RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 POTEFA5A3E0 1075 aa14.45□□□□□ -0.1
TRIM40-206ENST00000376724 CHMP2AO43633 222 aa14.45□□□□□ -0.1
TRIM40-206ENST00000376724 POTEIP0CG38 1075 aa14.45□□□□□ -0.1
TRIM40-206ENST00000376724 MAP3K9P80192 1104 aa14.45□□□□□ -0.1
TRIM40-206ENST00000376724 STK4Q13043 487 aa14.45□□□□□ -0.1
TRIM40-206ENST00000376724 CEP55Q53EZ4 464 aa14.45□□□□□ -0.1
TRIM40-206ENST00000376724 NOL9Q5SY16 702 aaKnown RBP14.45□□□□□ -0.1
TRIM40-206ENST00000376724 POTEGQ6S5H5 508 aa14.45□□□□□ -0.1
TRIM40-206ENST00000376724 POTEEQ6S8J3 1075 aa14.45□□□□□ -0.1
TRIM40-206ENST00000376724 CATSPER3Q86XQ3 398 aa14.45□□□□□ -0.1
TRIM40-206ENST00000376724 SLC39A2Q9NP94 309 aa14.45□□□□□ -0.1
TRIM40-206ENST00000376724 MEIS1O00470 390 aa14.44□□□□□ -0.1
TRIM40-206ENST00000376724 PPP1R12BO60237 982 aaPredicted RBP14.44□□□□□ -0.1
TRIM40-206ENST00000376724 CYP4A11Q02928 519 aa14.44□□□□□ -0.1
TRIM40-206ENST00000376724 HYIQ5T013 277 aa14.44□□□□□ -0.1
TRIM40-206ENST00000376724 LRCH2Q5VUJ6 765 aa14.44□□□□□ -0.1
TRIM40-206ENST00000376724 NSMFQ6X4W1 530 aa14.44□□□□□ -0.1
TRIM40-206ENST00000376724 CNKSR2Q8WXI2 1034 aa14.44□□□□□ -0.1
TRIM40-206ENST00000376724 C12orf42Q96LP6 360 aa14.44□□□□□ -0.1
TRIM40-206ENST00000376724 INTS13Q9NVM9 706 aa14.44□□□□□ -0.1
TRIM40-206ENST00000376724 IMPACTQ9P2X3 320 aa14.44□□□□□ -0.1
TRIM40-206ENST00000376724 VAV3Q9UKW4 847 aa14.44□□□□□ -0.1
TRIM40-206ENST00000376724 SNCAIPQ9Y6H5 919 aa14.44□□□□□ -0.1
TRIM40-206ENST00000376724 PSMA7O14818 248 aa14.44□□□□□ -0.1
TRIM40-206ENST00000376724 PLA2G4BP0C869 781 aa14.44□□□□□ -0.1
TRIM40-206ENST00000376724 ARP10275 920 aa14.44□□□□□ -0.1
TRIM40-206ENST00000376724 DSG3P32926 999 aa14.44□□□□□ -0.1
TRIM40-206ENST00000376724 PMS1P54277 932 aaKnown RBP14.44□□□□□ -0.1
TRIM40-206ENST00000376724 RPS6P62753 249 aaKnown RBP14.44□□□□□ -0.1
TRIM40-206ENST00000376724 COG2Q14746 738 aa14.44□□□□□ -0.1
TRIM40-206ENST00000376724 CDKAL1Q5VV42 579 aa14.44□□□□□ -0.1
TRIM40-206ENST00000376724 CNNM4Q6P4Q7 775 aa14.44□□□□□ -0.1
TRIM40-206ENST00000376724 UNC13DQ70J99 1090 aa14.44□□□□□ -0.1
TRIM40-206ENST00000376724 IL31RAQ8NI17 732 aa14.44□□□□□ -0.1
TRIM40-206ENST00000376724 LRRC27Q9C0I9 530 aa14.44□□□□□ -0.1
TRIM40-206ENST00000376724 PKD2L1Q9P0L9 805 aa14.44□□□□□ -0.1
TRIM40-206ENST00000376724 RIPK3Q9Y572 518 aa14.44□□□□□ -0.1
TRIM40-206ENST00000376724 CSADQ9Y600 493 aa14.44□□□□□ -0.1
TRIM40-206ENST00000376724 EML1O00423 815 aa14.43□□□□□ -0.1
TRIM40-206ENST00000376724 EPHX2P34913 555 aa14.43□□□□□ -0.1
TRIM40-206ENST00000376724 GSDMDP57764 484 aa14.43□□□□□ -0.1
TRIM40-206ENST00000376724 PSMC6P62333 389 aa14.43□□□□□ -0.1
TRIM40-206ENST00000376724 RAD51AP2Q09MP3 1159 aa14.43□□□□□ -0.1
TRIM40-206ENST00000376724 SNRNP48Q6IEG0 339 aaKnown RBP14.43□□□□□ -0.1
TRIM40-206ENST00000376724 CATSPERGQ6ZRH7 1159 aa14.43□□□□□ -0.1
TRIM40-206ENST00000376724 SYTL5Q8TDW5 730 aaPredicted RBP14.43□□□□□ -0.1
TRIM40-206ENST00000376724 TAAR1Q96RJ0 339 aa14.43□□□□□ -0.1
TRIM40-206ENST00000376724 ZNF577Q9BSK1 485 aa14.43□□□□□ -0.1
TRIM40-206ENST00000376724 PHIPQ8WWQ0 1821 aa14.43□□□□□ -0.1
TRIM40-206ENST00000376724 NPHP3-ACAD11A0A0J9YXS1 232 aa14.42□□□□□ -0.1
TRIM40-206ENST00000376724 GAS7O60861 476 aa14.42□□□□□ -0.1
TRIM40-206ENST00000376724 SPATA31C1P0DKV0 1188 aa14.42□□□□□ -0.1
TRIM40-206ENST00000376724 FDX1P10109 184 aa14.42□□□□□ -0.1
TRIM40-206ENST00000376724 EIF2AK2P19525 551 aaKnown RBP14.42□□□□□ -0.1
TRIM40-206ENST00000376724 RPA1P27694 616 aa14.42□□□□□ -0.1
TRIM40-206ENST00000376724 CACNB1Q02641 598 aaPredicted RBP14.42□□□□□ -0.1
TRIM40-206ENST00000376724 SEMA3FQ13275 785 aa14.42□□□□□ -0.1
TRIM40-206ENST00000376724 TTLL12Q14166 644 aaPredicted RBP14.42□□□□□ -0.1
TRIM40-206ENST00000376724 PLS1Q14651 629 aa14.42□□□□□ -0.1
TRIM40-206ENST00000376724 NOLC1Q14978 699 aaKnown RBP eCLIP14.42□□□□□ -0.1
TRIM40-206ENST00000376724 EAPPQ56P03 285 aaPredicted RBP14.42□□□□□ -0.1
TRIM40-206ENST00000376724 RNF207Q6ZRF8 634 aa14.42□□□□□ -0.1
TRIM40-206ENST00000376724 MOB2Q70IA6 237 aa14.42□□□□□ -0.1
TRIM40-206ENST00000376724 OTOP1Q7RTM1 612 aa14.42□□□□□ -0.1
TRIM40-206ENST00000376724 GPBP1Q86WP2 473 aa14.42□□□□□ -0.1
TRIM40-206ENST00000376724 VSTM4Q8IW00 320 aa14.42□□□□□ -0.1
TRIM40-206ENST00000376724 KIAA0895Q8NCT3 520 aa14.42□□□□□ -0.1
TRIM40-206ENST00000376724 KIAA1524Q8TCG1 905 aa14.42□□□□□ -0.1
TRIM40-206ENST00000376724 TRIM47Q96LD4 638 aa14.42□□□□□ -0.1
TRIM40-206ENST00000376724 PURBQ96QR8 312 aaKnown RBP14.42□□□□□ -0.1
TRIM40-206ENST00000376724 EIF2AK1Q9BQI3 630 aaKnown RBP14.42□□□□□ -0.1
TRIM40-206ENST00000376724 MXRA8Q9BRK3 442 aa14.42□□□□□ -0.1
TRIM40-206ENST00000376724 BMP2KQ9NSY1 1161 aaPredicted RBP14.42□□□□□ -0.1
TRIM40-206ENST00000376724 RNF146Q9NTX7 359 aa14.42□□□□□ -0.1
TRIM40-206ENST00000376724 RGL1Q9NZL6 768 aa14.42□□□□□ -0.1
TRIM40-206ENST00000376724 PVALEFA0A1B0GWK0 134 aa14.42□□□□□ -0.1
TRIM40-206ENST00000376724 DDX39AO00148 427 aaKnown RBP14.42□□□□□ -0.1
TRIM40-206ENST00000376724 PSMD10O75832 226 aa14.42□□□□□ -0.1
TRIM40-206ENST00000376724 PABPC4Q13310 644 aaKnown RBP eCLIP14.42□□□□□ -0.1
TRIM40-206ENST00000376724 SLC5A5Q92911 643 aa14.42□□□□□ -0.1
TRIM40-206ENST00000376724 EEF2KMTQ96G04 330 aa14.42□□□□□ -0.1
TRIM40-206ENST00000376724 WDR11Q9BZH6 1224 aa14.42□□□□□ -0.1
TRIM40-206ENST00000376724 ELP3Q9H9T3 547 aa14.42□□□□□ -0.1
TRIM40-206ENST00000376724 KRT18P05783 430 aaKnown RBP14.41□□□□□ -0.1
TRIM40-206ENST00000376724 MYCLP12524 364 aaPredicted RBP14.41□□□□□ -0.1
TRIM40-206ENST00000376724 SKILP12757 684 aa14.41□□□□□ -0.1
TRIM40-206ENST00000376724 ITGB5P18084 799 aa14.41□□□□□ -0.1
TRIM40-206ENST00000376724 IREB2P48200 963 aaKnown RBP14.41□□□□□ -0.1
TRIM40-206ENST00000376724 SETQ01105 290 aaPredicted RBP14.41□□□□□ -0.1
TRIM40-206ENST00000376724 CTTNQ14247 550 aaKnown RBP14.41□□□□□ -0.1
TRIM40-206ENST00000376724 NR1I3Q14994 352 aa14.41□□□□□ -0.1
TRIM40-206ENST00000376724 TMEM132BQ14DG7 1078 aa14.41□□□□□ -0.1
TRIM40-206ENST00000376724 ARMCX5Q6P1M9 558 aa14.41□□□□□ -0.1
TRIM40-206ENST00000376724 USP50Q70EL3 339 aaPredicted RBP14.41□□□□□ -0.1
TRIM40-206ENST00000376724 DNAJC19Q96DA6 116 aa14.41□□□□□ -0.1
TRIM40-206ENST00000376724 CDCA5Q96FF9 252 aa14.41□□□□□ -0.1
TRIM40-206ENST00000376724 DHTKD1Q96HY7 919 aaPredicted RBP14.41□□□□□ -0.1
TRIM40-206ENST00000376724 SRRTQ9BXP5 876 aaKnown RBP14.41□□□□□ -0.1
TRIM40-206ENST00000376724 PANK4Q9NVE7 773 aa14.41□□□□□ -0.1
TRIM40-206ENST00000376724 DNM3Q9UQ16 869 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms