RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 HGSNATQ68CP4 663 aa12.68□□□□□ -0.38
TM9SF2-201ENST00000376387 MAATS1Q7Z4T9 603 aa12.68□□□□□ -0.38
TM9SF2-201ENST00000376387 DNAAF5Q86Y56 855 aa12.68□□□□□ -0.38
TM9SF2-201ENST00000376387 KLHL7Q8IXQ5 586 aa12.68□□□□□ -0.38
TM9SF2-201ENST00000376387 ATP6V1G3Q96LB4 118 aa12.68□□□□□ -0.38
TM9SF2-201ENST00000376387 VCPKMTQ9H867 229 aa12.68□□□□□ -0.38
TM9SF2-201ENST00000376387 RAD51CO43502 376 aa12.68□□□□□ -0.38
TM9SF2-201ENST00000376387 ATP6V1AP38606 617 aa12.68□□□□□ -0.38
TM9SF2-201ENST00000376387 ZKSCAN8Q15776 578 aaPredicted RBP12.68□□□□□ -0.38
TM9SF2-201ENST00000376387 CHADLQ6NUI6 762 aa12.68□□□□□ -0.38
TM9SF2-201ENST00000376387 BRINP3Q76B58 766 aa12.68□□□□□ -0.38
TM9SF2-201ENST00000376387 ANKRD23Q86SG2 305 aa12.68□□□□□ -0.38
TM9SF2-201ENST00000376387 DDX42Q86XP3 938 aaKnown RBP eCLIP12.68□□□□□ -0.38
TM9SF2-201ENST00000376387 FAM114A1Q8IWE2 563 aa12.68□□□□□ -0.38
TM9SF2-201ENST00000376387 ZNF34Q8IZ26 560 aa12.68□□□□□ -0.38
TM9SF2-201ENST00000376387 LRRC4CQ9HCJ2 640 aa12.68□□□□□ -0.38
TM9SF2-201ENST00000376387 KLC4Q9NSK0 619 aa12.68□□□□□ -0.38
TM9SF2-201ENST00000376387 PJA2O43164 708 aa12.67□□□□□ -0.38
TM9SF2-201ENST00000376387 TMOD1P28289 359 aa12.67□□□□□ -0.38
TM9SF2-201ENST00000376387 TECP42680 631 aa12.67□□□□□ -0.38
TM9SF2-201ENST00000376387 DDR1Q08345 913 aa12.67□□□□□ -0.38
TM9SF2-201ENST00000376387 ENOX2Q16206 610 aaKnown RBP12.67□□□□□ -0.38
TM9SF2-201ENST00000376387 NOX5Q96PH1 765 aa12.67□□□□□ -0.38
TM9SF2-201ENST00000376387 PACSIN1Q9BY11 444 aa12.67□□□□□ -0.38
TM9SF2-201ENST00000376387 GOLPH3Q9H4A6 298 aa12.67□□□□□ -0.38
TM9SF2-201ENST00000376387 KANSL2Q9H9L4 492 aa12.67□□□□□ -0.38
TM9SF2-201ENST00000376387 PPME1Q9Y570 386 aa12.67□□□□□ -0.38
TM9SF2-201ENST00000376387 A0A1B0GUL6 1792 aa12.67□□□□□ -0.38
TM9SF2-201ENST00000376387 TLR2O60603 784 aa12.67□□□□□ -0.38
TM9SF2-201ENST00000376387 SSBP05455 408 aaKnown RBP eCLIP12.67□□□□□ -0.38
TM9SF2-201ENST00000376387 EHHADHQ08426 723 aa12.67□□□□□ -0.38
TM9SF2-201ENST00000376387 LRRC41Q15345 812 aa12.67□□□□□ -0.38
TM9SF2-201ENST00000376387 CCDC40Q4G0X9 1142 aa12.67□□□□□ -0.38
TM9SF2-201ENST00000376387 DYMQ7RTS9 669 aa12.67□□□□□ -0.38
TM9SF2-201ENST00000376387 HEATR3Q7Z4Q2 680 aa12.67□□□□□ -0.38
TM9SF2-201ENST00000376387 BRIP1Q9BX63 1249 aa12.67□□□□□ -0.38
TM9SF2-201ENST00000376387 SLC40A1Q9NP59 571 aa12.67□□□□□ -0.38
TM9SF2-201ENST00000376387 CYTH3O43739 400 aa12.66□□□□□ -0.38
TM9SF2-201ENST00000376387 PDHBP11177 359 aa12.66□□□□□ -0.38
TM9SF2-201ENST00000376387 NAT1P18440 290 aa12.66□□□□□ -0.38
TM9SF2-201ENST00000376387 KLRC1P26715 233 aa12.66□□□□□ -0.38
TM9SF2-201ENST00000376387 CALML3P27482 149 aa12.66□□□□□ -0.38
TM9SF2-201ENST00000376387 KCNMA1Q12791 1236 aa12.66□□□□□ -0.38
TM9SF2-201ENST00000376387 PAK2Q13177 524 aa12.66□□□□□ -0.38
TM9SF2-201ENST00000376387 TDRD12Q587J7 1177 aaKnown RBP12.66□□□□□ -0.38
TM9SF2-201ENST00000376387 C6orf89Q6UWU4 347 aa12.66□□□□□ -0.38
TM9SF2-201ENST00000376387 PAIP2Q9BPZ3 127 aaKnown RBP12.66□□□□□ -0.38
TM9SF2-201ENST00000376387 MMTAG2Q9BU76 263 aaKnown RBP12.66□□□□□ -0.38
TM9SF2-201ENST00000376387 TAF1P21675 1872 aa12.66□□□□□ -0.38
TM9SF2-201ENST00000376387 TSPY2A6NKD2 308 aa12.66□□□□□ -0.38
TM9SF2-201ENST00000376387 DNM1LO00429 736 aa12.66□□□□□ -0.38
TM9SF2-201ENST00000376387 RASSF9O75901 435 aa12.66□□□□□ -0.38
TM9SF2-201ENST00000376387 PDXDC1Q6P996 788 aa12.66□□□□□ -0.38
TM9SF2-201ENST00000376387 CYFIP2Q96F07 1278 aa12.66□□□□□ -0.38
TM9SF2-201ENST00000376387 C7orf25Q9BPX7 421 aa12.66□□□□□ -0.38
TM9SF2-201ENST00000376387 PAGR1Q9BTK6 254 aa12.66□□□□□ -0.38
TM9SF2-201ENST00000376387 FAM107AO95990 144 aa12.66□□□□□ -0.38
TM9SF2-201ENST00000376387 ARID5AQ03989 594 aa12.66□□□□□ -0.38
TM9SF2-201ENST00000376387 UAP1Q16222 522 aaPredicted RBP12.66□□□□□ -0.38
TM9SF2-201ENST00000376387 LETM2Q2VYF4 491 aa12.66□□□□□ -0.38
TM9SF2-201ENST00000376387 GLE1Q53GS7 698 aaKnown RBP12.66□□□□□ -0.38
TM9SF2-201ENST00000376387 CENPPQ6IPU0 288 aa12.66□□□□□ -0.38
TM9SF2-201ENST00000376387 FAM228AQ86W67 206 aa12.66□□□□□ -0.38
TM9SF2-201ENST00000376387 NEUROG2Q9H2A3 272 aa12.66□□□□□ -0.38
TM9SF2-201ENST00000376387 IL17RBQ9NRM6 502 aa12.66□□□□□ -0.38
TM9SF2-201ENST00000376387 SUFUQ9UMX1 484 aa12.66□□□□□ -0.38
TM9SF2-201ENST00000376387 DCDC2CA8MYV0 355 aa12.65□□□□□ -0.38
TM9SF2-201ENST00000376387 CCNT1O60563 726 aaKnown RBP12.65□□□□□ -0.38
TM9SF2-201ENST00000376387 MYL1P05976 194 aa12.65□□□□□ -0.38
TM9SF2-201ENST00000376387 GOLGA8HP0CJ92 632 aa12.65□□□□□ -0.38
TM9SF2-201ENST00000376387 ECHS1P30084 290 aa12.65□□□□□ -0.38
TM9SF2-201ENST00000376387 ERVK-9P63128 1117 aa12.65□□□□□ -0.38
TM9SF2-201ENST00000376387 YTHDF3Q7Z739 585 aaKnown RBP12.65□□□□□ -0.38
TM9SF2-201ENST00000376387 CD302Q8IX05 232 aa12.65□□□□□ -0.38
TM9SF2-201ENST00000376387 OSBPL7Q9BZF2 842 aa12.65□□□□□ -0.38
TM9SF2-201ENST00000376387 DDX20Q9UHI6 824 aaKnown RBP12.65□□□□□ -0.38
TM9SF2-201ENST00000376387 JAG2Q9Y219 1238 aa12.65□□□□□ -0.38
TM9SF2-201ENST00000376387 COL5A2P05997 1499 aaPredicted RBP12.65□□□□□ -0.38
TM9SF2-201ENST00000376387 ATP2C2O75185 946 aa12.65□□□□□ -0.38
TM9SF2-201ENST00000376387 FLT3P36888 993 aa12.65□□□□□ -0.38
TM9SF2-201ENST00000376387 EMC10Q5UCC4 262 aa12.65□□□□□ -0.38
TM9SF2-201ENST00000376387 CACNA2D4Q7Z3S7 1137 aa12.65□□□□□ -0.38
TM9SF2-201ENST00000376387 MREGQ8N565 214 aa12.65□□□□□ -0.38
TM9SF2-201ENST00000376387 TMBIM4Q9HC24 238 aa12.65□□□□□ -0.38
TM9SF2-201ENST00000376387 DCP1AQ9NPI6 582 aaPredicted RBP12.65□□□□□ -0.38
TM9SF2-201ENST00000376387 CNOT8Q9UFF9 292 aaKnown RBP12.65□□□□□ -0.38
TM9SF2-201ENST00000376387 MYMKA6NI61 221 aa12.65□□□□□ -0.39
TM9SF2-201ENST00000376387 HSD17B3P37058 310 aa12.65□□□□□ -0.39
TM9SF2-201ENST00000376387 IGHMBP2P38935 993 aaKnown RBP12.65□□□□□ -0.39
TM9SF2-201ENST00000376387 SF3A3Q12874 501 aaKnown RBP eCLIP12.65□□□□□ -0.39
TM9SF2-201ENST00000376387 CDC37Q16543 378 aaPredicted RBP12.65□□□□□ -0.39
TM9SF2-201ENST00000376387 MAN2A1Q16706 1144 aa12.65□□□□□ -0.39
TM9SF2-201ENST00000376387 MICALCLQ6ZW33 695 aa12.65□□□□□ -0.39
TM9SF2-201ENST00000376387 INPP4AQ96PE3 977 aaPredicted RBP12.65□□□□□ -0.39
TM9SF2-201ENST00000376387 TANGO6Q9C0B7 1094 aa12.65□□□□□ -0.39
TM9SF2-201ENST00000376387 SLAIN2Q9P270 581 aa12.65□□□□□ -0.39
TM9SF2-201ENST00000376387 NOL4O94818 638 aa12.64□□□□□ -0.39
TM9SF2-201ENST00000376387 KLRK1P26718 216 aa12.64□□□□□ -0.39
TM9SF2-201ENST00000376387 SMTNP53814 917 aa12.64□□□□□ -0.39
TM9SF2-201ENST00000376387 SPATS2Q86XZ4 545 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms