -1.25
NEDD9-202ENST00000379446 KIF18AQ8NI77 898 aa7.22□□□□□ -1.25
NEDD9-202ENST00000379446 SPAG5Q96R06 1193 aa7.22□□□□□ -1.25
NEDD9-202ENST00000379446 PIGSQ96S52 555 aa7.22□□□□□ -1.25
NEDD9-202ENST00000379446 C11orf49Q9H6J7 331 aa7.22□□□□□ -1.25
NEDD9-202ENST00000379446 ANO10Q9NW15 660 aa7.22□□□□□ -1.25
NEDD9-202ENST00000379446 ANKRD26Q9UPS8 1709 aa7.22□□□□□ -1.25
NEDD9-202ENST00000379446 UTYO14607 1347 aa7.22□□□□□ -1.25
NEDD9-202ENST00000379446 NRKQ7Z2Y5 1582 aa7.22□□□□□ -1.25
NEDD9-202ENST00000379446 PHLPP1O60346 1717 aa7.22□□□□□ -1.25
NEDD9-202ENST00000379446 NFKBIEO00221 500 aa7.22□□□□□ -1.25
NEDD9-202ENST00000379446 STRNO43815 780 aa7.22□□□□□ -1.25
NEDD9-202ENST00000379446 CCL5P13501 91 aa7.22□□□□□ -1.25
NEDD9-202ENST00000379446 ZNF75DP51815 510 aa7.22□□□□□ -1.25
NEDD9-202ENST00000379446 BFSP1Q12934 665 aa7.22□□□□□ -1.25
NEDD9-202ENST00000379446 MTMR1Q13613 665 aa7.22□□□□□ -1.25
NEDD9-202ENST00000379446 PRAMEF19Q5SWL8 479 aa7.22□□□□□ -1.25
NEDD9-202ENST00000379446 DHX32Q7L7V1 743 aaKnown RBP7.22□□□□□ -1.25
NEDD9-202ENST00000379446 PROM2Q8N271 834 aa7.22□□□□□ -1.25
NEDD9-202ENST00000379446 SMARCE1Q969G3 411 aa7.22□□□□□ -1.25
NEDD9-202ENST00000379446 NOX5Q96PH1 765 aa7.22□□□□□ -1.25
NEDD9-202ENST00000379446 DBR1Q9UK59 544 aaKnown RBP7.22□□□□□ -1.25
NEDD9-202ENST00000379446 DOLKQ9UPQ8 538 aa7.22□□□□□ -1.25
NEDD9-202ENST00000379446 SKILP12757 684 aa7.21□□□□□ -1.25
NEDD9-202ENST00000379446 SFPQP23246 707 aaKnown RBP eCLIP7.21□□□□□ -1.254e-6■■□□□ 13.1
NEDD9-202ENST00000379446 ACTN2P35609 894 aa7.21□□□□□ -1.25
NEDD9-202ENST00000379446 CAP2P40123 477 aa7.21□□□□□ -1.25
NEDD9-202ENST00000379446 PPIGQ13427 754 aaKnown RBP eCLIP7.21□□□□□ -1.252e-8■■□□□ 11.7
NEDD9-202ENST00000379446 LEKR1Q6ZMV7 388 aa7.21□□□□□ -1.25
NEDD9-202ENST00000379446 PARD3BQ8TEW8 1205 aa7.21□□□□□ -1.25
NEDD9-202ENST00000379446 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.21□□□□□ -1.25
NEDD9-202ENST00000379446 VCPKMTQ9H867 229 aa7.21□□□□□ -1.25
NEDD9-202ENST00000379446 TRPC7Q9HCX4 862 aa7.21□□□□□ -1.25
NEDD9-202ENST00000379446 DPP7Q9UHL4 492 aa7.21□□□□□ -1.25
NEDD9-202ENST00000379446 PTCH2Q9Y6C5 1203 aa7.21□□□□□ -1.25
NEDD9-202ENST00000379446 CYP21A2P08686 494 aa7.21□□□□□ -1.26
NEDD9-202ENST00000379446 ATP5JP18859 108 aa7.21□□□□□ -1.26
NEDD9-202ENST00000379446 DNA2P51530 1060 aa7.21□□□□□ -1.26
NEDD9-202ENST00000379446 HNRNPH2P55795 449 aaKnown RBP7.21□□□□□ -1.26
NEDD9-202ENST00000379446 DCAF17Q5H9S7 520 aaPredicted RBP7.21□□□□□ -1.26
NEDD9-202ENST00000379446 BTBD8Q5XKL5 378 aa7.21□□□□□ -1.26
NEDD9-202ENST00000379446 RCSD1Q6JBY9 416 aa7.21□□□□□ -1.26
NEDD9-202ENST00000379446 TMC6Q7Z403 805 aa7.21□□□□□ -1.26
NEDD9-202ENST00000379446 RHPN2Q8IUC4 686 aa7.21□□□□□ -1.26
NEDD9-202ENST00000379446 NSMCE1Q8WV22 266 aa7.21□□□□□ -1.26
NEDD9-202ENST00000379446 RPGRIP1Q96KN7 1286 aa7.21□□□□□ -1.26
NEDD9-202ENST00000379446 ZSCAN16Q9H4T2 348 aaPredicted RBP7.21□□□□□ -1.26
NEDD9-202ENST00000379446 CWC15Q9P013 229 aaKnown RBP7.21□□□□□ -1.26
NEDD9-202ENST00000379446 PCDHA12Q9UN75 941 aa7.21□□□□□ -1.26
NEDD9-202ENST00000379446 FRMD4BQ9Y2L6 1034 aa7.21□□□□□ -1.26
NEDD9-202ENST00000379446 SYNJ2BP-COX16A0A087WUM0 186 aa7.21□□□□□ -1.26
NEDD9-202ENST00000379446 C17orf102A2RUQ5 167 aa7.21□□□□□ -1.26
NEDD9-202ENST00000379446 VWA3AA6NCI4 1184 aa7.21□□□□□ -1.26
NEDD9-202ENST00000379446 TRAPPC3O43617 180 aa7.21□□□□□ -1.26
NEDD9-202ENST00000379446 BMP15O95972 392 aa7.21□□□□□ -1.26
NEDD9-202ENST00000379446 LRG1P02750 347 aa7.21□□□□□ -1.26
NEDD9-202ENST00000379446 ZBTB48P10074 688 aaPredicted RBP7.21□□□□□ -1.26
NEDD9-202ENST00000379446 BEX3Q00994 111 aa7.21□□□□□ -1.26
NEDD9-202ENST00000379446 PRKCZQ05513 592 aa7.21□□□□□ -1.26
NEDD9-202ENST00000379446 GABPB1Q06547 395 aaPredicted RBP7.21□□□□□ -1.26
NEDD9-202ENST00000379446 DMP1Q13316 513 aaPredicted RBP7.21□□□□□ -1.26
NEDD9-202ENST00000379446 TOB2Q14106 344 aaPredicted RBP7.21□□□□□ -1.26
NEDD9-202ENST00000379446 ARHGAP29Q52LW3 1261 aa7.21□□□□□ -1.26
NEDD9-202ENST00000379446 CYP4A22Q5TCH4 519 aa7.21□□□□□ -1.26
NEDD9-202ENST00000379446 MCTP2Q6DN12 878 aa7.21□□□□□ -1.26
NEDD9-202ENST00000379446 CCDC65Q8IXS2 484 aa7.21□□□□□ -1.26
NEDD9-202ENST00000379446 THEM5Q8N1Q8 247 aa7.21□□□□□ -1.26
NEDD9-202ENST00000379446 STAG1Q8WVM7 1258 aa7.21□□□□□ -1.26
NEDD9-202ENST00000379446 PGBD4Q96DM1 585 aa7.21□□□□□ -1.26
NEDD9-202ENST00000379446 FAM167AQ96KS9 214 aa7.21□□□□□ -1.26
NEDD9-202ENST00000379446 SNX25Q9H3E2 840 aa7.21□□□□□ -1.26
NEDD9-202ENST00000379446 HIPK3Q9H422 1215 aa7.21□□□□□ -1.26
NEDD9-202ENST00000379446 TOPORSQ9NS56 1045 aaPredicted RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms