RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 ZFYVE27Q5T4F4 411 aa11.93□□□□□ -0.5
USP6NL-202ENST00000379237 RNF220Q5VTB9 566 aa11.93□□□□□ -0.5
USP6NL-202ENST00000379237 RASGRF2O14827 1237 aa11.92□□□□□ -0.5
USP6NL-202ENST00000379237 LIN7AO14910 233 aaPredicted RBP11.92□□□□□ -0.5
USP6NL-202ENST00000379237 KRT18P05783 430 aaKnown RBP11.92□□□□□ -0.5
USP6NL-202ENST00000379237 KLK7P49862 253 aa11.92□□□□□ -0.5
USP6NL-202ENST00000379237 PDE1CQ14123 709 aaPredicted RBP11.92□□□□□ -0.5
USP6NL-202ENST00000379237 LACTB2Q53H82 288 aaPredicted RBP11.92□□□□□ -0.5
USP6NL-202ENST00000379237 APLFQ8IW19 511 aaPredicted RBP11.92□□□□□ -0.5
USP6NL-202ENST00000379237 ARHGAP18Q8N392 663 aa11.92□□□□□ -0.5
USP6NL-202ENST00000379237 MOV10L1Q9BXT6 1211 aaKnown RBP11.92□□□□□ -0.5
USP6NL-202ENST00000379237 FAM129AQ9BZQ8 928 aa11.92□□□□□ -0.5
USP6NL-202ENST00000379237 FOXP1Q9H334 677 aaPredicted RBP11.92□□□□□ -0.5
USP6NL-202ENST00000379237 LGR6Q9HBX8 967 aa11.92□□□□□ -0.5
USP6NL-202ENST00000379237 AMACRQ9UHK6 382 aa11.92□□□□□ -0.5
USP6NL-202ENST00000379237 THRAP3Q9Y2W1 955 aaKnown RBP11.92□□□□□ -0.5
USP6NL-202ENST00000379237 PPP1R3GB7ZBB8 358 aa11.92□□□□□ -0.5
USP6NL-202ENST00000379237 ANKRD13DQ6ZTN6 518 aa11.92□□□□□ -0.5
USP6NL-202ENST00000379237 OSBP2Q969R2 916 aa11.92□□□□□ -0.5
USP6NL-202ENST00000379237 GALNT8Q9NY28 637 aa11.92□□□□□ -0.5
USP6NL-202ENST00000379237 RCCD1A6NED2 376 aa11.92□□□□□ -0.5
USP6NL-202ENST00000379237 SPDYE5A6NIY4 337 aa11.92□□□□□ -0.5
USP6NL-202ENST00000379237 RANBP6O60518 1105 aaKnown RBP11.92□□□□□ -0.5
USP6NL-202ENST00000379237 RNF8O76064 485 aa11.92□□□□□ -0.5
USP6NL-202ENST00000379237 ZNF844Q08AG5 666 aa11.92□□□□□ -0.5
USP6NL-202ENST00000379237 BYSLQ13895 437 aaKnown RBP11.92□□□□□ -0.5
USP6NL-202ENST00000379237 DTHD1Q6ZMT9 781 aa11.92□□□□□ -0.5
USP6NL-202ENST00000379237 MAP7D3Q8IWC1 876 aa11.92□□□□□ -0.5
USP6NL-202ENST00000379237 APPBP2Q92624 585 aa11.92□□□□□ -0.5
USP6NL-202ENST00000379237 V9GY48 417 aaPredicted RBP11.92□□□□□ -0.5
USP6NL-202ENST00000379237 A0A1W2PQC6 194 aa11.92□□□□□ -0.5
USP6NL-202ENST00000379237 ZCCHC18P0CG32 403 aa11.92□□□□□ -0.5
USP6NL-202ENST00000379237 SPRED3Q2MJR0 410 aa11.92□□□□□ -0.5
USP6NL-202ENST00000379237 CATIPQ7Z7H3 387 aa11.92□□□□□ -0.5
USP6NL-202ENST00000379237 ZNF579Q8NAF0 562 aaKnown RBP11.92□□□□□ -0.5
USP6NL-202ENST00000379237 DTX3LQ8TDB6 740 aa11.92□□□□□ -0.5
USP6NL-202ENST00000379237 CARD9Q9H257 536 aa11.92□□□□□ -0.5
USP6NL-202ENST00000379237 FAF1Q9UNN5 650 aaPredicted RBP11.92□□□□□ -0.5
USP6NL-202ENST00000379237 ARL2BPQ9Y2Y0 163 aa11.92□□□□□ -0.5
USP6NL-202ENST00000379237 SRRM3A6NNA2 597 aaPredicted RBP11.91□□□□□ -0.5
USP6NL-202ENST00000379237 G3V3G9 751 aa11.91□□□□□ -0.5
USP6NL-202ENST00000379237 PRDM1O75626 825 aa11.91□□□□□ -0.5
USP6NL-202ENST00000379237 RIPK1Q13546 671 aa11.91□□□□□ -0.5
USP6NL-202ENST00000379237 SEPT6Q14141 434 aa11.91□□□□□ -0.5
USP6NL-202ENST00000379237 PROSER3Q2NL68 480 aa11.91□□□□□ -0.5
USP6NL-202ENST00000379237 DCAF8Q5TAQ9 597 aa11.91□□□□□ -0.5
USP6NL-202ENST00000379237 C6orf89Q6UWU4 347 aa11.91□□□□□ -0.5
USP6NL-202ENST00000379237 CCDC65Q8IXS2 484 aa11.91□□□□□ -0.5
USP6NL-202ENST00000379237 TBC1D5Q92609 795 aa11.91□□□□□ -0.5
USP6NL-202ENST00000379237 KIFAP3Q92845 792 aa11.91□□□□□ -0.5
USP6NL-202ENST00000379237 MTRQ99707 1265 aa11.91□□□□□ -0.5
USP6NL-202ENST00000379237 CCDC77Q9BR77 488 aa11.91□□□□□ -0.5
USP6NL-202ENST00000379237 CNNM1Q9NRU3 951 aa11.91□□□□□ -0.5
USP6NL-202ENST00000379237 CCDC87Q9NVE4 849 aa11.91□□□□□ -0.5
USP6NL-202ENST00000379237 PPP1R9AQ9ULJ8 1098 aa11.91□□□□□ -0.5
USP6NL-202ENST00000379237 ABCC3O15438 1527 aa11.91□□□□□ -0.5
USP6NL-202ENST00000379237 SART1O43290 800 aaKnown RBP11.91□□□□□ -0.5
USP6NL-202ENST00000379237 DRD4P21917 467 aa11.91□□□□□ -0.5
USP6NL-202ENST00000379237 SLC1A4P43007 532 aa11.91□□□□□ -0.5
USP6NL-202ENST00000379237 INF2Q27J81 1249 aa11.91□□□□□ -0.5
USP6NL-202ENST00000379237 C6orf118Q5T5N4 469 aa11.91□□□□□ -0.5
USP6NL-202ENST00000379237 SPTY2D1Q68D10 685 aaPredicted RBP11.91□□□□□ -0.5
USP6NL-202ENST00000379237 APBB1IPQ7Z5R6 666 aaPredicted RBP11.91□□□□□ -0.5
USP6NL-202ENST00000379237 PHLDB2Q86SQ0 1253 aa11.91□□□□□ -0.5
USP6NL-202ENST00000379237 SMC6Q96SB8 1091 aa11.91□□□□□ -0.5
USP6NL-202ENST00000379237 DAAM1Q9Y4D1 1078 aa11.91□□□□□ -0.5
USP6NL-202ENST00000379237 IL15P40933 162 aaPredicted RBP11.91□□□□□ -0.5
USP6NL-202ENST00000379237 Q4G0T1 1027 aa11.91□□□□□ -0.5
USP6NL-202ENST00000379237 MAP3K14Q99558 947 aa11.91□□□□□ -0.5
USP6NL-202ENST00000379237 DNAJC7Q99615 494 aa11.91□□□□□ -0.5
USP6NL-202ENST00000379237 ISCUQ9H1K1 167 aa11.91□□□□□ -0.5
USP6NL-202ENST00000379237 TULP4Q9NRJ4 1543 aa11.91□□□□□ -0.5
USP6NL-202ENST00000379237 SALL1Q9NSC2 1324 aa11.91□□□□□ -0.5
USP6NL-202ENST00000379237 LINGO3P0C6S8 592 aa11.9□□□□□ -0.5
USP6NL-202ENST00000379237 ITIH3Q06033 890 aa11.9□□□□□ -0.5
USP6NL-202ENST00000379237 ASIC2Q16515 512 aa11.9□□□□□ -0.5
USP6NL-202ENST00000379237 TOM1L2Q6ZVM7 507 aa11.9□□□□□ -0.5
USP6NL-202ENST00000379237 LCA5Q86VQ0 697 aa11.9□□□□□ -0.5
USP6NL-202ENST00000379237 ST13P4Q8IZP2 240 aaPredicted RBP11.9□□□□□ -0.5
USP6NL-202ENST00000379237 PDCD7Q8N8D1 485 aaKnown RBP11.9□□□□□ -0.5
USP6NL-202ENST00000379237 PAGR1Q9BTK6 254 aa11.9□□□□□ -0.5
USP6NL-202ENST00000379237 SLC5A4Q9NY91 659 aa11.9□□□□□ -0.5
USP6NL-202ENST00000379237 LRRC53A6NM62 1247 aa11.9□□□□□ -0.5
USP6NL-202ENST00000379237 TMEM110-MUSTN1A8MSY1 372 aa11.9□□□□□ -0.5
USP6NL-202ENST00000379237 KRT16P08779 473 aa11.9□□□□□ -0.5
USP6NL-202ENST00000379237 HSPA9P38646 679 aaKnown RBP11.9□□□□□ -0.5
USP6NL-202ENST00000379237 ERFP50548 548 aa11.9□□□□□ -0.5
USP6NL-202ENST00000379237 CACNA2D1P54289 1103 aa11.9□□□□□ -0.5
USP6NL-202ENST00000379237 TRADDQ15628 312 aa11.9□□□□□ -0.5
USP6NL-202ENST00000379237 METTL24Q5JXM2 366 aa11.9□□□□□ -0.5
USP6NL-202ENST00000379237 STAG2Q8N3U4 1231 aa11.9□□□□□ -0.5
USP6NL-202ENST00000379237 PIGOQ8TEQ8 1089 aa11.9□□□□□ -0.5
USP6NL-202ENST00000379237 MRRFQ96E11 262 aaKnown RBP11.9□□□□□ -0.5
USP6NL-202ENST00000379237 PITPNM3Q9BZ71 974 aa11.9□□□□□ -0.5
USP6NL-202ENST00000379237 THAP9Q9H5L6 903 aa11.9□□□□□ -0.5
USP6NL-202ENST00000379237 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.9□□□□□ -0.5
USP6NL-202ENST00000379237 PPIP5K2O43314 1243 aa11.9□□□□□ -0.5
USP6NL-202ENST00000379237 POLR2FP61218 127 aaKnown RBP11.9□□□□□ -0.5
USP6NL-202ENST00000379237 DZIP1Q86YF9 867 aaKnown RBP11.9□□□□□ -0.5
USP6NL-202ENST00000379237 CD302Q8IX05 232 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms