RNA–Protein interactions for RNA: ENST00000378839.1

CCDC3-202, Transcript of coiled-coil domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC3, Length 3,180 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC3-202ENST00000378839 NOA1Q8NC60 698 aaKnown RBP14.89□□□□□ -0.03
CCDC3-202ENST00000378839 CCDC47Q96A33 483 aaKnown RBP14.89□□□□□ -0.03
CCDC3-202ENST00000378839 MBOAT7Q96N66 472 aa14.89□□□□□ -0.03
CCDC3-202ENST00000378839 FAM207AQ9NSI2 230 aaPredicted RBP14.89□□□□□ -0.03
CCDC3-202ENST00000378839 SRGAP2O75044 1071 aa14.88□□□□□ -0.03
CCDC3-202ENST00000378839 ATP1A1P05023 1023 aaKnown RBP14.88□□□□□ -0.03
CCDC3-202ENST00000378839 APBA1Q02410 837 aa14.88□□□□□ -0.03
CCDC3-202ENST00000378839 ICA1Q05084 483 aa14.88□□□□□ -0.03
CCDC3-202ENST00000378839 USH1GQ495M9 461 aa14.88□□□□□ -0.03
CCDC3-202ENST00000378839 SLC30A10Q6XR72 485 aa14.88□□□□□ -0.03
CCDC3-202ENST00000378839 CYP2W1Q8TAV3 490 aa14.88□□□□□ -0.03
CCDC3-202ENST00000378839 ETNPPLQ8TBG4 499 aa14.88□□□□□ -0.03
CCDC3-202ENST00000378839 DCAF4Q8WV16 495 aa14.88□□□□□ -0.03
CCDC3-202ENST00000378839 DHX36Q9H2U1 1008 aaKnown RBP14.88□□□□□ -0.03
CCDC3-202ENST00000378839 ARHGAP20Q9P2F6 1191 aa14.88□□□□□ -0.03
CCDC3-202ENST00000378839 CYP3A7-CYP3A51PA0A087WV96 503 aa14.88□□□□□ -0.03
CCDC3-202ENST00000378839 FAM86B1E9PN63 330 aa14.88□□□□□ -0.03
CCDC3-202ENST00000378839 FAM86B2P0C5J1 330 aa14.88□□□□□ -0.03
CCDC3-202ENST00000378839 CYP3A7P24462 503 aa14.88□□□□□ -0.03
CCDC3-202ENST00000378839 KCNMA1Q12791 1236 aa14.88□□□□□ -0.03
CCDC3-202ENST00000378839 BMS1Q14692 1282 aaKnown RBP14.88□□□□□ -0.03
CCDC3-202ENST00000378839 TMCO3Q6UWJ1 677 aa14.88□□□□□ -0.03
CCDC3-202ENST00000378839 PCMTD1Q96MG8 357 aaPredicted RBP14.87□□□□□ -0.03
CCDC3-202ENST00000378839 PANK4Q9NVE7 773 aa14.87□□□□□ -0.03
CCDC3-202ENST00000378839 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.87□□□□□ -0.03
CCDC3-202ENST00000378839 POTEFA5A3E0 1075 aa14.87□□□□□ -0.03
CCDC3-202ENST00000378839 GH2P01242 217 aa14.87□□□□□ -0.03
CCDC3-202ENST00000378839 SSBP05455 408 aaKnown RBP eCLIP14.87□□□□□ -0.03
CCDC3-202ENST00000378839 POTEIP0CG38 1075 aa14.87□□□□□ -0.03
CCDC3-202ENST00000378839 POTEGQ6S5H5 508 aa14.87□□□□□ -0.03
CCDC3-202ENST00000378839 POTEEQ6S8J3 1075 aa14.87□□□□□ -0.03
CCDC3-202ENST00000378839 FAM114A1Q8IWE2 563 aa14.87□□□□□ -0.03
CCDC3-202ENST00000378839 SPICE1Q8N0Z3 855 aa14.87□□□□□ -0.03
CCDC3-202ENST00000378839 RAB34Q9BZG1 259 aa14.87□□□□□ -0.03
CCDC3-202ENST00000378839 UBXN6Q9BZV1 441 aa14.87□□□□□ -0.03
CCDC3-202ENST00000378839 RGPD3A6NKT7 1758 aaPredicted RBP14.87□□□□□ -0.03
CCDC3-202ENST00000378839 RGPD4Q7Z3J3 1758 aa14.87□□□□□ -0.03
CCDC3-202ENST00000378839 PSMD14O00487 310 aa14.87□□□□□ -0.03
CCDC3-202ENST00000378839 PLA2G4BP0C869 781 aa14.87□□□□□ -0.03
CCDC3-202ENST00000378839 CYP11B2P19099 503 aa14.87□□□□□ -0.03
CCDC3-202ENST00000378839 HOXA13P31271 388 aaPredicted RBP14.87□□□□□ -0.03
CCDC3-202ENST00000378839 CCDC122Q5T0U0 273 aa14.87□□□□□ -0.03
CCDC3-202ENST00000378839 TRAPPC11Q7Z392 1133 aa14.87□□□□□ -0.03
CCDC3-202ENST00000378839 CDAN1Q8IWY9 1227 aa14.87□□□□□ -0.03
CCDC3-202ENST00000378839 SMCR8Q8TEV9 937 aaPredicted RBP14.87□□□□□ -0.03
CCDC3-202ENST00000378839 SERPINA10Q9UK55 444 aa14.87□□□□□ -0.03
CCDC3-202ENST00000378839 A0A1W2PQJ5 194 aa14.86□□□□□ -0.03
CCDC3-202ENST00000378839 ECE1P42892 770 aa14.86□□□□□ -0.03
CCDC3-202ENST00000378839 CASP5P51878 434 aa14.86□□□□□ -0.03
CCDC3-202ENST00000378839 FKBP1AP62942 108 aaKnown RBP14.86□□□□□ -0.03
CCDC3-202ENST00000378839 ABCB5Q2M3G0 1257 aa14.86□□□□□ -0.03
CCDC3-202ENST00000378839 FIGNQ5HY92 759 aa14.86□□□□□ -0.03
CCDC3-202ENST00000378839 RETREG2Q8NC44 543 aa14.86□□□□□ -0.03
CCDC3-202ENST00000378839 BAP1Q92560 729 aa14.86□□□□□ -0.03
CCDC3-202ENST00000378839 NUP58Q9BVL2 599 aa14.86□□□□□ -0.03
CCDC3-202ENST00000378839 FUT8Q9BYC5 575 aa14.86□□□□□ -0.03
CCDC3-202ENST00000378839 SUGCTQ9HAC7 445 aa14.86□□□□□ -0.03
CCDC3-202ENST00000378839 POLD4Q9HCU8 107 aa14.86□□□□□ -0.03
CCDC3-202ENST00000378839 MYO6Q9UM54 1294 aa14.86□□□□□ -0.03
CCDC3-202ENST00000378839 H0YIN7 160 aa14.86□□□□□ -0.03
CCDC3-202ENST00000378839 MEIS1O00470 390 aa14.86□□□□□ -0.03
CCDC3-202ENST00000378839 SPATA31C1P0DKV0 1188 aa14.86□□□□□ -0.03
CCDC3-202ENST00000378839 GCFC2P16383 781 aaKnown RBP14.86□□□□□ -0.03
CCDC3-202ENST00000378839 POLD1P28340 1107 aa14.86□□□□□ -0.03
CCDC3-202ENST00000378839 SLC12A3P55017 1021 aa14.86□□□□□ -0.03
CCDC3-202ENST00000378839 ARHGAP4P98171 946 aa14.86□□□□□ -0.03
CCDC3-202ENST00000378839 PRR16Q569H4 304 aa14.86□□□□□ -0.03
CCDC3-202ENST00000378839 STYK1Q6J9G0 422 aa14.86□□□□□ -0.03
CCDC3-202ENST00000378839 CATSPER3Q86XQ3 398 aa14.86□□□□□ -0.03
CCDC3-202ENST00000378839 NELFCDQ8IXH7 590 aa14.86□□□□□ -0.03
CCDC3-202ENST00000378839 SCFD1Q8WVM8 642 aa14.86□□□□□ -0.03
CCDC3-202ENST00000378839 PDGFDQ9GZP0 370 aaPredicted RBP14.86□□□□□ -0.03
CCDC3-202ENST00000378839 MYO1AQ9UBC5 1043 aa14.86□□□□□ -0.03
CCDC3-202ENST00000378839 PPP1R2P41236 205 aa14.85□□□□□ -0.03
CCDC3-202ENST00000378839 USP11P51784 963 aa14.85□□□□□ -0.03
CCDC3-202ENST00000378839 HDLBPQ00341 1268 aaKnown RBP14.85□□□□□ -0.03
CCDC3-202ENST00000378839 MAN2A1Q16706 1144 aa14.85□□□□□ -0.03
CCDC3-202ENST00000378839 TMEM179Q6ZVK1 233 aa14.85□□□□□ -0.03
CCDC3-202ENST00000378839 EIF3CLB5ME19 914 aaKnown RBP14.85□□□□□ -0.03
CCDC3-202ENST00000378839 MARCH6O60337 910 aa14.85□□□□□ -0.03
CCDC3-202ENST00000378839 HNRNPH3P31942 346 aaKnown RBP14.85□□□□□ -0.03
CCDC3-202ENST00000378839 LRRC63Q05C16 580 aa14.85□□□□□ -0.03
CCDC3-202ENST00000378839 TERF2Q15554 542 aa14.85□□□□□ -0.03
CCDC3-202ENST00000378839 UTP14CQ5TAP6 766 aaKnown RBP14.85□□□□□ -0.03
CCDC3-202ENST00000378839 MYOCDQ8IZQ8 938 aa14.85□□□□□ -0.03
CCDC3-202ENST00000378839 GMCL1P1Q8NEA9 526 aa14.85□□□□□ -0.03
CCDC3-202ENST00000378839 TBC1D5Q92609 795 aa14.85□□□□□ -0.03
CCDC3-202ENST00000378839 JAKMIP2Q96AA8 810 aa14.85□□□□□ -0.03
CCDC3-202ENST00000378839 PURBQ96QR8 312 aaKnown RBP14.85□□□□□ -0.03
CCDC3-202ENST00000378839 EIF3CQ99613 913 aaKnown RBP14.85□□□□□ -0.03
CCDC3-202ENST00000378839 TMX4Q9H1E5 349 aaPredicted RBP14.85□□□□□ -0.03
CCDC3-202ENST00000378839 KCTD10Q9H3F6 313 aa14.85□□□□□ -0.03
CCDC3-202ENST00000378839 HAUS4Q9H6D7 363 aa14.85□□□□□ -0.03
CCDC3-202ENST00000378839 PLAGL2Q9UPG8 496 aa14.85□□□□□ -0.03
CCDC3-202ENST00000378839 COL4A5P29400 1685 aa14.85□□□□□ -0.03
CCDC3-202ENST00000378839 LRRC53A6NM62 1247 aa14.85□□□□□ -0.03
CCDC3-202ENST00000378839 NOL4O94818 638 aa14.85□□□□□ -0.03
CCDC3-202ENST00000378839 RHOXF2BP0C7M4 288 aa14.85□□□□□ -0.03
CCDC3-202ENST00000378839 HOXD13P35453 343 aa14.85□□□□□ -0.03
CCDC3-202ENST00000378839 FAM26FQ5R3K3 315 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms