RNA–Protein interactions for RNA: ENST00000376395.8

UBQLN1-202, Transcript of ubiquilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN1, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-202ENST00000376395 HAUS3Q68CZ6 603 aa16.25■□□□□ 0.19
UBQLN1-202ENST00000376395 SPICE1Q8N0Z3 855 aa16.25■□□□□ 0.19
UBQLN1-202ENST00000376395 CTTNBP2NLQ9P2B4 639 aa16.25■□□□□ 0.19
UBQLN1-202ENST00000376395 NPHP3-ACAD11A0A0J9YXS1 232 aa16.24■□□□□ 0.19
UBQLN1-202ENST00000376395 A0A1W2PRG0 241 aa16.24■□□□□ 0.19
UBQLN1-202ENST00000376395 IFNAR2P48551 515 aa16.24■□□□□ 0.19
UBQLN1-202ENST00000376395 CCDC174Q6PII3 467 aa16.24■□□□□ 0.19
UBQLN1-202ENST00000376395 RUFY4Q6ZNE9 571 aa16.24■□□□□ 0.19
UBQLN1-202ENST00000376395 RBM12Q9NTZ6 932 aaKnown RBP16.24■□□□□ 0.19
UBQLN1-202ENST00000376395 BARHL2Q9NY43 387 aa16.24■□□□□ 0.19
UBQLN1-202ENST00000376395 PCDHA1Q9Y5I3 950 aa16.24■□□□□ 0.19
UBQLN1-202ENST00000376395 LRRN2O75325 713 aa16.24■□□□□ 0.19
UBQLN1-202ENST00000376395 PRPF6O94906 941 aaKnown RBP16.24■□□□□ 0.19
UBQLN1-202ENST00000376395 VPS41P49754 854 aa16.24■□□□□ 0.19
UBQLN1-202ENST00000376395 CACNB3P54284 484 aa16.24■□□□□ 0.19
UBQLN1-202ENST00000376395 SP4Q02446 784 aa16.24■□□□□ 0.19
UBQLN1-202ENST00000376395 ITPK1Q13572 414 aa16.24■□□□□ 0.19
UBQLN1-202ENST00000376395 LRRC31Q6UY01 552 aa16.24■□□□□ 0.19
UBQLN1-202ENST00000376395 USP40Q9NVE5 1235 aa16.24■□□□□ 0.19
UBQLN1-202ENST00000376395 FRMD4BQ9Y2L6 1034 aa16.24■□□□□ 0.19
UBQLN1-202ENST00000376395 ATP8A1Q9Y2Q0 1164 aa16.24■□□□□ 0.19
UBQLN1-202ENST00000376395 ITIH6Q6UXX5 1313 aa16.24■□□□□ 0.19
UBQLN1-202ENST00000376395 ARHGAP25P42331 645 aa16.24■□□□□ 0.19
UBQLN1-202ENST00000376395 APBA1Q02410 837 aa16.24■□□□□ 0.19
UBQLN1-202ENST00000376395 EXOC3L4Q17RC7 722 aa16.24■□□□□ 0.19
UBQLN1-202ENST00000376395 FAM83BQ5T0W9 1011 aa16.24■□□□□ 0.19
UBQLN1-202ENST00000376395 FBXW10Q5XX13 1052 aa16.24■□□□□ 0.19
UBQLN1-202ENST00000376395 ZSCAN5CA6NGD5 496 aaPredicted RBP16.23■□□□□ 0.19
UBQLN1-202ENST00000376395 MYMKA6NI61 221 aa16.23■□□□□ 0.19
UBQLN1-202ENST00000376395 MSANTD4Q8NCY6 345 aa16.23■□□□□ 0.19
UBQLN1-202ENST00000376395 DDX47Q9H0S4 455 aaKnown RBP16.23■□□□□ 0.19
UBQLN1-202ENST00000376395 MTRF1LQ9UGC7 380 aaKnown RBP16.23■□□□□ 0.19
UBQLN1-202ENST00000376395 ATP6V0A2Q9Y487 856 aa16.23■□□□□ 0.19
UBQLN1-202ENST00000376395 GFPT2O94808 682 aa16.23■□□□□ 0.19
UBQLN1-202ENST00000376395 EZRP15311 586 aaKnown RBP16.23■□□□□ 0.19
UBQLN1-202ENST00000376395 CARSP49589 748 aaKnown RBP16.23■□□□□ 0.19
UBQLN1-202ENST00000376395 ADCY1Q08828 1119 aa16.23■□□□□ 0.19
UBQLN1-202ENST00000376395 GALNT17Q6IS24 598 aa16.23■□□□□ 0.19
UBQLN1-202ENST00000376395 EMILIN3Q9NT22 766 aa16.23■□□□□ 0.19
UBQLN1-202ENST00000376395 SAMD15Q9P1V8 674 aa16.23■□□□□ 0.19
UBQLN1-202ENST00000376395 A0A1W2PQC6 194 aa16.23■□□□□ 0.19
UBQLN1-202ENST00000376395 CTNNA2P26232 953 aa16.23■□□□□ 0.19
UBQLN1-202ENST00000376395 STAT3P40763 770 aa16.23■□□□□ 0.19
UBQLN1-202ENST00000376395 RCAN1P53805 252 aa16.23■□□□□ 0.19
UBQLN1-202ENST00000376395 TRAPPC11Q7Z392 1133 aa16.23■□□□□ 0.19
UBQLN1-202ENST00000376395 TADA2BQ86TJ2 420 aa16.23■□□□□ 0.19
UBQLN1-202ENST00000376395 CCDC50Q8IVM0 306 aa16.23■□□□□ 0.19
UBQLN1-202ENST00000376395 GIMAP8Q8ND71 665 aaPredicted RBP16.23■□□□□ 0.19
UBQLN1-202ENST00000376395 OR2W6PQ8NHA6 318 aa16.23■□□□□ 0.19
UBQLN1-202ENST00000376395 HNRNPLLQ8WVV9 542 aaKnown RBP16.23■□□□□ 0.19
UBQLN1-202ENST00000376395 NUCKS1Q9H1E3 243 aaKnown RBP16.23■□□□□ 0.19
UBQLN1-202ENST00000376395 CUEDC2Q9H467 287 aa16.23■□□□□ 0.19
UBQLN1-202ENST00000376395 PPP1R1BQ9UD71 204 aaPredicted RBP16.23■□□□□ 0.19
UBQLN1-202ENST00000376395 NWD1Q149M9 1564 aa16.23■□□□□ 0.19
UBQLN1-202ENST00000376395 A0A087WUV0 522 aaPredicted RBP16.22■□□□□ 0.19
UBQLN1-202ENST00000376395 H2AFZP0C0S5 128 aa16.22■□□□□ 0.19
UBQLN1-202ENST00000376395 EEF2P13639 858 aaKnown RBP16.22■□□□□ 0.19
UBQLN1-202ENST00000376395 NR1D1P20393 614 aa16.22■□□□□ 0.19
UBQLN1-202ENST00000376395 SLCO1A2P46721 670 aa16.22■□□□□ 0.19
UBQLN1-202ENST00000376395 CALCOCO2Q13137 446 aa16.22■□□□□ 0.19
UBQLN1-202ENST00000376395 H2AFVQ71UI9 128 aa16.22■□□□□ 0.19
UBQLN1-202ENST00000376395 BICD1Q96G01 975 aa16.22■□□□□ 0.19
UBQLN1-202ENST00000376395 OVOS2A0A0G2JMS6 1433 aa16.22■□□□□ 0.19
UBQLN1-202ENST00000376395 POTEB3A0JP26 581 aa16.22■□□□□ 0.19
UBQLN1-202ENST00000376395 RCCD1A6NED2 376 aa16.22■□□□□ 0.19
UBQLN1-202ENST00000376395 POTECB2RU33 542 aa16.22■□□□□ 0.19
UBQLN1-202ENST00000376395 LAD1O00515 517 aa16.22■□□□□ 0.19
UBQLN1-202ENST00000376395 RHOBTB3O94955 611 aa16.22■□□□□ 0.19
UBQLN1-202ENST00000376395 CAMTA2O94983 1202 aa16.22■□□□□ 0.19
UBQLN1-202ENST00000376395 POTEJP0CG39 1038 aa16.22■□□□□ 0.19
UBQLN1-202ENST00000376395 POTEBQ6S5H4 581 aa16.22■□□□□ 0.19
UBQLN1-202ENST00000376395 EFCAB13Q8IY85 973 aa16.22■□□□□ 0.19
UBQLN1-202ENST00000376395 PSMD14O00487 310 aa16.22■□□□□ 0.19
UBQLN1-202ENST00000376395 EXOC3O60645 756 aa16.22■□□□□ 0.19
UBQLN1-202ENST00000376395 MKRN4PQ13434 485 aaPredicted RBP16.22■□□□□ 0.19
UBQLN1-202ENST00000376395 DDX42Q86XP3 938 aaKnown RBP eCLIP16.22■□□□□ 0.19
UBQLN1-202ENST00000376395 NT5C3AQ9H0P0 336 aa16.22■□□□□ 0.19
UBQLN1-202ENST00000376395 BAIAP2L1Q9UHR4 511 aa16.22■□□□□ 0.19
UBQLN1-202ENST00000376395 NOVA2Q9UNW9 492 aaKnown RBP16.22■□□□□ 0.19
UBQLN1-202ENST00000376395 FAM237AA0A1B0GTK4 181 aa16.21■□□□□ 0.19
UBQLN1-202ENST00000376395 PDE2AO00408 941 aaPredicted RBP16.21■□□□□ 0.19
UBQLN1-202ENST00000376395 MYBL2P10244 700 aa16.21■□□□□ 0.19
UBQLN1-202ENST00000376395 ACTN1P12814 892 aa16.21■□□□□ 0.19
UBQLN1-202ENST00000376395 PRPHP41219 470 aa16.21■□□□□ 0.19
UBQLN1-202ENST00000376395 STAT1P42224 750 aa16.21■□□□□ 0.19
UBQLN1-202ENST00000376395 SEC24CP53992 1094 aa16.21■□□□□ 0.19
UBQLN1-202ENST00000376395 C12orf60Q5U649 245 aa16.21■□□□□ 0.19
UBQLN1-202ENST00000376395 KIAA0825Q8IV33 1275 aa16.21■□□□□ 0.19
UBQLN1-202ENST00000376395 MTA3Q9BTC8 594 aa16.21■□□□□ 0.19
UBQLN1-202ENST00000376395 PLAAQ9Y263 795 aa16.21■□□□□ 0.19
UBQLN1-202ENST00000376395 NTSR2O95665 410 aa16.21■□□□□ 0.19
UBQLN1-202ENST00000376395 IL17AQ16552 155 aa16.21■□□□□ 0.19
UBQLN1-202ENST00000376395 UNC13DQ70J99 1090 aa16.21■□□□□ 0.19
UBQLN1-202ENST00000376395 ARL8AQ96BM9 186 aa16.21■□□□□ 0.19
UBQLN1-202ENST00000376395 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.21■□□□□ 0.19
UBQLN1-202ENST00000376395 ANO9A1A5B4 782 aa16.21■□□□□ 0.19
UBQLN1-202ENST00000376395 CALUO43852 315 aaPredicted RBP16.21■□□□□ 0.19
UBQLN1-202ENST00000376395 IRAK1P51617 712 aa16.21■□□□□ 0.19
UBQLN1-202ENST00000376395 NKX1-1Q15270 411 aaPredicted RBP16.21■□□□□ 0.19
UBQLN1-202ENST00000376395 E2F5Q15329 346 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms