RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 DHX37Q8IY37 1157 aaKnown RBP15.85■□□□□ 0.13
PRPF18-202ENST00000378572 MAF1Q9H063 256 aa15.85■□□□□ 0.13
PRPF18-202ENST00000378572 TSPYL2Q9H2G4 693 aaPredicted RBP15.85■□□□□ 0.13
PRPF18-202ENST00000378572 CERS4Q9HA82 394 aa15.85■□□□□ 0.13
PRPF18-202ENST00000378572 PCDHA1Q9Y5I3 950 aa15.85■□□□□ 0.13
PRPF18-202ENST00000378572 VCANP13611 3396 aa15.84■□□□□ 0.13
PRPF18-202ENST00000378572 IFIT3O14879 490 aaKnown RBP15.84■□□□□ 0.13
PRPF18-202ENST00000378572 EIF3JO75822 258 aaKnown RBP15.84■□□□□ 0.13
PRPF18-202ENST00000378572 NR3C2P08235 984 aa15.84■□□□□ 0.13
PRPF18-202ENST00000378572 HOXA13P31271 388 aaPredicted RBP15.84■□□□□ 0.13
PRPF18-202ENST00000378572 ANKRD1Q15327 319 aa15.84■□□□□ 0.13
PRPF18-202ENST00000378572 GDF6Q6KF10 455 aaPredicted RBP15.84■□□□□ 0.13
PRPF18-202ENST00000378572 KATNAL1Q9BW62 490 aa15.84■□□□□ 0.13
PRPF18-202ENST00000378572 AGXT2Q9BYV1 514 aa15.84■□□□□ 0.13
PRPF18-202ENST00000378572 DAXXQ9UER7 740 aaPredicted RBP15.84■□□□□ 0.13
PRPF18-202ENST00000378572 KIAA1217Q5T5P2 1943 aa15.84■□□□□ 0.13
PRPF18-202ENST00000378572 KIF28PB7ZC32 967 aa15.83■□□□□ 0.13
PRPF18-202ENST00000378572 ZBTB5O15062 677 aa15.83■□□□□ 0.13
PRPF18-202ENST00000378572 CPA1P15085 419 aa15.83■□□□□ 0.13
PRPF18-202ENST00000378572 MCM5P33992 734 aa15.83■□□□□ 0.13
PRPF18-202ENST00000378572 PSEN2P49810 448 aa15.83■□□□□ 0.13
PRPF18-202ENST00000378572 AK2P54819 239 aa15.83■□□□□ 0.13
PRPF18-202ENST00000378572 SART3Q15020 963 aaKnown RBP15.83■□□□□ 0.13
PRPF18-202ENST00000378572 CAGE1Q8TC20 777 aa15.83■□□□□ 0.13
PRPF18-202ENST00000378572 AFAP1L1Q8TED9 768 aa15.83■□□□□ 0.13
PRPF18-202ENST00000378572 PIBF1Q8WXW3 757 aa15.83■□□□□ 0.13
PRPF18-202ENST00000378572 MTA3Q9BTC8 594 aa15.83■□□□□ 0.13
PRPF18-202ENST00000378572 CHD9Q3L8U1 2897 aa15.83■□□□□ 0.12
PRPF18-202ENST00000378572 GTPBP6O43824 516 aaPredicted RBP15.82■□□□□ 0.12
PRPF18-202ENST00000378572 LAMC2Q13753 1193 aa15.82■□□□□ 0.12
PRPF18-202ENST00000378572 COL9A3Q14050 684 aaPredicted RBP15.82■□□□□ 0.12
PRPF18-202ENST00000378572 MFSD10Q14728 455 aa15.82■□□□□ 0.12
PRPF18-202ENST00000378572 WTAPQ15007 396 aa15.82■□□□□ 0.12
PRPF18-202ENST00000378572 LRRC8DQ7L1W4 858 aa15.82■□□□□ 0.12
PRPF18-202ENST00000378572 FCHSD1Q86WN1 690 aa15.82■□□□□ 0.12
PRPF18-202ENST00000378572 VWCEQ96DN2 955 aa15.82■□□□□ 0.12
PRPF18-202ENST00000378572 MAD2L2Q9UI95 211 aa15.82■□□□□ 0.12
PRPF18-202ENST00000378572 DDX41Q9UJV9 622 aaKnown RBP15.82■□□□□ 0.12
PRPF18-202ENST00000378572 SELPP16109 830 aa15.82■□□□□ 0.12
PRPF18-202ENST00000378572 HSD17B4P51659 736 aa15.82■□□□□ 0.12
PRPF18-202ENST00000378572 TRAF1Q13077 416 aa15.82■□□□□ 0.12
PRPF18-202ENST00000378572 SEC23AQ15436 765 aa15.82■□□□□ 0.12
PRPF18-202ENST00000378572 ATXN2LQ8WWM7 1075 aaKnown RBP15.82■□□□□ 0.12
PRPF18-202ENST00000378572 ARNTL2Q8WYA1 636 aa15.82■□□□□ 0.12
PRPF18-202ENST00000378572 KAT2BQ92831 832 aa15.82■□□□□ 0.12
PRPF18-202ENST00000378572 PIGSQ96S52 555 aa15.82■□□□□ 0.12
PRPF18-202ENST00000378572 PDCD2LQ9BRP1 358 aa15.82■□□□□ 0.12
PRPF18-202ENST00000378572 ZBED2Q9BTP6 218 aa15.82■□□□□ 0.12
PRPF18-202ENST00000378572 HDAC6Q9UBN7 1215 aa15.82■□□□□ 0.12
PRPF18-202ENST00000378572 GCOM1H8Y6P7 765 aaPredicted RBP15.81■□□□□ 0.12
PRPF18-202ENST00000378572 TLL1O43897 1013 aa15.81■□□□□ 0.12
PRPF18-202ENST00000378572 PPP1R11O60927 126 aaPredicted RBP15.81■□□□□ 0.12
PRPF18-202ENST00000378572 POLR2MP0CAP2 368 aa15.81■□□□□ 0.12
PRPF18-202ENST00000378572 CCND2P30279 289 aa15.81■□□□□ 0.12
PRPF18-202ENST00000378572 MRPS5P82675 430 aaKnown RBP15.81■□□□□ 0.12
PRPF18-202ENST00000378572 GRM4Q14833 912 aa15.81■□□□□ 0.12
PRPF18-202ENST00000378572 KIAA0753Q2KHM9 967 aa15.81■□□□□ 0.12
PRPF18-202ENST00000378572 HERC6Q8IVU3 1022 aa15.81■□□□□ 0.12
PRPF18-202ENST00000378572 PPTC7Q8NI37 304 aa15.81■□□□□ 0.12
PRPF18-202ENST00000378572 ZFP91Q96JP5 570 aaPredicted RBP15.81■□□□□ 0.12
PRPF18-202ENST00000378572 SPATA33Q96N06 139 aa15.81■□□□□ 0.12
PRPF18-202ENST00000378572 GTF2IRD1Q9UHL9 959 aa15.81■□□□□ 0.12
PRPF18-202ENST00000378572 LIMCH1Q9UPQ0 1083 aa15.81■□□□□ 0.12
PRPF18-202ENST00000378572 RFXAPO00287 272 aa15.8■□□□□ 0.12
PRPF18-202ENST00000378572 OPLAHO14841 1288 aa15.8■□□□□ 0.12
PRPF18-202ENST00000378572 BAIAP3O94812 1187 aa15.8■□□□□ 0.12
PRPF18-202ENST00000378572 GGPS1O95749 300 aa15.8■□□□□ 0.12
PRPF18-202ENST00000378572 ANTXR2P58335 489 aa15.8■□□□□ 0.12
PRPF18-202ENST00000378572 TOB2Q14106 344 aaPredicted RBP15.8■□□□□ 0.12
PRPF18-202ENST00000378572 CATIPQ7Z7H3 387 aa15.8■□□□□ 0.12
PRPF18-202ENST00000378572 SESTD1Q86VW0 696 aa15.8■□□□□ 0.12
PRPF18-202ENST00000378572 PHOSPHO2Q8TCD6 241 aa15.8■□□□□ 0.12
PRPF18-202ENST00000378572 TMEM87BQ96K49 555 aa15.8■□□□□ 0.12
PRPF18-202ENST00000378572 ZSCAN31Q96LW9 406 aaPredicted RBP15.8■□□□□ 0.12
PRPF18-202ENST00000378572 PALM3A6NDB9 673 aaPredicted RBP15.8■□□□□ 0.12
PRPF18-202ENST00000378572 TNFRSF10AO00220 468 aa15.8■□□□□ 0.12
PRPF18-202ENST00000378572 PRC1O43663 620 aa15.8■□□□□ 0.12
PRPF18-202ENST00000378572 PGM5Q15124 567 aa15.8■□□□□ 0.12
PRPF18-202ENST00000378572 KCNV1Q6PIU1 500 aa15.8■□□□□ 0.12
PRPF18-202ENST00000378572 Q6ZUG5 572 aa15.8■□□□□ 0.12
PRPF18-202ENST00000378572 IL31RAQ8NI17 732 aa15.8■□□□□ 0.12
PRPF18-202ENST00000378572 ADAMTS19Q8TE59 1207 aa15.8■□□□□ 0.12
PRPF18-202ENST00000378572 EMID1Q96A84 441 aaPredicted RBP15.8■□□□□ 0.12
PRPF18-202ENST00000378572 TMX3Q96JJ7 454 aa15.8■□□□□ 0.12
PRPF18-202ENST00000378572 ASB2Q96Q27 587 aa15.8■□□□□ 0.12
PRPF18-202ENST00000378572 MLXIPQ9HAP2 919 aa15.8■□□□□ 0.12
PRPF18-202ENST00000378572 SH2B1Q9NRF2 756 aaPredicted RBP15.8■□□□□ 0.12
PRPF18-202ENST00000378572 TRIP12Q14669 1992 aaPredicted RBP15.79■□□□□ 0.12
PRPF18-202ENST00000378572 F2P00734 622 aa15.79■□□□□ 0.12
PRPF18-202ENST00000378572 EVCP57679 992 aa15.79■□□□□ 0.12
PRPF18-202ENST00000378572 CUL4AQ13619 759 aa15.79■□□□□ 0.12
PRPF18-202ENST00000378572 DHX38Q92620 1227 aaKnown RBP15.79■□□□□ 0.12
PRPF18-202ENST00000378572 TCEANC2Q96MN5 208 aa15.79■□□□□ 0.12
PRPF18-202ENST00000378572 SENP2Q9HC62 589 aa15.79■□□□□ 0.12
PRPF18-202ENST00000378572 MAP3K20Q9NYL2 800 aaKnown RBP15.79■□□□□ 0.12
PRPF18-202ENST00000378572 TTC28Q96AY4 2481 aa15.79■□□□□ 0.12
PRPF18-202ENST00000378572 MYH7BA7E2Y1 1941 aa15.78■□□□□ 0.12
PRPF18-202ENST00000378572 NOP56O00567 594 aaKnown RBP15.78■□□□□ 0.12
PRPF18-202ENST00000378572 CKBP12277 381 aa15.78■□□□□ 0.12
PRPF18-202ENST00000378572 UBA1P22314 1058 aaKnown RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms