RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 SWAP70Q9UH65 585 aa11.83□□□□□ -0.52
ABCF1-202ENST00000376545 SALL4Q9UJQ4 1053 aa11.83□□□□□ -0.52
ABCF1-202ENST00000376545 TTLL1O95922 423 aa11.82□□□□□ -0.52
ABCF1-202ENST00000376545 AKR1B1P15121 316 aa11.82□□□□□ -0.52
ABCF1-202ENST00000376545 GCFC2P16383 781 aaKnown RBP11.82□□□□□ -0.52
ABCF1-202ENST00000376545 TCP1P17987 556 aaKnown RBP11.82□□□□□ -0.52
ABCF1-202ENST00000376545 COASYQ13057 564 aa11.82□□□□□ -0.52
ABCF1-202ENST00000376545 CCDC155Q8N6L0 562 aa11.82□□□□□ -0.52
ABCF1-202ENST00000376545 CCDC102AQ96A19 550 aa11.82□□□□□ -0.52
ABCF1-202ENST00000376545 CDK5RAP3Q96JB5 506 aa11.82□□□□□ -0.52
ABCF1-202ENST00000376545 CEP63Q96MT8 703 aa11.82□□□□□ -0.52
ABCF1-202ENST00000376545 OSBPL9Q96SU4 736 aa11.82□□□□□ -0.52
ABCF1-202ENST00000376545 SELENOOQ9BVL4 669 aa11.82□□□□□ -0.52
ABCF1-202ENST00000376545 NUCKS1Q9H1E3 243 aaKnown RBP11.82□□□□□ -0.52
ABCF1-202ENST00000376545 MLXIPQ9HAP2 919 aa11.82□□□□□ -0.52
ABCF1-202ENST00000376545 JADE2Q9NQC1 790 aa11.82□□□□□ -0.52
ABCF1-202ENST00000376545 FAM207AQ9NSI2 230 aaPredicted RBP11.82□□□□□ -0.52
ABCF1-202ENST00000376545 ADAMTSL1Q8N6G6 1762 aa11.82□□□□□ -0.52
ABCF1-202ENST00000376545 FRMD3A2A2Y4 597 aa11.82□□□□□ -0.52
ABCF1-202ENST00000376545 RNF40O75150 1001 aa11.82□□□□□ -0.52
ABCF1-202ENST00000376545 SLC20A2Q08357 652 aa11.82□□□□□ -0.52
ABCF1-202ENST00000376545 C2orf54Q08AI8 447 aa11.82□□□□□ -0.52
ABCF1-202ENST00000376545 MYOCDQ8IZQ8 938 aa11.82□□□□□ -0.52
ABCF1-202ENST00000376545 SPATA4Q8NEY3 305 aa11.82□□□□□ -0.52
ABCF1-202ENST00000376545 MBOAT7Q96N66 472 aa11.82□□□□□ -0.52
ABCF1-202ENST00000376545 CEP72Q9P209 647 aa11.82□□□□□ -0.52
ABCF1-202ENST00000376545 FAM184BQ9ULE4 1060 aa11.82□□□□□ -0.52
ABCF1-202ENST00000376545 COL4A3BPQ9Y5P4 624 aa11.82□□□□□ -0.52
ABCF1-202ENST00000376545 MOCS3O95396 460 aa11.82□□□□□ -0.52
ABCF1-202ENST00000376545 FKBP3Q00688 224 aaKnown RBP11.82□□□□□ -0.52
ABCF1-202ENST00000376545 FAM196AQ6ZSG2 479 aa11.82□□□□□ -0.52
ABCF1-202ENST00000376545 RRAGAQ7L523 313 aa11.82□□□□□ -0.52
ABCF1-202ENST00000376545 CRAMP1Q96RY5 1269 aa11.82□□□□□ -0.52
ABCF1-202ENST00000376545 TSG101Q99816 390 aa11.82□□□□□ -0.52
ABCF1-202ENST00000376545 MMRN2Q9H8L6 949 aa11.82□□□□□ -0.52
ABCF1-202ENST00000376545 FAM204AQ9H8W3 233 aa11.82□□□□□ -0.52
ABCF1-202ENST00000376545 CWC15Q9P013 229 aaKnown RBP11.82□□□□□ -0.52
ABCF1-202ENST00000376545 HYOU1Q9Y4L1 999 aa11.82□□□□□ -0.52
ABCF1-202ENST00000376545 CYP3A7-CYP3A51PA0A087WV96 503 aa11.81□□□□□ -0.52
ABCF1-202ENST00000376545 IVLP07476 585 aa11.81□□□□□ -0.52
ABCF1-202ENST00000376545 CYP3A7P24462 503 aa11.81□□□□□ -0.52
ABCF1-202ENST00000376545 KLHDC7AQ5VTJ3 777 aa11.81□□□□□ -0.52
ABCF1-202ENST00000376545 LRRC47Q8N1G4 583 aaKnown RBP11.81□□□□□ -0.52
ABCF1-202ENST00000376545 NAP1L4Q99733 375 aaKnown RBP11.81□□□□□ -0.52
ABCF1-202ENST00000376545 NT5C3AQ9H0P0 336 aa11.81□□□□□ -0.52
ABCF1-202ENST00000376545 DDX4Q9NQI0 724 aaKnown RBP11.81□□□□□ -0.52
ABCF1-202ENST00000376545 DDX25Q9UHL0 483 aaKnown RBP11.81□□□□□ -0.52
ABCF1-202ENST00000376545 ANKRD31Q8N7Z5 1873 aa11.81□□□□□ -0.52
ABCF1-202ENST00000376545 KDM3AQ9Y4C1 1321 aa11.81□□□□□ -0.52
ABCF1-202ENST00000376545 TLR2O60603 784 aa11.81□□□□□ -0.52
ABCF1-202ENST00000376545 GYS1P13807 737 aa11.81□□□□□ -0.52
ABCF1-202ENST00000376545 SHMT1P34896 483 aa11.81□□□□□ -0.52
ABCF1-202ENST00000376545 TRIM59Q8IWR1 403 aa11.81□□□□□ -0.52
ABCF1-202ENST00000376545 CUL5Q93034 780 aa11.81□□□□□ -0.52
ABCF1-202ENST00000376545 ZBTB9Q96C00 473 aa11.81□□□□□ -0.52
ABCF1-202ENST00000376545 TLR10Q9BXR5 811 aa11.81□□□□□ -0.52
ABCF1-202ENST00000376545 KCTD10Q9H3F6 313 aa11.81□□□□□ -0.52
ABCF1-202ENST00000376545 KCNMB3Q9NPA1 279 aa11.81□□□□□ -0.52
ABCF1-202ENST00000376545 ZNF646O15015 1829 aaPredicted RBP11.8□□□□□ -0.52
ABCF1-202ENST00000376545 ZBTB5O15062 677 aa11.8□□□□□ -0.52
ABCF1-202ENST00000376545 SHOX2O60902 331 aaPredicted RBP11.8□□□□□ -0.52
ABCF1-202ENST00000376545 GNA14O95837 355 aa11.8□□□□□ -0.52
ABCF1-202ENST00000376545 MAGEA1P43355 309 aa11.8□□□□□ -0.52
ABCF1-202ENST00000376545 GPATCH4Q5T3I0 446 aaKnown RBP11.8□□□□□ -0.52
ABCF1-202ENST00000376545 DPY19L2P1Q6NXN4 242 aa11.8□□□□□ -0.52
ABCF1-202ENST00000376545 DPP8Q6V1X1 898 aaPredicted RBP11.8□□□□□ -0.52
ABCF1-202ENST00000376545 CAGE1Q8TC20 777 aa11.8□□□□□ -0.52
ABCF1-202ENST00000376545 CRYGNQ8WXF5 182 aa11.8□□□□□ -0.52
ABCF1-202ENST00000376545 ALS2CR12Q96Q35 445 aa11.8□□□□□ -0.52
ABCF1-202ENST00000376545 SH3GL2Q99962 352 aa11.8□□□□□ -0.52
ABCF1-202ENST00000376545 LRRC1Q9BTT6 524 aa11.8□□□□□ -0.52
ABCF1-202ENST00000376545 RNF14Q9UBS8 474 aa11.8□□□□□ -0.52
ABCF1-202ENST00000376545 NRXN2Q9P2S2 1712 aa11.8□□□□□ -0.52
ABCF1-202ENST00000376545 GGCXP38435 758 aa11.8□□□□□ -0.52
ABCF1-202ENST00000376545 LRRC41Q15345 812 aa11.8□□□□□ -0.52
ABCF1-202ENST00000376545 UBE2SQ16763 222 aa11.8□□□□□ -0.52
ABCF1-202ENST00000376545 LRRC31Q6UY01 552 aa11.8□□□□□ -0.52
ABCF1-202ENST00000376545 TSPYL1Q9H0U9 437 aa11.8□□□□□ -0.52
ABCF1-202ENST00000376545 LRRC4BQ9NT99 713 aa11.8□□□□□ -0.52
ABCF1-202ENST00000376545 PANK4Q9NVE7 773 aa11.8□□□□□ -0.52
ABCF1-202ENST00000376545 RNF216Q9NWF9 866 aaPredicted RBP11.8□□□□□ -0.52
ABCF1-202ENST00000376545 TSKSQ9UJT2 592 aa11.8□□□□□ -0.52
ABCF1-202ENST00000376545 AKR1B10O60218 316 aa11.8□□□□□ -0.52
ABCF1-202ENST00000376545 CLSTN1O94985 981 aa11.8□□□□□ -0.52
ABCF1-202ENST00000376545 SERPINB2P05120 415 aa11.8□□□□□ -0.52
ABCF1-202ENST00000376545 SERPING1P05155 500 aa11.8□□□□□ -0.52
ABCF1-202ENST00000376545 MRPL12P52815 198 aaKnown RBP11.8□□□□□ -0.52
ABCF1-202ENST00000376545 GFPT1Q06210 699 aaPredicted RBP11.8□□□□□ -0.52
ABCF1-202ENST00000376545 GLE1Q53GS7 698 aaKnown RBP11.8□□□□□ -0.52
ABCF1-202ENST00000376545 FAM26FQ5R3K3 315 aa11.8□□□□□ -0.52
ABCF1-202ENST00000376545 NFRKBQ6P4R8 1299 aa11.8□□□□□ -0.52
ABCF1-202ENST00000376545 LEKR1Q6ZMV7 388 aa11.8□□□□□ -0.52
ABCF1-202ENST00000376545 TMC4Q7Z404 712 aa11.8□□□□□ -0.52
ABCF1-202ENST00000376545 HDAC7Q8WUI4 952 aa11.8□□□□□ -0.52
ABCF1-202ENST00000376545 FGFBP2Q9BYJ0 223 aa11.8□□□□□ -0.52
ABCF1-202ENST00000376545 GPCPD1Q9NPB8 672 aa11.8□□□□□ -0.52
ABCF1-202ENST00000376545 AIPL1Q9NZN9 384 aa11.8□□□□□ -0.52
ABCF1-202ENST00000376545 DMGDHQ9UI17 866 aaKnown RBP11.8□□□□□ -0.52
ABCF1-202ENST00000376545 PCDHA12Q9UN75 941 aa11.8□□□□□ -0.52
ABCF1-202ENST00000376545 ZMYND10O75800 440 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms