RNA–Protein interactions for RNA: ENST00000375001.7

COL15A1-201, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL15A1, Length 5,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-201ENST00000375001 CCDC24Q8N4L8 307 aa21.42■■□□□ 1.02
COL15A1-201ENST00000375001 LINC00301Q8NCQ3 95 aa21.42■■□□□ 1.02
COL15A1-201ENST00000375001 GSDMAQ96QA5 445 aa21.42■■□□□ 1.02
COL15A1-201ENST00000375001 C6orf118Q5T5N4 469 aa21.42■■□□□ 1.02
COL15A1-201ENST00000375001 TGFBRAP1Q8WUH2 860 aa21.42■■□□□ 1.02
COL15A1-201ENST00000375001 GJA10Q969M2 543 aa21.42■■□□□ 1.02
COL15A1-201ENST00000375001 OR52Z1P0C646 297 aa21.42■■□□□ 1.02
COL15A1-201ENST00000375001 MYLK4Q86YV6 388 aaPredicted RBP21.42■■□□□ 1.02
COL15A1-201ENST00000375001 GRAMD1CQ8IYS0 662 aa21.42■■□□□ 1.02
COL15A1-201ENST00000375001 ADGBQ8N7X0 1667 aa21.42■■□□□ 1.02
COL15A1-201ENST00000375001 DCTN3O75935 186 aa21.42■■□□□ 1.02
COL15A1-201ENST00000375001 PARP9Q8IXQ6 854 aa21.42■■□□□ 1.02
COL15A1-201ENST00000375001 USP6NLQ92738 828 aa21.42■■□□□ 1.02
COL15A1-201ENST00000375001 PCDHA12Q9UN75 941 aa21.42■■□□□ 1.02
COL15A1-201ENST00000375001 FAM102BQ5T8I3 360 aa21.41■■□□□ 1.02
COL15A1-201ENST00000375001 VSTM4Q8IW00 320 aa21.41■■□□□ 1.02
COL15A1-201ENST00000375001 GAS7O60861 476 aa21.41■■□□□ 1.02
COL15A1-201ENST00000375001 GGCXP38435 758 aa21.41■■□□□ 1.02
COL15A1-201ENST00000375001 ZMYM1Q5SVZ6 1142 aa21.41■■□□□ 1.02
COL15A1-201ENST00000375001 PDZD4Q76G19 769 aaPredicted RBP21.41■■□□□ 1.02
COL15A1-201ENST00000375001 ARHGEF10LQ9HCE6 1279 aa21.41■■□□□ 1.02
COL15A1-201ENST00000375001 CAPN9O14815 690 aa21.41■■□□□ 1.02
COL15A1-201ENST00000375001 ZBTB22O15209 634 aa21.41■■□□□ 1.02
COL15A1-201ENST00000375001 CPP00450 1065 aa21.41■■□□□ 1.02
COL15A1-201ENST00000375001 SLFN14P0C7P3 912 aa21.41■■□□□ 1.02
COL15A1-201ENST00000375001 CYP27A1Q02318 531 aa21.41■■□□□ 1.02
COL15A1-201ENST00000375001 ATG16L1Q676U5 607 aa21.41■■□□□ 1.02
COL15A1-201ENST00000375001 GPKOWQ92917 476 aaPredicted RBP eCLIP21.41■■□□□ 1.02
COL15A1-201ENST00000375001 PBKQ96KB5 322 aa21.41■■□□□ 1.02
COL15A1-201ENST00000375001 DNAJC17Q9NVM6 304 aaKnown RBP21.41■■□□□ 1.02
COL15A1-201ENST00000375001 K7ENM7 598 aa21.41■■□□□ 1.02
COL15A1-201ENST00000375001 PPP6R2O75170 966 aa21.41■■□□□ 1.02
COL15A1-201ENST00000375001 BEND6Q5SZJ8 279 aaPredicted RBP21.41■■□□□ 1.02
COL15A1-201ENST00000375001 FAM47EQ6ZV65 393 aa21.41■■□□□ 1.02
COL15A1-201ENST00000375001 CPXCR1Q8N123 301 aa21.41■■□□□ 1.02
COL15A1-201ENST00000375001 UPF3AQ9H1J1 476 aaKnown RBP21.41■■□□□ 1.02
COL15A1-201ENST00000375001 PPP1R12AO14974 1030 aaPredicted RBP21.4■■□□□ 1.02
COL15A1-201ENST00000375001 FAM178BQ8IXR5 827 aa21.4■■□□□ 1.02
COL15A1-201ENST00000375001 DDX17Q92841 729 aaKnown RBP21.4■■□□□ 1.02
COL15A1-201ENST00000375001 PUS3Q9BZE2 481 aaKnown RBP21.4■■□□□ 1.02
COL15A1-201ENST00000375001 SUFUQ9UMX1 484 aa21.4■■□□□ 1.02
COL15A1-201ENST00000375001 KIF21AQ7Z4S6 1674 aa21.4■■□□□ 1.02
COL15A1-201ENST00000375001 GNPATO15228 680 aa21.4■■□□□ 1.02
COL15A1-201ENST00000375001 NDUFA10O95299 355 aa21.4■■□□□ 1.02
COL15A1-201ENST00000375001 ADORA1P30542 326 aa21.4■■□□□ 1.02
COL15A1-201ENST00000375001 ZBTB41Q5SVQ8 909 aa21.4■■□□□ 1.02
COL15A1-201ENST00000375001 NHEJ1Q9H9Q4 299 aaPredicted RBP21.4■■□□□ 1.02
COL15A1-201ENST00000375001 SAMSN1Q9NSI8 373 aaKnown RBP21.4■■□□□ 1.02
COL15A1-201ENST00000375001 BTG4Q9NY30 223 aa21.4■■□□□ 1.02
COL15A1-201ENST00000375001 SAMD9Q5K651 1589 aa21.4■■□□□ 1.02
COL15A1-201ENST00000375001 ACSL3O95573 720 aa21.4■■□□□ 1.02
COL15A1-201ENST00000375001 CTSWP56202 376 aa21.4■■□□□ 1.02
COL15A1-201ENST00000375001 SKOR1P84550 965 aa21.4■■□□□ 1.02
COL15A1-201ENST00000375001 PMS1P54277 932 aaKnown RBP21.4■■□□□ 1.02
COL15A1-201ENST00000375001 ADCY2Q08462 1091 aa21.4■■□□□ 1.02
COL15A1-201ENST00000375001 RESTQ13127 1097 aa21.4■■□□□ 1.02
COL15A1-201ENST00000375001 RETREG2Q8NC44 543 aa21.4■■□□□ 1.02
COL15A1-201ENST00000375001 POLR2BP30876 1174 aaKnown RBP21.39■■□□□ 1.02
COL15A1-201ENST00000375001 ZNF653Q96CK0 615 aa21.39■■□□□ 1.02
COL15A1-201ENST00000375001 PPARGC1AQ9UBK2 798 aaKnown RBP21.39■■□□□ 1.02
COL15A1-201ENST00000375001 TMOD1P28289 359 aa21.39■■□□□ 1.02
COL15A1-201ENST00000375001 MAPK4P31152 587 aa21.39■■□□□ 1.02
COL15A1-201ENST00000375001 EIF4A3P38919 411 aaKnown RBP21.39■■□□□ 1.02
COL15A1-201ENST00000375001 NEK2P51955 445 aa21.39■■□□□ 1.02
COL15A1-201ENST00000375001 DR1Q01658 176 aa21.39■■□□□ 1.02
COL15A1-201ENST00000375001 RAB44Q7Z6P3 723 aaPredicted RBP21.39■■□□□ 1.02
COL15A1-201ENST00000375001 DEPTORQ8TB45 409 aa21.39■■□□□ 1.02
COL15A1-201ENST00000375001 ATP6V1E2Q96A05 226 aa21.39■■□□□ 1.02
COL15A1-201ENST00000375001 CHMP6Q96FZ7 201 aa21.39■■□□□ 1.02
COL15A1-201ENST00000375001 AZI2Q9H6S1 392 aa21.39■■□□□ 1.02
COL15A1-201ENST00000375001 ARHGEF9O43307 516 aa21.39■■□□□ 1.01
COL15A1-201ENST00000375001 DAB2P98082 770 aa21.39■■□□□ 1.01
COL15A1-201ENST00000375001 KMT5BQ4FZB7 885 aa21.39■■□□□ 1.01
COL15A1-201ENST00000375001 NSMFQ6X4W1 530 aa21.39■■□□□ 1.01
COL15A1-201ENST00000375001 SCG2P13521 617 aa21.39■■□□□ 1.01
COL15A1-201ENST00000375001 NAA30Q147X3 362 aaPredicted RBP21.39■■□□□ 1.01
COL15A1-201ENST00000375001 C4orf50Q6ZRC1 276 aa21.39■■□□□ 1.01
COL15A1-201ENST00000375001 LZTS1Q9Y250 596 aa21.39■■□□□ 1.01
COL15A1-201ENST00000375001 KIF23Q02241 960 aaPredicted RBP21.39■■□□□ 1.01
COL15A1-201ENST00000375001 APOA5Q6Q788 366 aa21.39■■□□□ 1.01
COL15A1-201ENST00000375001 ENOX1Q8TC92 643 aaKnown RBP21.39■■□□□ 1.01
COL15A1-201ENST00000375001 MED23Q9ULK4 1368 aa21.38■■□□□ 1.01
COL15A1-201ENST00000375001 PLS3P13797 630 aa21.38■■□□□ 1.01
COL15A1-201ENST00000375001 BASP1P80723 227 aaKnown RBP21.38■■□□□ 1.01
COL15A1-201ENST00000375001 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.38■■□□□ 1.01
COL15A1-201ENST00000375001 SKA2Q8WVK7 121 aaPredicted RBP21.38■■□□□ 1.01
COL15A1-201ENST00000375001 SMYD3Q9H7B4 428 aa21.38■■□□□ 1.01
COL15A1-201ENST00000375001 RASSF10A6NK89 507 aa21.38■■□□□ 1.01
COL15A1-201ENST00000375001 BCAMP50895 628 aa21.38■■□□□ 1.01
COL15A1-201ENST00000375001 PCGF5Q86SE9 256 aa21.38■■□□□ 1.01
COL15A1-201ENST00000375001 MAP7D3Q8IWC1 876 aa21.38■■□□□ 1.01
COL15A1-201ENST00000375001 SYNJ2BP-COX16A0A087WUM0 186 aa21.38■■□□□ 1.01
COL15A1-201ENST00000375001 LIG4P49917 911 aa21.38■■□□□ 1.01
COL15A1-201ENST00000375001 FAM133AQ8N9E0 248 aa21.38■■□□□ 1.01
COL15A1-201ENST00000375001 COX16Q9P0S2 106 aa21.38■■□□□ 1.01
COL15A1-201ENST00000375001 MAST3O60307 1309 aa21.38■■□□□ 1.01
COL15A1-201ENST00000375001 M0R2C6 588 aa21.38■■□□□ 1.01
COL15A1-201ENST00000375001 ARMCX5Q6P1M9 558 aa21.38■■□□□ 1.01
COL15A1-201ENST00000375001 TTLL11Q8NHH1 800 aa21.38■■□□□ 1.01
COL15A1-201ENST00000375001 ACTN1P12814 892 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms