RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 TMTC1Q8IUR5 882 aa11.69□□□□□ -0.54
POLR2J3-201ENST00000379340 GUF1Q8N442 669 aaKnown RBP11.69□□□□□ -0.54
POLR2J3-201ENST00000379340 JDP2Q8WYK2 163 aa11.69□□□□□ -0.54
POLR2J3-201ENST00000379340 SRRTQ9BXP5 876 aaKnown RBP11.69□□□□□ -0.54
POLR2J3-201ENST00000379340 VPS16Q9H269 839 aa11.69□□□□□ -0.54
POLR2J3-201ENST00000379340 BMP2KQ9NSY1 1161 aaPredicted RBP11.69□□□□□ -0.54
POLR2J3-201ENST00000379340 TAB2Q9NYJ8 693 aa11.69□□□□□ -0.54
POLR2J3-201ENST00000379340 TRIM49BA6NDI0 452 aa11.68□□□□□ -0.54
POLR2J3-201ENST00000379340 USP17L15C9J2P7 530 aa11.68□□□□□ -0.54
POLR2J3-201ENST00000379340 USP17L13C9JLJ4 530 aa11.68□□□□□ -0.54
POLR2J3-201ENST00000379340 USP17L11C9JVI0 530 aa11.68□□□□□ -0.54
POLR2J3-201ENST00000379340 USP17L18D6R9N7 530 aa11.68□□□□□ -0.54
POLR2J3-201ENST00000379340 USP17L22D6RA61 530 aa11.68□□□□□ -0.54
POLR2J3-201ENST00000379340 USP17L17D6RBQ6 530 aa11.68□□□□□ -0.54
POLR2J3-201ENST00000379340 USP17L19D6RCP7 530 aa11.68□□□□□ -0.54
POLR2J3-201ENST00000379340 USP17L20D6RJB6 530 aa11.68□□□□□ -0.54
POLR2J3-201ENST00000379340 RAD17O75943 681 aa11.68□□□□□ -0.54
POLR2J3-201ENST00000379340 GYPCP04921 128 aa11.68□□□□□ -0.54
POLR2J3-201ENST00000379340 CYP3A4P08684 503 aa11.68□□□□□ -0.54
POLR2J3-201ENST00000379340 CCDC175P0C221 793 aa11.68□□□□□ -0.54
POLR2J3-201ENST00000379340 CASP14P31944 242 aa11.68□□□□□ -0.54
POLR2J3-201ENST00000379340 CIITAP33076 1130 aa11.68□□□□□ -0.54
POLR2J3-201ENST00000379340 ARHGAP4P98171 946 aa11.68□□□□□ -0.54
POLR2J3-201ENST00000379340 UBXN1Q04323 297 aa11.68□□□□□ -0.54
POLR2J3-201ENST00000379340 LRRC63Q05C16 580 aa11.68□□□□□ -0.54
POLR2J3-201ENST00000379340 GOLGA8FQ08AF8 430 aa11.68□□□□□ -0.54
POLR2J3-201ENST00000379340 GOLGA8DPQ0D2H9 430 aa11.68□□□□□ -0.54
POLR2J3-201ENST00000379340 USP17L24Q0WX57 530 aa11.68□□□□□ -0.54
POLR2J3-201ENST00000379340 STK4Q13043 487 aa11.68□□□□□ -0.54
POLR2J3-201ENST00000379340 HSP90AA2PQ14568 343 aaPredicted RBP11.68□□□□□ -0.54
POLR2J3-201ENST00000379340 SHROOM1Q2M3G4 852 aaPredicted RBP11.68□□□□□ -0.54
POLR2J3-201ENST00000379340 USP17L6PQ6QN14 398 aa11.68□□□□□ -0.54
POLR2J3-201ENST00000379340 DLK2Q6UY11 383 aa11.68□□□□□ -0.54
POLR2J3-201ENST00000379340 FAM160B2Q86V87 743 aa11.68□□□□□ -0.54
POLR2J3-201ENST00000379340 IRF2BP1Q8IU81 584 aa11.68□□□□□ -0.54
POLR2J3-201ENST00000379340 CSGALNACT2Q8N6G5 542 aa11.68□□□□□ -0.54
POLR2J3-201ENST00000379340 MB21D1Q8N884 522 aa11.68□□□□□ -0.54
POLR2J3-201ENST00000379340 ERMNQ8TAM6 284 aa11.68□□□□□ -0.54
POLR2J3-201ENST00000379340 CHURC1Q8WUH1 139 aa11.68□□□□□ -0.54
POLR2J3-201ENST00000379340 ZBED3Q96IU2 234 aaPredicted RBP11.68□□□□□ -0.54
POLR2J3-201ENST00000379340 FAM20AQ96MK3 541 aa11.68□□□□□ -0.54
POLR2J3-201ENST00000379340 DUSP9Q99956 384 aaKnown RBP11.68□□□□□ -0.54
POLR2J3-201ENST00000379340 NUP58Q9BVL2 599 aa11.68□□□□□ -0.54
POLR2J3-201ENST00000379340 GLIS2Q9BZE0 524 aaPredicted RBP11.68□□□□□ -0.54
POLR2J3-201ENST00000379340 PDCL3Q9H2J4 239 aa11.68□□□□□ -0.54
POLR2J3-201ENST00000379340 L2HGDHQ9H9P8 463 aa11.68□□□□□ -0.54
POLR2J3-201ENST00000379340 ZBTB21Q9ULJ3 1066 aa11.68□□□□□ -0.54
POLR2J3-201ENST00000379340 MAPK8IP1Q9UQF2 711 aa11.68□□□□□ -0.54
POLR2J3-201ENST00000379340 MYMKA6NI61 221 aa11.67□□□□□ -0.54
POLR2J3-201ENST00000379340 KIF20AO95235 890 aa11.67□□□□□ -0.54
POLR2J3-201ENST00000379340 CELF2O95319 508 aaKnown RBP11.67□□□□□ -0.54
POLR2J3-201ENST00000379340 SLU7O95391 586 aaKnown RBP11.67□□□□□ -0.54
POLR2J3-201ENST00000379340 MAP3K10Q02779 954 aa11.67□□□□□ -0.54
POLR2J3-201ENST00000379340 RRP1BQ14684 758 aaKnown RBP11.67□□□□□ -0.54
POLR2J3-201ENST00000379340 PTPN21Q16825 1174 aa11.67□□□□□ -0.54
POLR2J3-201ENST00000379340 CENPPQ6IPU0 288 aa11.67□□□□□ -0.54
POLR2J3-201ENST00000379340 SYT10Q6XYQ8 523 aa11.67□□□□□ -0.54
POLR2J3-201ENST00000379340 RETREG2Q8NC44 543 aa11.67□□□□□ -0.54
POLR2J3-201ENST00000379340 ZNF507Q8TCN5 953 aa11.67□□□□□ -0.54
POLR2J3-201ENST00000379340 ANKRD7Q92527 254 aa11.67□□□□□ -0.54
POLR2J3-201ENST00000379340 ERO1AQ96HE7 468 aa11.67□□□□□ -0.54
POLR2J3-201ENST00000379340 TSG101Q99816 390 aa11.67□□□□□ -0.54
POLR2J3-201ENST00000379340 EHMT1Q9H9B1 1298 aa11.67□□□□□ -0.54
POLR2J3-201ENST00000379340 GINM1Q9NU53 330 aa11.67□□□□□ -0.54
POLR2J3-201ENST00000379340 PRR12Q9ULL5 1215 aa11.67□□□□□ -0.54
POLR2J3-201ENST00000379340 A0A1W2PRG0 241 aa11.67□□□□□ -0.54
POLR2J3-201ENST00000379340 CLRN2A0PK11 232 aa11.67□□□□□ -0.54
POLR2J3-201ENST00000379340 PMS1P54277 932 aaKnown RBP11.67□□□□□ -0.54
POLR2J3-201ENST00000379340 JAG1P78504 1218 aa11.67□□□□□ -0.54
POLR2J3-201ENST00000379340 EHHADHQ08426 723 aa11.67□□□□□ -0.54
POLR2J3-201ENST00000379340 TRIM65Q6PJ69 517 aa11.67□□□□□ -0.54
POLR2J3-201ENST00000379340 CYP26C1Q6V0L0 522 aa11.67□□□□□ -0.54
POLR2J3-201ENST00000379340 USP50Q70EL3 339 aaPredicted RBP11.67□□□□□ -0.54
POLR2J3-201ENST00000379340 KIAA0895Q8NCT3 520 aa11.67□□□□□ -0.54
POLR2J3-201ENST00000379340 DDX12PQ92771 950 aa11.67□□□□□ -0.54
POLR2J3-201ENST00000379340 NUP88Q99567 741 aaPredicted RBP11.67□□□□□ -0.54
POLR2J3-201ENST00000379340 VCPKMTQ9H867 229 aa11.67□□□□□ -0.54
POLR2J3-201ENST00000379340 ABHD10Q9NUJ1 306 aa11.67□□□□□ -0.54
POLR2J3-201ENST00000379340 PITPNM2Q9BZ72 1349 aa11.66□□□□□ -0.54
POLR2J3-201ENST00000379340 COBLO75128 1261 aa11.66□□□□□ -0.54
POLR2J3-201ENST00000379340 FCER1AP12319 257 aa11.66□□□□□ -0.54
POLR2J3-201ENST00000379340 CAP2P40123 477 aa11.66□□□□□ -0.54
POLR2J3-201ENST00000379340 RBM10P98175 930 aaKnown RBP11.66□□□□□ -0.54
POLR2J3-201ENST00000379340 TNIP1Q15025 636 aa11.66□□□□□ -0.54
POLR2J3-201ENST00000379340 USH1GQ495M9 461 aa11.66□□□□□ -0.54
POLR2J3-201ENST00000379340 ANKRD40Q6AI12 368 aa11.66□□□□□ -0.54
POLR2J3-201ENST00000379340 CCDC65Q8IXS2 484 aa11.66□□□□□ -0.54
POLR2J3-201ENST00000379340 ETNPPLQ8TBG4 499 aa11.66□□□□□ -0.54
POLR2J3-201ENST00000379340 CNOT6LQ96LI5 555 aaKnown RBP11.66□□□□□ -0.54
POLR2J3-201ENST00000379340 NUDT12Q9BQG2 462 aa11.66□□□□□ -0.54
POLR2J3-201ENST00000379340 TUBGCP2Q9BSJ2 902 aa11.66□□□□□ -0.54
POLR2J3-201ENST00000379340 RANBP17Q9H2T7 1088 aaKnown RBP11.66□□□□□ -0.54
POLR2J3-201ENST00000379340 VEZTQ9HBM0 779 aa11.66□□□□□ -0.54
POLR2J3-201ENST00000379340 FEM1BQ9UK73 627 aa11.66□□□□□ -0.54
POLR2J3-201ENST00000379340 ATAD5Q96QE3 1844 aa11.66□□□□□ -0.54
POLR2J3-201ENST00000379340 SHTN1A0MZ66 631 aa11.65□□□□□ -0.54
POLR2J3-201ENST00000379340 ASNSP08243 561 aa11.65□□□□□ -0.54
POLR2J3-201ENST00000379340 PRKCSHP14314 528 aaPredicted RBP11.65□□□□□ -0.54
POLR2J3-201ENST00000379340 RPS12P25398 132 aaKnown RBP11.65□□□□□ -0.54
POLR2J3-201ENST00000379340 MTIF2P46199 727 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms