RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 STIM2Q9P246 746 aa14.88□□□□□ -0.03
C9orf47-203ENST00000375851 NEXMIFQ5QGS0 1516 aa14.88□□□□□ -0.03
C9orf47-203ENST00000375851 TBC1D8O95759 1140 aa14.88□□□□□ -0.03
C9orf47-203ENST00000375851 CUL4BQ13620 913 aa14.88□□□□□ -0.03
C9orf47-203ENST00000375851 CEP85LQ5SZL2 805 aa14.88□□□□□ -0.03
C9orf47-203ENST00000375851 SEPT14Q6ZU15 432 aa14.88□□□□□ -0.03
C9orf47-203ENST00000375851 RNF169Q8NCN4 708 aa14.88□□□□□ -0.03
C9orf47-203ENST00000375851 CABS1Q96KC9 395 aa14.88□□□□□ -0.03
C9orf47-203ENST00000375851 ADAMTS13Q76LX8 1427 aa14.88□□□□□ -0.03
C9orf47-203ENST00000375851 PNPLA7Q6ZV29 1317 aa14.88□□□□□ -0.03
C9orf47-203ENST00000375851 LRRN2O75325 713 aa14.88□□□□□ -0.03
C9orf47-203ENST00000375851 POLR2BP30876 1174 aaKnown RBP14.88□□□□□ -0.03
C9orf47-203ENST00000375851 EXOSC10Q01780 885 aaKnown RBP14.88□□□□□ -0.03
C9orf47-203ENST00000375851 ITIH3Q06033 890 aa14.88□□□□□ -0.03
C9orf47-203ENST00000375851 DALRD3Q5D0E6 543 aaKnown RBP14.88□□□□□ -0.03
C9orf47-203ENST00000375851 SCYL2Q6P3W7 929 aa14.88□□□□□ -0.03
C9orf47-203ENST00000375851 CASC4Q6P4E1 433 aa14.88□□□□□ -0.03
C9orf47-203ENST00000375851 PPM1EQ8WY54 764 aa14.88□□□□□ -0.03
C9orf47-203ENST00000375851 TMEM206Q9H813 350 aa14.88□□□□□ -0.03
C9orf47-203ENST00000375851 VPS37BQ9H9H4 285 aa14.88□□□□□ -0.03
C9orf47-203ENST00000375851 HESX1Q9UBX0 185 aa14.88□□□□□ -0.03
C9orf47-203ENST00000375851 ATF7P17544 494 aaPredicted RBP14.87□□□□□ -0.03
C9orf47-203ENST00000375851 MESDQ14696 234 aa14.87□□□□□ -0.03
C9orf47-203ENST00000375851 HADHQ16836 314 aaKnown RBP14.87□□□□□ -0.03
C9orf47-203ENST00000375851 SMIM5Q71RC9 77 aa14.87□□□□□ -0.03
C9orf47-203ENST00000375851 INO80B-WBP1J3KQ70 363 aa14.87□□□□□ -0.03
C9orf47-203ENST00000375851 MYO1FO00160 1098 aa14.87□□□□□ -0.03
C9orf47-203ENST00000375851 LRRC63Q05C16 580 aa14.87□□□□□ -0.03
C9orf47-203ENST00000375851 HHATQ5VTY9 493 aa14.87□□□□□ -0.03
C9orf47-203ENST00000375851 CLEC17AQ6ZS10 378 aa14.87□□□□□ -0.03
C9orf47-203ENST00000375851 ZNF341Q9BYN7 854 aa14.87□□□□□ -0.03
C9orf47-203ENST00000375851 INO80BQ9C086 356 aaPredicted RBP14.87□□□□□ -0.03
C9orf47-203ENST00000375851 USP17L15C9J2P7 530 aa14.87□□□□□ -0.03
C9orf47-203ENST00000375851 USP17L13C9JLJ4 530 aa14.87□□□□□ -0.03
C9orf47-203ENST00000375851 USP17L11C9JVI0 530 aa14.87□□□□□ -0.03
C9orf47-203ENST00000375851 USP17L18D6R9N7 530 aa14.87□□□□□ -0.03
C9orf47-203ENST00000375851 USP17L22D6RA61 530 aa14.87□□□□□ -0.03
C9orf47-203ENST00000375851 USP17L17D6RBQ6 530 aa14.87□□□□□ -0.03
C9orf47-203ENST00000375851 USP17L19D6RCP7 530 aa14.87□□□□□ -0.03
C9orf47-203ENST00000375851 USP17L20D6RJB6 530 aa14.87□□□□□ -0.03
C9orf47-203ENST00000375851 RGS16O15492 202 aaPredicted RBP14.87□□□□□ -0.03
C9orf47-203ENST00000375851 ADCY8P40145 1251 aa14.87□□□□□ -0.03
C9orf47-203ENST00000375851 USP17L24Q0WX57 530 aa14.87□□□□□ -0.03
C9orf47-203ENST00000375851 AP3B2Q13367 1082 aa14.87□□□□□ -0.03
C9orf47-203ENST00000375851 TCP11X2Q5H9J9 407 aa14.87□□□□□ -0.03
C9orf47-203ENST00000375851 USP17L6PQ6QN14 398 aa14.87□□□□□ -0.03
C9orf47-203ENST00000375851 SARM1Q6SZW1 724 aa14.87□□□□□ -0.03
C9orf47-203ENST00000375851 PLEKHG2Q9H7P9 1386 aa14.87□□□□□ -0.03
C9orf47-203ENST00000375851 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.87□□□□□ -0.03
C9orf47-203ENST00000375851 POTEMA6NI47 508 aa14.87□□□□□ -0.03
C9orf47-203ENST00000375851 HGSO14964 777 aaPredicted RBP14.87□□□□□ -0.03
C9orf47-203ENST00000375851 PIK3CAP42336 1068 aa14.87□□□□□ -0.03
C9orf47-203ENST00000375851 CYP27A1Q02318 531 aa14.87□□□□□ -0.03
C9orf47-203ENST00000375851 LGSNQ5TDP6 509 aa14.87□□□□□ -0.03
C9orf47-203ENST00000375851 CCDC125Q86Z20 511 aa14.87□□□□□ -0.03
C9orf47-203ENST00000375851 DCAF4Q8WV16 495 aa14.87□□□□□ -0.03
C9orf47-203ENST00000375851 PPANQ9NQ55 473 aaKnown RBP14.87□□□□□ -0.03
C9orf47-203ENST00000375851 PLCB1Q9NQ66 1216 aa14.87□□□□□ -0.03
C9orf47-203ENST00000375851 CCNA1P78396 465 aa14.86□□□□□ -0.03
C9orf47-203ENST00000375851 GUCY2DQ02846 1103 aa14.86□□□□□ -0.03
C9orf47-203ENST00000375851 CTTNQ14247 550 aaKnown RBP14.86□□□□□ -0.03
C9orf47-203ENST00000375851 ARID5BQ14865 1188 aa14.86□□□□□ -0.03
C9orf47-203ENST00000375851 DPP9Q86TI2 863 aa14.86□□□□□ -0.03
C9orf47-203ENST00000375851 ZNF34Q8IZ26 560 aa14.86□□□□□ -0.03
C9orf47-203ENST00000375851 FAM133AQ8N9E0 248 aa14.86□□□□□ -0.03
C9orf47-203ENST00000375851 RSAD2Q8WXG1 361 aa14.86□□□□□ -0.03
C9orf47-203ENST00000375851 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.86□□□□□ -0.03
C9orf47-203ENST00000375851 NDUFA10O95299 355 aa14.86□□□□□ -0.03
C9orf47-203ENST00000375851 CSF1RP07333 972 aa14.86□□□□□ -0.03
C9orf47-203ENST00000375851 EIF4A3P38919 411 aaKnown RBP14.86□□□□□ -0.03
C9orf47-203ENST00000375851 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.86□□□□□ -0.03
C9orf47-203ENST00000375851 GPSM2P81274 684 aa14.86□□□□□ -0.03
C9orf47-203ENST00000375851 GRM4Q14833 912 aa14.86□□□□□ -0.03
C9orf47-203ENST00000375851 FYB2Q5VWT5 728 aa14.86□□□□□ -0.03
C9orf47-203ENST00000375851 CCDC170Q8IYT3 715 aa14.86□□□□□ -0.03
C9orf47-203ENST00000375851 GJD4Q96KN9 370 aaPredicted RBP14.86□□□□□ -0.03
C9orf47-203ENST00000375851 JPH2Q9BR39 696 aaPredicted RBP14.86□□□□□ -0.03
C9orf47-203ENST00000375851 GCNT4Q9P109 453 aa14.86□□□□□ -0.03
C9orf47-203ENST00000375851 TFDP1Q14186 410 aa14.86□□□□□ -0.03
C9orf47-203ENST00000375851 PANX2Q96RD6 677 aa14.86□□□□□ -0.03
C9orf47-203ENST00000375851 SPTLC3Q9NUV7 552 aa14.86□□□□□ -0.03
C9orf47-203ENST00000375851 TTLL3Q9Y4R7 772 aa14.86□□□□□ -0.03
C9orf47-203ENST00000375851 ORC4O43929 436 aa14.85□□□□□ -0.03
C9orf47-203ENST00000375851 RNF8O76064 485 aa14.85□□□□□ -0.03
C9orf47-203ENST00000375851 HOXA7P31268 230 aaPredicted RBP14.85□□□□□ -0.03
C9orf47-203ENST00000375851 PCDHA6Q9UN73 950 aa14.85□□□□□ -0.03
C9orf47-203ENST00000375851 PCDHA8Q9Y5H6 950 aa14.85□□□□□ -0.03
C9orf47-203ENST00000375851 INO80Q9ULG1 1556 aaPredicted RBP14.85□□□□□ -0.03
C9orf47-203ENST00000375851 USP17L10C9JJH3 530 aa14.85□□□□□ -0.03
C9orf47-203ENST00000375851 STAM2O75886 525 aa14.85□□□□□ -0.03
C9orf47-203ENST00000375851 TXNRD1Q16881 649 aa14.85□□□□□ -0.03
C9orf47-203ENST00000375851 MAP7D1Q3KQU3 841 aa14.85□□□□□ -0.03
C9orf47-203ENST00000375851 BSPRYQ5W0U4 402 aa14.85□□□□□ -0.03
C9orf47-203ENST00000375851 MIS18BP1Q6P0N0 1132 aa14.85□□□□□ -0.03
C9orf47-203ENST00000375851 EEPD1Q7L9B9 569 aa14.85□□□□□ -0.03
C9orf47-203ENST00000375851 CTAGE3PQ8IX95 158 aa14.85□□□□□ -0.03
C9orf47-203ENST00000375851 RAB3IL1Q8TBN0 382 aa14.85□□□□□ -0.03
C9orf47-203ENST00000375851 NACA2Q9H009 215 aa14.85□□□□□ -0.03
C9orf47-203ENST00000375851 PHLPP2Q6ZVD8 1323 aa14.85□□□□□ -0.03
C9orf47-203ENST00000375851 ECE2O60344 883 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms