RNA–Protein interactions for RNA: ENST00000376919.3

SSX1-201, Transcript of SSX family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX1, Length 1,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1-201ENST00000376919 RPS26P11Q5JNZ5 115 aaPredicted RBP6.72□□□□□ -1.33
SSX1-201ENST00000376919 TSHZ3Q63HK5 1081 aa6.72□□□□□ -1.33
SSX1-201ENST00000376919 ZSCAN25Q6NSZ9 544 aa6.72□□□□□ -1.33
SSX1-201ENST00000376919 CDC37L1Q7L3B6 337 aa6.72□□□□□ -1.33
SSX1-201ENST00000376919 KRT25Q7Z3Z0 450 aa6.72□□□□□ -1.33
SSX1-201ENST00000376919 CHD1LQ86WJ1 897 aa6.72□□□□□ -1.33
SSX1-201ENST00000376919 NCAPG2Q86XI2 1143 aa6.72□□□□□ -1.33
SSX1-201ENST00000376919 RBBP8NLQ8NC74 664 aaPredicted RBP6.72□□□□□ -1.33
SSX1-201ENST00000376919 CNTNAP3BQ96NU0 1288 aa6.72□□□□□ -1.33
SSX1-201ENST00000376919 OSMRQ99650 979 aa6.72□□□□□ -1.33
SSX1-201ENST00000376919 CNTNAP3Q9BZ76 1288 aa6.72□□□□□ -1.33
SSX1-201ENST00000376919 GLIS2Q9BZE0 524 aaPredicted RBP6.72□□□□□ -1.33
SSX1-201ENST00000376919 TDRD3Q9H7E2 651 aaKnown RBP6.72□□□□□ -1.33
SSX1-201ENST00000376919 EFCC1Q9HA90 598 aa6.72□□□□□ -1.33
SSX1-201ENST00000376919 ABT1Q9ULW3 272 aaKnown RBP6.72□□□□□ -1.33
SSX1-201ENST00000376919 NAV1Q8NEY1 1877 aa6.72□□□□□ -1.33
SSX1-201ENST00000376919 MROH7-TTC4A0A0A0MT08 1334 aa6.72□□□□□ -1.33
SSX1-201ENST00000376919 TTC41PQ6P2S7 1318 aa6.72□□□□□ -1.33
SSX1-201ENST00000376919 PITPNM2Q9BZ72 1349 aa6.72□□□□□ -1.33
SSX1-201ENST00000376919 PPFIA3O75145 1194 aa6.71□□□□□ -1.34
SSX1-201ENST00000376919 KIF4AO95239 1232 aa6.71□□□□□ -1.34
SSX1-201ENST00000376919 GJB6O95452 261 aa6.71□□□□□ -1.34
SSX1-201ENST00000376919 ATP5JP18859 108 aa6.71□□□□□ -1.34
SSX1-201ENST00000376919 CD33P20138 364 aa6.71□□□□□ -1.34
SSX1-201ENST00000376919 CYP7A1P22680 504 aa6.71□□□□□ -1.34
SSX1-201ENST00000376919 BTDP43251 543 aa6.71□□□□□ -1.34
SSX1-201ENST00000376919 SPEM2Q0P670 501 aa6.71□□□□□ -1.34
SSX1-201ENST00000376919 GRM1Q13255 1194 aa6.71□□□□□ -1.34
SSX1-201ENST00000376919 PICALMQ13492 652 aa6.71□□□□□ -1.34
SSX1-201ENST00000376919 GRIK5Q16478 980 aa6.71□□□□□ -1.34
SSX1-201ENST00000376919 HHIPL2Q6UWX4 724 aa6.71□□□□□ -1.34
SSX1-201ENST00000376919 CENPQQ7L2Z9 268 aaPredicted RBP6.71□□□□□ -1.34
SSX1-201ENST00000376919 LSRQ86X29 649 aaPredicted RBP6.71□□□□□ -1.34
SSX1-201ENST00000376919 MAGEB6Q8N7X4 407 aa6.71□□□□□ -1.34
SSX1-201ENST00000376919 ST13P5Q8NFI4 369 aaPredicted RBP6.71□□□□□ -1.34
SSX1-201ENST00000376919 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.71□□□□□ -1.34
SSX1-201ENST00000376919 ZNF669Q96BR6 464 aaPredicted RBP6.71□□□□□ -1.34
SSX1-201ENST00000376919 ZNF512BQ96KM6 892 aaPredicted RBP6.71□□□□□ -1.34
SSX1-201ENST00000376919 IER2Q9BTL4 223 aa6.71□□□□□ -1.34
SSX1-201ENST00000376919 FSD1Q9BTV5 496 aa6.71□□□□□ -1.34
SSX1-201ENST00000376919 PIH1D3Q9NQM4 214 aaKnown RBP6.71□□□□□ -1.34
SSX1-201ENST00000376919 GEMIN8Q9NWZ8 242 aaKnown RBP6.71□□□□□ -1.34
SSX1-201ENST00000376919 ZFATQ9P243 1243 aa6.71□□□□□ -1.34
SSX1-201ENST00000376919 GABBR1Q9UBS5 961 aa6.71□□□□□ -1.34
SSX1-201ENST00000376919 GPN3Q9UHW5 284 aaPredicted RBP6.71□□□□□ -1.34
SSX1-201ENST00000376919 SCAF8Q9UPN6 1271 aaKnown RBP6.71□□□□□ -1.34
SSX1-201ENST00000376919 PHF24Q9UPV7 400 aa6.71□□□□□ -1.34
SSX1-201ENST00000376919 DAGLAQ9Y4D2 1042 aa6.71□□□□□ -1.34
SSX1-201ENST00000376919 SAMM50Q9Y512 469 aa6.71□□□□□ -1.34
SSX1-201ENST00000376919 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.71□□□□□ -1.34
SSX1-201ENST00000376919 ASTN2O75129 1339 aaPredicted RBP6.71□□□□□ -1.34
SSX1-201ENST00000376919 FAM221AA4D161 298 aa6.7□□□□□ -1.34
SSX1-201ENST00000376919 TRAF5O00463 557 aa6.7□□□□□ -1.34
SSX1-201ENST00000376919 LCE2BO14633 110 aa6.7□□□□□ -1.34
SSX1-201ENST00000376919 CELF2O95319 508 aaKnown RBP6.7□□□□□ -1.34
SSX1-201ENST00000376919 MAP3K6O95382 1288 aa6.7□□□□□ -1.34
SSX1-201ENST00000376919 ASMTLO95671 621 aa6.7□□□□□ -1.34
SSX1-201ENST00000376919 RARAP10276 462 aa6.7□□□□□ -1.34
SSX1-201ENST00000376919 FGFR3P22607 806 aa6.7□□□□□ -1.34
SSX1-201ENST00000376919 SOX18P35713 384 aa6.7□□□□□ -1.34
SSX1-201ENST00000376919 GRIA4P48058 902 aa6.7□□□□□ -1.34
SSX1-201ENST00000376919 CACNB3P54284 484 aa6.7□□□□□ -1.34
SSX1-201ENST00000376919 TBX4P57082 545 aa6.7□□□□□ -1.34
SSX1-201ENST00000376919 EXOSC10Q01780 885 aaKnown RBP6.7□□□□□ -1.34
SSX1-201ENST00000376919 NUCB1Q02818 461 aa6.7□□□□□ -1.34
SSX1-201ENST00000376919 TCP10Q12799 353 aa6.7□□□□□ -1.34
SSX1-201ENST00000376919 HYAL2Q12891 473 aa6.7□□□□□ -1.34
SSX1-201ENST00000376919 PRKG1Q13976 671 aa6.7□□□□□ -1.34
SSX1-201ENST00000376919 SLC9C2Q5TAH2 1124 aa6.7□□□□□ -1.34
SSX1-201ENST00000376919 Q6ZNB5 142 aa6.7□□□□□ -1.34
SSX1-201ENST00000376919 GK5Q6ZS86 529 aa6.7□□□□□ -1.34
SSX1-201ENST00000376919 REC114Q7Z4M0 266 aa6.7□□□□□ -1.34
SSX1-201ENST00000376919 SMC5Q8IY18 1101 aa6.7□□□□□ -1.34
SSX1-201ENST00000376919 TEX11Q8IYF3 940 aa6.7□□□□□ -1.34
SSX1-201ENST00000376919 C19orf47Q8N9M1 422 aaKnown RBP6.7□□□□□ -1.34
SSX1-201ENST00000376919 MIGA1Q8NAN2 632 aa6.7□□□□□ -1.34
SSX1-201ENST00000376919 ZSWIM2Q8NEG5 633 aa6.7□□□□□ -1.34
SSX1-201ENST00000376919 RILPL2Q969X0 211 aa6.7□□□□□ -1.34
SSX1-201ENST00000376919 PLD4Q96BZ4 506 aa6.7□□□□□ -1.34
SSX1-201ENST00000376919 CDCA5Q96FF9 252 aa6.7□□□□□ -1.34
SSX1-201ENST00000376919 PRMT6Q96LA8 375 aaPredicted RBP6.7□□□□□ -1.34
SSX1-201ENST00000376919 ZDHHC15Q96MV8 337 aa6.7□□□□□ -1.34
SSX1-201ENST00000376919 PNMA5Q96PV4 448 aa6.7□□□□□ -1.34
SSX1-201ENST00000376919 SLC30A3Q99726 388 aa6.7□□□□□ -1.34
SSX1-201ENST00000376919 HAUS7Q99871 368 aa6.7□□□□□ -1.34
SSX1-201ENST00000376919 BHLHE41Q9C0J9 482 aaPredicted RBP6.7□□□□□ -1.34
SSX1-201ENST00000376919 TNKS2Q9H2K2 1166 aa6.7□□□□□ -1.34
SSX1-201ENST00000376919 ANTXR1Q9H6X2 564 aa6.7□□□□□ -1.34
SSX1-201ENST00000376919 BRMS1Q9HCU9 246 aa6.7□□□□□ -1.34
SSX1-201ENST00000376919 USP40Q9NVE5 1235 aa6.7□□□□□ -1.34
SSX1-201ENST00000376919 AATFQ9NY61 560 aaKnown RBP eCLIP6.7□□□□□ -1.34
SSX1-201ENST00000376919 ZNF70Q9UC06 446 aaPredicted RBP6.7□□□□□ -1.34
SSX1-201ENST00000376919 PFDN2Q9UHV9 154 aa6.7□□□□□ -1.34
SSX1-201ENST00000376919 PRR12Q9ULL5 1215 aa6.7□□□□□ -1.34
SSX1-201ENST00000376919 PCDHAC2Q9Y5I4 1007 aa6.7□□□□□ -1.34
SSX1-201ENST00000376919 PPP2R3BQ9Y5P8 575 aa6.7□□□□□ -1.34
SSX1-201ENST00000376919 PAPPA2Q9BXP8 1791 aa6.69□□□□□ -1.34
SSX1-201ENST00000376919 POLR2AP24928 1970 aaKnown RBP6.69□□□□□ -1.34
SSX1-201ENST00000376919 FOCADQ5VW36 1801 aa6.69□□□□□ -1.34
SSX1-201ENST00000376919 CDK5RAP2Q96SN8 1893 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms