RNA–Protein interactions for RNA: ENST00000378387.3

ARHGEF39-201, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF39, Length 3,769 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-201ENST00000378387 IFNL3Q8IZI9 196 aa11.51□□□□□ -0.57
ARHGEF39-201ENST00000378387 FAM133AQ8N9E0 248 aa11.51□□□□□ -0.57
ARHGEF39-201ENST00000378387 NKX2-3Q8TAU0 364 aa11.51□□□□□ -0.57
ARHGEF39-201ENST00000378387 IGDCC4Q8TDY8 1250 aa11.51□□□□□ -0.57
ARHGEF39-201ENST00000378387 LPIN2Q92539 896 aa11.51□□□□□ -0.57
ARHGEF39-201ENST00000378387 NUDCD1Q96RS6 583 aa11.51□□□□□ -0.57
ARHGEF39-201ENST00000378387 HOMER3Q9NSC5 361 aa11.51□□□□□ -0.57
ARHGEF39-201ENST00000378387 DNAJC17Q9NVM6 304 aaKnown RBP11.51□□□□□ -0.57
ARHGEF39-201ENST00000378387 DBR1Q9UK59 544 aaKnown RBP11.51□□□□□ -0.57
ARHGEF39-201ENST00000378387 CCDC169A6NNP5 214 aa11.51□□□□□ -0.57
ARHGEF39-201ENST00000378387 ORC4O43929 436 aa11.51□□□□□ -0.57
ARHGEF39-201ENST00000378387 DNAJC8O75937 253 aaPredicted RBP11.51□□□□□ -0.57
ARHGEF39-201ENST00000378387 KRT18P05783 430 aaKnown RBP11.51□□□□□ -0.57
ARHGEF39-201ENST00000378387 STX2P32856 288 aa11.51□□□□□ -0.57
ARHGEF39-201ENST00000378387 CABP4P57796 275 aa11.51□□□□□ -0.57
ARHGEF39-201ENST00000378387 NTRK3Q16288 839 aa11.51□□□□□ -0.57
ARHGEF39-201ENST00000378387 STAG2Q8N3U4 1231 aa11.51□□□□□ -0.57
ARHGEF39-201ENST00000378387 ABTB1Q969K4 478 aaPredicted RBP11.51□□□□□ -0.57
ARHGEF39-201ENST00000378387 FGD4Q96M96 766 aa11.51□□□□□ -0.57
ARHGEF39-201ENST00000378387 TSG101Q99816 390 aa11.51□□□□□ -0.57
ARHGEF39-201ENST00000378387 SCOCQ9UIL1 159 aa11.51□□□□□ -0.57
ARHGEF39-201ENST00000378387 ATXN2Q99700 1313 aaKnown RBP11.51□□□□□ -0.57
ARHGEF39-201ENST00000378387 SNRPA1P09661 255 aaKnown RBP11.5□□□□□ -0.57
ARHGEF39-201ENST00000378387 SETSIPP0DME0 302 aa11.5□□□□□ -0.57
ARHGEF39-201ENST00000378387 FLT3P36888 993 aa11.5□□□□□ -0.57
ARHGEF39-201ENST00000378387 RFX5P48382 616 aaPredicted RBP11.5□□□□□ -0.57
ARHGEF39-201ENST00000378387 KLHDC7AQ5VTJ3 777 aa11.5□□□□□ -0.57
ARHGEF39-201ENST00000378387 TMTC2Q8N394 836 aa11.5□□□□□ -0.57
ARHGEF39-201ENST00000378387 LSM14BQ9BX40 385 aaKnown RBP11.5□□□□□ -0.57
ARHGEF39-201ENST00000378387 SALL4Q9UJQ4 1053 aa11.5□□□□□ -0.57
ARHGEF39-201ENST00000378387 LRRC10BA6NIK2 292 aa11.5□□□□□ -0.57
ARHGEF39-201ENST00000378387 PLEKHA8P1O95397 391 aa11.5□□□□□ -0.57
ARHGEF39-201ENST00000378387 ABCB4P21439 1286 aa11.5□□□□□ -0.57
ARHGEF39-201ENST00000378387 RFC5P40937 340 aa11.5□□□□□ -0.57
ARHGEF39-201ENST00000378387 TLDC1Q6P9B6 456 aa11.5□□□□□ -0.57
ARHGEF39-201ENST00000378387 NELFCDQ8IXH7 590 aa11.5□□□□□ -0.57
ARHGEF39-201ENST00000378387 EZH1Q92800 747 aaPredicted RBP11.5□□□□□ -0.57
ARHGEF39-201ENST00000378387 THAP9Q9H5L6 903 aa11.5□□□□□ -0.57
ARHGEF39-201ENST00000378387 PGRMC1O00264 195 aaKnown RBP11.5□□□□□ -0.57
ARHGEF39-201ENST00000378387 PDE6CP51160 858 aa11.5□□□□□ -0.57
ARHGEF39-201ENST00000378387 RNASELQ05823 741 aaKnown RBP11.5□□□□□ -0.57
ARHGEF39-201ENST00000378387 IFI16Q16666 785 aaKnown RBP11.5□□□□□ -0.57
ARHGEF39-201ENST00000378387 ESCO1Q5FWF5 840 aa11.5□□□□□ -0.57
ARHGEF39-201ENST00000378387 HHATQ5VTY9 493 aa11.5□□□□□ -0.57
ARHGEF39-201ENST00000378387 CEP128Q6ZU80 1094 aa11.5□□□□□ -0.57
ARHGEF39-201ENST00000378387 ADSSL1Q8N142 457 aa11.5□□□□□ -0.57
ARHGEF39-201ENST00000378387 MAB21L3Q8N8X9 362 aa11.5□□□□□ -0.57
ARHGEF39-201ENST00000378387 PLCB1Q9NQ66 1216 aa11.5□□□□□ -0.57
ARHGEF39-201ENST00000378387 RHBDL2Q9NX52 303 aa11.5□□□□□ -0.57
ARHGEF39-201ENST00000378387 RNF14Q9UBS8 474 aa11.5□□□□□ -0.57
ARHGEF39-201ENST00000378387 CORO1CQ9ULV4 474 aaPredicted RBP11.5□□□□□ -0.57
ARHGEF39-201ENST00000378387 CLSTN1O94985 981 aa11.49□□□□□ -0.57
ARHGEF39-201ENST00000378387 KRT16P08779 473 aa11.49□□□□□ -0.57
ARHGEF39-201ENST00000378387 DRD4P21917 467 aa11.49□□□□□ -0.57
ARHGEF39-201ENST00000378387 RAB27AP51159 221 aa11.49□□□□□ -0.57
ARHGEF39-201ENST00000378387 KLC1Q07866 573 aa11.49□□□□□ -0.57
ARHGEF39-201ENST00000378387 CUL1Q13616 776 aa11.49□□□□□ -0.57
ARHGEF39-201ENST00000378387 LETM2Q2VYF4 491 aa11.49□□□□□ -0.57
ARHGEF39-201ENST00000378387 RFX8Q6ZV50 586 aa11.49□□□□□ -0.57
ARHGEF39-201ENST00000378387 ATG9AQ7Z3C6 839 aa11.49□□□□□ -0.57
ARHGEF39-201ENST00000378387 TRIM74Q86UV6 250 aa11.49□□□□□ -0.57
ARHGEF39-201ENST00000378387 TRIM73Q86UV7 250 aa11.49□□□□□ -0.57
ARHGEF39-201ENST00000378387 PPFIBP2Q8ND30 876 aa11.49□□□□□ -0.57
ARHGEF39-201ENST00000378387 ESR2Q92731 530 aa11.49□□□□□ -0.57
ARHGEF39-201ENST00000378387 GPKOWQ92917 476 aaPredicted RBP eCLIP11.49□□□□□ -0.57
ARHGEF39-201ENST00000378387 UBA5Q9GZZ9 404 aa11.49□□□□□ -0.57
ARHGEF39-201ENST00000378387 ZMYND12Q9H0C1 365 aa11.49□□□□□ -0.57
ARHGEF39-201ENST00000378387 PIDD1Q9HB75 910 aa11.49□□□□□ -0.57
ARHGEF39-201ENST00000378387 ARHGEF10LQ9HCE6 1279 aa11.49□□□□□ -0.57
ARHGEF39-201ENST00000378387 VAT1LQ9HCJ6 419 aa11.49□□□□□ -0.57
ARHGEF39-201ENST00000378387 SERPINA10Q9UK55 444 aa11.49□□□□□ -0.57
ARHGEF39-201ENST00000378387 WNT7AO00755 349 aa11.49□□□□□ -0.57
ARHGEF39-201ENST00000378387 SMNDC1O75940 238 aaKnown RBP eCLIP11.49□□□□□ -0.57
ARHGEF39-201ENST00000378387 PDE6AP16499 860 aa11.49□□□□□ -0.57
ARHGEF39-201ENST00000378387 ICA1Q05084 483 aa11.49□□□□□ -0.57
ARHGEF39-201ENST00000378387 CHADLQ6NUI6 762 aa11.49□□□□□ -0.57
ARHGEF39-201ENST00000378387 NBPF10Q6P3W6 841 aaKnown RBP11.49□□□□□ -0.57
ARHGEF39-201ENST00000378387 TTLL7Q6ZT98 887 aa11.49□□□□□ -0.57
ARHGEF39-201ENST00000378387 RPS6KC1Q96S38 1066 aa11.49□□□□□ -0.57
ARHGEF39-201ENST00000378387 GDF3Q9NR23 364 aa11.49□□□□□ -0.57
ARHGEF39-201ENST00000378387 FAM217BQ9NTX9 383 aaPredicted RBP11.49□□□□□ -0.57
ARHGEF39-201ENST00000378387 CHCHD3Q9NX63 227 aaKnown RBP11.49□□□□□ -0.57
ARHGEF39-201ENST00000378387 RGL1Q9NZL6 768 aa11.49□□□□□ -0.57
ARHGEF39-201ENST00000378387 PNMA3Q9UL41 463 aa11.49□□□□□ -0.57
ARHGEF39-201ENST00000378387 TNKSO95271 1327 aa11.49□□□□□ -0.57
ARHGEF39-201ENST00000378387 PLEKHG3A1L390 1219 aa11.49□□□□□ -0.57
ARHGEF39-201ENST00000378387 SPDYE5A6NIY4 337 aa11.49□□□□□ -0.57
ARHGEF39-201ENST00000378387 EPHB6O15197 1021 aa11.49□□□□□ -0.57
ARHGEF39-201ENST00000378387 CREB3O43889 395 aa11.49□□□□□ -0.57
ARHGEF39-201ENST00000378387 PPFIA2O75334 1257 aa11.49□□□□□ -0.57
ARHGEF39-201ENST00000378387 RCN2Q14257 317 aa11.49□□□□□ -0.57
ARHGEF39-201ENST00000378387 DIXDC1Q155Q3 683 aa11.49□□□□□ -0.57
ARHGEF39-201ENST00000378387 SEPT7Q16181 437 aaKnown RBP11.49□□□□□ -0.57
ARHGEF39-201ENST00000378387 RNF220Q5VTB9 566 aa11.49□□□□□ -0.57
ARHGEF39-201ENST00000378387 TAOK1Q7L7X3 1001 aa11.49□□□□□ -0.57
ARHGEF39-201ENST00000378387 ARHGAP22Q7Z5H3 698 aa11.49□□□□□ -0.57
ARHGEF39-201ENST00000378387 IRF2BP1Q8IU81 584 aa11.49□□□□□ -0.57
ARHGEF39-201ENST00000378387 CTNNBL1Q8WYA6 563 aaPredicted RBP11.49□□□□□ -0.57
ARHGEF39-201ENST00000378387 RNF41Q9H4P4 317 aaPredicted RBP11.49□□□□□ -0.57
ARHGEF39-201ENST00000378387 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms