RNA–Protein interactions for RNA: ENST00000377115.4

FOXA2-201, Transcript of forkhead box A2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXA2, Length 2,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2-201ENST00000377115 VCPKMTQ9H867 229 aa25.39■■□□□ 1.66
FOXA2-201ENST00000377115 PPANQ9NQ55 473 aaKnown RBP25.39■■□□□ 1.66
FOXA2-201ENST00000377115 CAMTA2O94983 1202 aa25.39■■□□□ 1.66
FOXA2-201ENST00000377115 FAM107AO95990 144 aa25.39■■□□□ 1.66
FOXA2-201ENST00000377115 NAPAP54920 295 aa25.39■■□□□ 1.66
FOXA2-201ENST00000377115 NONOQ15233 471 aaKnown RBP eCLIP25.39■■□□□ 1.66
FOXA2-201ENST00000377115 SLC9C1Q4G0N8 1177 aa25.39■■□□□ 1.66
FOXA2-201ENST00000377115 INTS5Q6P9B9 1019 aaKnown RBP25.39■■□□□ 1.66
FOXA2-201ENST00000377115 JAG2Q9Y219 1238 aa25.39■■□□□ 1.66
FOXA2-201ENST00000377115 ABCB11O95342 1321 aa25.39■■□□□ 1.65
FOXA2-201ENST00000377115 TXKP42681 527 aa25.38■■□□□ 1.65
FOXA2-201ENST00000377115 GNAQP50148 359 aa25.38■■□□□ 1.65
FOXA2-201ENST00000377115 ACTN3Q08043 901 aaPredicted RBP25.38■■□□□ 1.65
FOXA2-201ENST00000377115 DDR1Q08345 913 aa25.38■■□□□ 1.65
FOXA2-201ENST00000377115 NAB2Q15742 525 aa25.38■■□□□ 1.65
FOXA2-201ENST00000377115 MEI1Q5TIA1 1274 aa25.38■■□□□ 1.65
FOXA2-201ENST00000377115 CCDC13Q8IYE1 715 aa25.38■■□□□ 1.65
FOXA2-201ENST00000377115 GUF1Q8N442 669 aaKnown RBP25.38■■□□□ 1.65
FOXA2-201ENST00000377115 PACSIN1Q9BY11 444 aa25.38■■□□□ 1.65
FOXA2-201ENST00000377115 GRID2IPA4D2P6 1211 aa25.38■■□□□ 1.65
FOXA2-201ENST00000377115 NOL4O94818 638 aa25.38■■□□□ 1.65
FOXA2-201ENST00000377115 KCTD19Q17RG1 926 aaPredicted RBP25.38■■□□□ 1.65
FOXA2-201ENST00000377115 OR2W6PQ8NHA6 318 aa25.38■■□□□ 1.65
FOXA2-201ENST00000377115 CLSTN1O94985 981 aa25.37■■□□□ 1.65
FOXA2-201ENST00000377115 FGFR1OPO95684 399 aaKnown RBP25.37■■□□□ 1.65
FOXA2-201ENST00000377115 HSPA9P38646 679 aaKnown RBP25.37■■□□□ 1.65
FOXA2-201ENST00000377115 SFMBT2Q5VUG0 894 aa25.37■■□□□ 1.65
FOXA2-201ENST00000377115 NEK8Q86SG6 692 aa25.37■■□□□ 1.65
FOXA2-201ENST00000377115 TBC1D5Q92609 795 aa25.37■■□□□ 1.65
FOXA2-201ENST00000377115 ZMYND12Q9H0C1 365 aa25.37■■□□□ 1.65
FOXA2-201ENST00000377115 TMBIM4Q9HC24 238 aa25.37■■□□□ 1.65
FOXA2-201ENST00000377115 ARID5AQ03989 594 aa25.37■■□□□ 1.65
FOXA2-201ENST00000377115 LRRC63Q05C16 580 aa25.37■■□□□ 1.65
FOXA2-201ENST00000377115 HLTFQ14527 1009 aaKnown RBP eCLIP25.37■■□□□ 1.65
FOXA2-201ENST00000377115 ENOX2Q16206 610 aaKnown RBP25.37■■□□□ 1.65
FOXA2-201ENST00000377115 FAM83BQ5T0W9 1011 aa25.37■■□□□ 1.65
FOXA2-201ENST00000377115 KRT25Q7Z3Z0 450 aa25.37■■□□□ 1.65
FOXA2-201ENST00000377115 PNMA5Q96PV4 448 aa25.37■■□□□ 1.65
FOXA2-201ENST00000377115 SERPING1P05155 500 aa25.36■■□□□ 1.65
FOXA2-201ENST00000377115 ERVK-9P63128 1117 aa25.36■■□□□ 1.65
FOXA2-201ENST00000377115 USP38Q8NB14 1042 aa25.36■■□□□ 1.65
FOXA2-201ENST00000377115 CYFIP2Q96F07 1278 aa25.36■■□□□ 1.65
FOXA2-201ENST00000377115 CEP72Q9P209 647 aa25.36■■□□□ 1.65
FOXA2-201ENST00000377115 MINPP1Q9UNW1 487 aa25.36■■□□□ 1.65
FOXA2-201ENST00000377115 PCDHGC5Q9Y5F6 944 aa25.36■■□□□ 1.65
FOXA2-201ENST00000377115 POLR2FP61218 127 aaKnown RBP25.36■■□□□ 1.65
FOXA2-201ENST00000377115 C6orf89Q6UWU4 347 aa25.36■■□□□ 1.65
FOXA2-201ENST00000377115 C1orf131Q8NDD1 294 aaKnown RBP25.36■■□□□ 1.65
FOXA2-201ENST00000377115 TBCKQ8TEA7 893 aa25.36■■□□□ 1.65
FOXA2-201ENST00000377115 LARP4BQ92615 738 aaKnown RBP25.36■■□□□ 1.65
FOXA2-201ENST00000377115 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP25.36■■□□□ 1.65
FOXA2-201ENST00000377115 SMCO2A6NFE2 343 aa25.35■■□□□ 1.65
FOXA2-201ENST00000377115 ECHS1P30084 290 aa25.35■■□□□ 1.65
FOXA2-201ENST00000377115 HSD17B3P37058 310 aa25.35■■□□□ 1.65
FOXA2-201ENST00000377115 CCDC40Q4G0X9 1142 aa25.35■■□□□ 1.65
FOXA2-201ENST00000377115 ZKSCAN4Q969J2 545 aaPredicted RBP25.35■■□□□ 1.65
FOXA2-201ENST00000377115 LSM14BQ9BX40 385 aaKnown RBP25.35■■□□□ 1.65
FOXA2-201ENST00000377115 EDEM3Q9BZQ6 932 aa25.35■■□□□ 1.65
FOXA2-201ENST00000377115 TAF1DQ9H5J8 278 aaPredicted RBP25.35■■□□□ 1.65
FOXA2-201ENST00000377115 KLC4Q9NSK0 619 aa25.35■■□□□ 1.65
FOXA2-201ENST00000377115 STX8Q9UNK0 236 aa25.35■■□□□ 1.65
FOXA2-201ENST00000377115 A0A087X0T9 212 aa25.35■■□□□ 1.65
FOXA2-201ENST00000377115 PVALEFA0A1B0GWK0 134 aa25.35■■□□□ 1.65
FOXA2-201ENST00000377115 FAM228BP0C875 321 aa25.35■■□□□ 1.65
FOXA2-201ENST00000377115 MYBP10242 640 aa25.35■■□□□ 1.65
FOXA2-201ENST00000377115 KIAA0753Q2KHM9 967 aa25.35■■□□□ 1.65
FOXA2-201ENST00000377115 PROCA1Q8NCQ7 364 aaPredicted RBP25.35■■□□□ 1.65
FOXA2-201ENST00000377115 KANSL2Q9H9L4 492 aa25.35■■□□□ 1.65
FOXA2-201ENST00000377115 CCDC87Q9NVE4 849 aa25.35■■□□□ 1.65
FOXA2-201ENST00000377115 TFCP2L1Q9NZI6 479 aa25.35■■□□□ 1.65
FOXA2-201ENST00000377115 PALM3A6NDB9 673 aaPredicted RBP25.34■■□□□ 1.65
FOXA2-201ENST00000377115 GOLGA6L10A6NI86 522 aa25.34■■□□□ 1.65
FOXA2-201ENST00000377115 ATP6V1AP38606 617 aa25.34■■□□□ 1.65
FOXA2-201ENST00000377115 CRKLP46109 303 aaKnown RBP25.34■■□□□ 1.65
FOXA2-201ENST00000377115 TNNC1P63316 161 aa25.34■■□□□ 1.65
FOXA2-201ENST00000377115 UAP1Q16222 522 aaPredicted RBP25.34■■□□□ 1.65
FOXA2-201ENST00000377115 SLC44A5Q8NCS7 719 aa25.34■■□□□ 1.65
FOXA2-201ENST00000377115 ANKS1AQ92625 1134 aa25.34■■□□□ 1.65
FOXA2-201ENST00000377115 PLCB1Q9NQ66 1216 aa25.34■■□□□ 1.65
FOXA2-201ENST00000377115 ATP6V0A2Q9Y487 856 aa25.34■■□□□ 1.65
FOXA2-201ENST00000377115 SMTNP53814 917 aa25.34■■□□□ 1.65
FOXA2-201ENST00000377115 SPRED3Q2MJR0 410 aa25.34■■□□□ 1.65
FOXA2-201ENST00000377115 PPP4R3AQ6IN85 833 aa25.34■■□□□ 1.65
FOXA2-201ENST00000377115 FBXO33Q7Z6M2 555 aa25.34■■□□□ 1.65
FOXA2-201ENST00000377115 DDX42Q86XP3 938 aaKnown RBP eCLIP25.34■■□□□ 1.65
FOXA2-201ENST00000377115 GOLPH3Q9H4A6 298 aa25.34■■□□□ 1.65
FOXA2-201ENST00000377115 MKNK2Q9HBH9 465 aa25.34■■□□□ 1.65
FOXA2-201ENST00000377115 A1CFQ9NQ94 594 aaKnown RBP25.34■■□□□ 1.65
FOXA2-201ENST00000377115 KLRF2D3W0D1 207 aa25.33■■□□□ 1.65
FOXA2-201ENST00000377115 RASSF9O75901 435 aa25.33■■□□□ 1.65
FOXA2-201ENST00000377115 TSPY3P0CV98 308 aa25.33■■□□□ 1.65
FOXA2-201ENST00000377115 TSPY8P0CW00 308 aa25.33■■□□□ 1.65
FOXA2-201ENST00000377115 SLC18A3Q16572 532 aa25.33■■□□□ 1.65
FOXA2-201ENST00000377115 PTPROQ16827 1216 aa25.33■■□□□ 1.65
FOXA2-201ENST00000377115 C12orf60Q5U649 245 aa25.33■■□□□ 1.65
FOXA2-201ENST00000377115 TMEM47Q9BQJ4 181 aa25.33■■□□□ 1.65
FOXA2-201ENST00000377115 BSDC1Q9NW68 430 aaPredicted RBP25.33■■□□□ 1.65
FOXA2-201ENST00000377115 BIN2Q9UBW5 565 aaPredicted RBP25.33■■□□□ 1.65
FOXA2-201ENST00000377115 ADAMTS1Q9UHI8 967 aa25.33■■□□□ 1.65
FOXA2-201ENST00000377115 GCOM1H8Y6P7 765 aaPredicted RBP25.33■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms