RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 FAM117BQ6P1L5 589 aa9.35□□□□□ -0.91
CRNKL1-202ENST00000377340 OR6J1Q8NGC5 347 aa9.35□□□□□ -0.91
CRNKL1-202ENST00000377340 VPS33BQ9H267 617 aa9.35□□□□□ -0.91
CRNKL1-202ENST00000377340 CENPHQ9H3R5 247 aa9.35□□□□□ -0.91
CRNKL1-202ENST00000377340 JADE2Q9NQC1 790 aa9.35□□□□□ -0.91
CRNKL1-202ENST00000377340 RGL1Q9NZL6 768 aa9.35□□□□□ -0.91
CRNKL1-202ENST00000377340 KIAA0100Q14667 2235 aaKnown RBP9.35□□□□□ -0.91
CRNKL1-202ENST00000377340 E9PMD0 336 aa9.34□□□□□ -0.91
CRNKL1-202ENST00000377340 SHMT1P34896 483 aa9.34□□□□□ -0.91
CRNKL1-202ENST00000377340 ARPP19P56211 112 aa9.34□□□□□ -0.91
CRNKL1-202ENST00000377340 TFAMQ00059 246 aaKnown RBP9.34□□□□□ -0.91
CRNKL1-202ENST00000377340 TAF3Q5VWG9 929 aa9.34□□□□□ -0.91
CRNKL1-202ENST00000377340 CCDC112Q8NEF3 446 aa9.34□□□□□ -0.91
CRNKL1-202ENST00000377340 RNF34Q969K3 372 aa9.34□□□□□ -0.91
CRNKL1-202ENST00000377340 DYDC2Q96IM9 177 aa9.34□□□□□ -0.91
CRNKL1-202ENST00000377340 P2RX7Q99572 595 aaKnown RBP9.34□□□□□ -0.91
CRNKL1-202ENST00000377340 TAF1DQ9H5J8 278 aaPredicted RBP9.34□□□□□ -0.91
CRNKL1-202ENST00000377340 ARMCX3Q9UH62 379 aaPredicted RBP9.34□□□□□ -0.91
CRNKL1-202ENST00000377340 POTEB3A0JP26 581 aa9.34□□□□□ -0.91
CRNKL1-202ENST00000377340 POTEFA5A3E0 1075 aa9.34□□□□□ -0.91
CRNKL1-202ENST00000377340 POTECB2RU33 542 aa9.34□□□□□ -0.91
CRNKL1-202ENST00000377340 RPN1P04843 607 aaKnown RBP9.34□□□□□ -0.91
CRNKL1-202ENST00000377340 POTEIP0CG38 1075 aa9.34□□□□□ -0.91
CRNKL1-202ENST00000377340 ATN1P54259 1190 aaPredicted RBP9.34□□□□□ -0.91
CRNKL1-202ENST00000377340 TWF2Q6IBS0 349 aaKnown RBP9.34□□□□□ -0.91
CRNKL1-202ENST00000377340 POTEBQ6S5H4 581 aa9.34□□□□□ -0.91
CRNKL1-202ENST00000377340 POTEGQ6S5H5 508 aa9.34□□□□□ -0.91
CRNKL1-202ENST00000377340 POTEEQ6S8J3 1075 aa9.34□□□□□ -0.91
CRNKL1-202ENST00000377340 TAAR1Q96RJ0 339 aa9.34□□□□□ -0.91
CRNKL1-202ENST00000377340 SPZ1Q9BXG8 430 aa9.34□□□□□ -0.91
CRNKL1-202ENST00000377340 TBC1D22BQ9NU19 505 aa9.34□□□□□ -0.91
CRNKL1-202ENST00000377340 TRIM17Q9Y577 477 aa9.34□□□□□ -0.91
CRNKL1-202ENST00000377340 LAD1O00515 517 aa9.34□□□□□ -0.91
CRNKL1-202ENST00000377340 KIF4AO95239 1232 aa9.34□□□□□ -0.91
CRNKL1-202ENST00000377340 XRCC5P13010 732 aaKnown RBP9.34□□□□□ -0.91
CRNKL1-202ENST00000377340 RFX1P22670 979 aa9.34□□□□□ -0.91
CRNKL1-202ENST00000377340 FCGRTP55899 365 aa9.34□□□□□ -0.91
CRNKL1-202ENST00000377340 TMEM62Q0P6H9 643 aa9.34□□□□□ -0.91
CRNKL1-202ENST00000377340 TROAPQ12815 778 aa9.34□□□□□ -0.91
CRNKL1-202ENST00000377340 RHPN2Q8IUC4 686 aa9.34□□□□□ -0.91
CRNKL1-202ENST00000377340 MTA3Q9BTC8 594 aa9.34□□□□□ -0.91
CRNKL1-202ENST00000377340 POLR3EQ9NVU0 708 aa9.34□□□□□ -0.91
CRNKL1-202ENST00000377340 TMEM63CQ9P1W3 806 aa9.34□□□□□ -0.91
CRNKL1-202ENST00000377340 GOLGA8IPA6NC78 632 aa9.34□□□□□ -0.91
CRNKL1-202ENST00000377340 GOLGA8JA6NMD2 632 aa9.34□□□□□ -0.91
CRNKL1-202ENST00000377340 SKILP12757 684 aa9.34□□□□□ -0.91
CRNKL1-202ENST00000377340 CYLC1P35663 651 aaPredicted RBP9.34□□□□□ -0.91
CRNKL1-202ENST00000377340 GSDMDP57764 484 aa9.34□□□□□ -0.91
CRNKL1-202ENST00000377340 HERVK_113P62684 666 aa9.34□□□□□ -0.91
CRNKL1-202ENST00000377340 PLCB3Q01970 1234 aa9.34□□□□□ -0.91
CRNKL1-202ENST00000377340 EFCC1Q9HA90 598 aa9.34□□□□□ -0.91
CRNKL1-202ENST00000377340 ZNF302Q9NR11 478 aa9.34□□□□□ -0.91
CRNKL1-202ENST00000377340 IGSF3O75054 1194 aa9.33□□□□□ -0.92
CRNKL1-202ENST00000377340 TFRCP02786 760 aaKnown RBP9.33□□□□□ -0.92
CRNKL1-202ENST00000377340 NEFHP12036 1026 aa9.33□□□□□ -0.92
CRNKL1-202ENST00000377340 PPP1R2P41236 205 aa9.33□□□□□ -0.92
CRNKL1-202ENST00000377340 EVX2Q03828 476 aa9.33□□□□□ -0.92
CRNKL1-202ENST00000377340 PPM1KQ8N3J5 372 aa9.33□□□□□ -0.92
CRNKL1-202ENST00000377340 RNF216Q9NWF9 866 aaPredicted RBP9.33□□□□□ -0.92
CRNKL1-202ENST00000377340 MYO6Q9UM54 1294 aa9.33□□□□□ -0.92
CRNKL1-202ENST00000377340 TMX2Q9Y320 296 aa9.33□□□□□ -0.92
CRNKL1-202ENST00000377340 LRP6O75581 1613 aa9.33□□□□□ -0.92
CRNKL1-202ENST00000377340 GTPBP6O43824 516 aaPredicted RBP9.33□□□□□ -0.92
CRNKL1-202ENST00000377340 STAT5BP51692 787 aa9.33□□□□□ -0.92
CRNKL1-202ENST00000377340 GNG11P61952 73 aa9.33□□□□□ -0.92
CRNKL1-202ENST00000377340 KRT76Q01546 638 aa9.33□□□□□ -0.92
CRNKL1-202ENST00000377340 MB21D1Q8N884 522 aa9.33□□□□□ -0.92
CRNKL1-202ENST00000377340 IGSF22Q8N9C0 903 aa9.33□□□□□ -0.92
CRNKL1-202ENST00000377340 AK8Q96MA6 479 aa9.33□□□□□ -0.92
CRNKL1-202ENST00000377340 IDI2Q9BXS1 227 aa9.33□□□□□ -0.92
CRNKL1-202ENST00000377340 SH3GLB2Q9NR46 395 aa9.33□□□□□ -0.92
CRNKL1-202ENST00000377340 SLC25A27O95847 323 aa9.33□□□□□ -0.92
CRNKL1-202ENST00000377340 RHBDL3P58872 404 aa9.33□□□□□ -0.92
CRNKL1-202ENST00000377340 SETQ01105 290 aaPredicted RBP9.33□□□□□ -0.92
CRNKL1-202ENST00000377340 DGKZQ13574 1117 aa9.33□□□□□ -0.92
CRNKL1-202ENST00000377340 SMC1AQ14683 1233 aaKnown RBP9.33□□□□□ -0.92
CRNKL1-202ENST00000377340 WDR70Q9NW82 654 aa9.33□□□□□ -0.92
CRNKL1-202ENST00000377340 GSTTP1A0A1W2PQM5 241 aa9.32□□□□□ -0.92
CRNKL1-202ENST00000377340 TCRBV5S4A2TA0A5A2 114 aa9.32□□□□□ -0.92
CRNKL1-202ENST00000377340 CAPN15O75808 1086 aa9.32□□□□□ -0.92
CRNKL1-202ENST00000377340 COPB2P35606 906 aa9.32□□□□□ -0.92
CRNKL1-202ENST00000377340 DDIT3P35638 169 aa9.32□□□□□ -0.92
CRNKL1-202ENST00000377340 PAFAH1B1P43034 410 aa9.32□□□□□ -0.92
CRNKL1-202ENST00000377340 PSMC4P43686 418 aa9.32□□□□□ -0.92
CRNKL1-202ENST00000377340 QARSP47897 775 aaKnown RBP9.32□□□□□ -0.92
CRNKL1-202ENST00000377340 RESTQ13127 1097 aa9.32□□□□□ -0.92
CRNKL1-202ENST00000377340 GPS2Q13227 327 aa9.32□□□□□ -0.92
CRNKL1-202ENST00000377340 CYP4F22Q6NT55 531 aa9.32□□□□□ -0.92
CRNKL1-202ENST00000377340 PARVGQ9HBI0 331 aa9.32□□□□□ -0.92
CRNKL1-202ENST00000377340 JPH1Q9HDC5 661 aaPredicted RBP9.32□□□□□ -0.92
CRNKL1-202ENST00000377340 SLC9A2Q9UBY0 812 aa9.32□□□□□ -0.92
CRNKL1-202ENST00000377340 COL14A1Q05707 1796 aaKnown RBP9.32□□□□□ -0.92
CRNKL1-202ENST00000377340 TNNC2P02585 160 aa9.32□□□□□ -0.92
CRNKL1-202ENST00000377340 RARBP10826 455 aa9.32□□□□□ -0.92
CRNKL1-202ENST00000377340 TNFAIP3P21580 790 aa9.32□□□□□ -0.92
CRNKL1-202ENST00000377340 NR2F2P24468 414 aa9.32□□□□□ -0.92
CRNKL1-202ENST00000377340 PRELPP51888 382 aa9.32□□□□□ -0.92
CRNKL1-202ENST00000377340 NLRP12P59046 1061 aa9.32□□□□□ -0.92
CRNKL1-202ENST00000377340 TSGA10IPQ3SY00 556 aa9.32□□□□□ -0.92
CRNKL1-202ENST00000377340 PADI6Q6TGC4 694 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms