RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 RTKN2Q8IZC4 609 aa12.27□□□□□ -0.44
CCDC40-203ENST00000374877 IFT81Q8WYA0 676 aa12.27□□□□□ -0.44
CCDC40-203ENST00000374877 ERGIC2Q96RQ1 377 aa12.27□□□□□ -0.44
CCDC40-203ENST00000374877 RBM12Q9NTZ6 932 aaKnown RBP12.27□□□□□ -0.44
CCDC40-203ENST00000374877 TCP11L1Q9NUJ3 509 aa12.27□□□□□ -0.44
CCDC40-203ENST00000374877 PLAGL2Q9UPG8 496 aa12.27□□□□□ -0.44
CCDC40-203ENST00000374877 ATF5Q9Y2D1 282 aaPredicted RBP12.27□□□□□ -0.44
CCDC40-203ENST00000374877 ESYT3A0FGR9 886 aa12.27□□□□□ -0.45
CCDC40-203ENST00000374877 NNTQ13423 1086 aa12.27□□□□□ -0.45
CCDC40-203ENST00000374877 ALS2CLQ60I27 953 aa12.27□□□□□ -0.45
CCDC40-203ENST00000374877 PODNQ7Z5L7 613 aa12.27□□□□□ -0.45
CCDC40-203ENST00000374877 STAG2Q8N3U4 1231 aa12.27□□□□□ -0.45
CCDC40-203ENST00000374877 ZNF384Q8TF68 577 aa12.27□□□□□ -0.45
CCDC40-203ENST00000374877 MS4A14Q96JA4 679 aa12.27□□□□□ -0.45
CCDC40-203ENST00000374877 TRIM9Q9C026 710 aa12.27□□□□□ -0.45
CCDC40-203ENST00000374877 CCSER1Q9C0I3 900 aa12.27□□□□□ -0.45
CCDC40-203ENST00000374877 VPS33BQ9H267 617 aa12.27□□□□□ -0.45
CCDC40-203ENST00000374877 SLC39A2Q9NP94 309 aa12.27□□□□□ -0.45
CCDC40-203ENST00000374877 A0A1W2PQJ5 194 aa12.27□□□□□ -0.45
CCDC40-203ENST00000374877 LDHCP07864 332 aa12.27□□□□□ -0.45
CCDC40-203ENST00000374877 PCP11498 1178 aaKnown RBP12.27□□□□□ -0.45
CCDC40-203ENST00000374877 PRDX5P30044 214 aa12.27□□□□□ -0.45
CCDC40-203ENST00000374877 HNRNPH1P31943 449 aaKnown RBP12.27□□□□□ -0.45
CCDC40-203ENST00000374877 FKBP1AP62942 108 aaKnown RBP12.27□□□□□ -0.45
CCDC40-203ENST00000374877 CDK17Q00537 523 aa12.27□□□□□ -0.45
CCDC40-203ENST00000374877 DZIP1Q86YF9 867 aaKnown RBP12.27□□□□□ -0.45
CCDC40-203ENST00000374877 CCDC43Q96MW1 224 aaKnown RBP12.27□□□□□ -0.45
CCDC40-203ENST00000374877 CAPN7Q9Y6W3 813 aa12.27□□□□□ -0.45
CCDC40-203ENST00000374877 RASSF7Q02833 373 aa12.26□□□□□ -0.45
CCDC40-203ENST00000374877 ITIH3Q06033 890 aa12.26□□□□□ -0.45
CCDC40-203ENST00000374877 CFAP58Q5T655 872 aa12.26□□□□□ -0.45
CCDC40-203ENST00000374877 PSMD1Q99460 953 aa12.26□□□□□ -0.45
CCDC40-203ENST00000374877 NFU1Q9UMS0 254 aa12.26□□□□□ -0.45
CCDC40-203ENST00000374877 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.26□□□□□ -0.45
CCDC40-203ENST00000374877 LRRC53A6NM62 1247 aa12.26□□□□□ -0.45
CCDC40-203ENST00000374877 TDRD12Q587J7 1177 aaKnown RBP12.26□□□□□ -0.45
CCDC40-203ENST00000374877 FIGNQ5HY92 759 aa12.26□□□□□ -0.45
CCDC40-203ENST00000374877 SLF2Q8IX21 1173 aa12.26□□□□□ -0.45
CCDC40-203ENST00000374877 OTUD6BQ8N6M0 293 aa12.26□□□□□ -0.45
CCDC40-203ENST00000374877 SALL4Q9UJQ4 1053 aa12.26□□□□□ -0.45
CCDC40-203ENST00000374877 PCDHA6Q9UN73 950 aa12.26□□□□□ -0.45
CCDC40-203ENST00000374877 PCDHA8Q9Y5H6 950 aa12.26□□□□□ -0.45
CCDC40-203ENST00000374877 ZSCAN5CA6NGD5 496 aaPredicted RBP12.25□□□□□ -0.45
CCDC40-203ENST00000374877 RIMBP2O15034 1052 aa12.25□□□□□ -0.45
CCDC40-203ENST00000374877 FGRP09769 529 aa12.25□□□□□ -0.45
CCDC40-203ENST00000374877 PRLRP16471 622 aa12.25□□□□□ -0.45
CCDC40-203ENST00000374877 CARSP49589 748 aaKnown RBP12.25□□□□□ -0.45
CCDC40-203ENST00000374877 GUCY2FP51841 1108 aa12.25□□□□□ -0.45
CCDC40-203ENST00000374877 GFPT1Q06210 699 aaPredicted RBP12.25□□□□□ -0.45
CCDC40-203ENST00000374877 NDST4Q9H3R1 872 aa12.25□□□□□ -0.45
CCDC40-203ENST00000374877 PIM2Q9P1W9 311 aa12.25□□□□□ -0.45
CCDC40-203ENST00000374877 ORC4O43929 436 aa12.25□□□□□ -0.45
CCDC40-203ENST00000374877 EPB41P11171 864 aaKnown RBP12.25□□□□□ -0.45
CCDC40-203ENST00000374877 GUCY2DQ02846 1103 aa12.25□□□□□ -0.45
CCDC40-203ENST00000374877 LETM2Q2VYF4 491 aa12.25□□□□□ -0.45
CCDC40-203ENST00000374877 VWA3BQ502W6 1294 aa12.25□□□□□ -0.45
CCDC40-203ENST00000374877 B4GALNT4Q76KP1 1039 aa12.25□□□□□ -0.45
CCDC40-203ENST00000374877 CACNA2D4Q7Z3S7 1137 aa12.25□□□□□ -0.45
CCDC40-203ENST00000374877 ZSCAN29Q8IWY8 852 aaPredicted RBP12.25□□□□□ -0.45
CCDC40-203ENST00000374877 RUBCNQ92622 972 aa12.25□□□□□ -0.45
CCDC40-203ENST00000374877 FAM163AQ96GL9 167 aaPredicted RBP12.25□□□□□ -0.45
CCDC40-203ENST00000374877 NCAPGQ9BPX3 1015 aa12.25□□□□□ -0.45
CCDC40-203ENST00000374877 EPB41L5Q9HCM4 733 aa12.25□□□□□ -0.45
CCDC40-203ENST00000374877 DCP1AQ9NPI6 582 aaPredicted RBP12.25□□□□□ -0.45
CCDC40-203ENST00000374877 RNASE9P60153 205 aaKnown RBP12.25□□□□□ -0.45
CCDC40-203ENST00000374877 PPP4CP60510 307 aa12.25□□□□□ -0.45
CCDC40-203ENST00000374877 SKOR1P84550 965 aa12.25□□□□□ -0.45
CCDC40-203ENST00000374877 GUCY1A3Q02108 690 aa12.25□□□□□ -0.45
CCDC40-203ENST00000374877 PPARDQ03181 441 aa12.25□□□□□ -0.45
CCDC40-203ENST00000374877 ZNF572Q7Z3I7 529 aaPredicted RBP12.25□□□□□ -0.45
CCDC40-203ENST00000374877 IFT20Q8IY31 132 aa12.25□□□□□ -0.45
CCDC40-203ENST00000374877 PNMA1Q8ND90 353 aa12.25□□□□□ -0.45
CCDC40-203ENST00000374877 MTMR8Q96EF0 704 aa12.25□□□□□ -0.45
CCDC40-203ENST00000374877 NOX5Q96PH1 765 aa12.25□□□□□ -0.45
CCDC40-203ENST00000374877 TANGO6Q9C0B7 1094 aa12.25□□□□□ -0.45
CCDC40-203ENST00000374877 LOC102724159A0A0B4J2E5 919 aa12.24□□□□□ -0.45
CCDC40-203ENST00000374877 HEXIM1O94992 359 aaKnown RBP12.24□□□□□ -0.45
CCDC40-203ENST00000374877 GLI1P08151 1106 aa12.24□□□□□ -0.45
CCDC40-203ENST00000374877 FAM153BP0C7A2 387 aa12.24□□□□□ -0.45
CCDC40-203ENST00000374877 USP8P40818 1118 aa12.24□□□□□ -0.45
CCDC40-203ENST00000374877 PTGER2P43116 358 aa12.24□□□□□ -0.45
CCDC40-203ENST00000374877 PWP2Q15269 919 aaKnown RBP12.24□□□□□ -0.45
CCDC40-203ENST00000374877 FAM153CQ494X1 144 aa12.24□□□□□ -0.45
CCDC40-203ENST00000374877 CFAP221Q4G0U5 840 aa12.24□□□□□ -0.45
CCDC40-203ENST00000374877 RCSD1Q6JBY9 416 aa12.24□□□□□ -0.45
CCDC40-203ENST00000374877 CNNM4Q6P4Q7 775 aa12.24□□□□□ -0.45
CCDC40-203ENST00000374877 KCNV1Q6PIU1 500 aa12.24□□□□□ -0.45
CCDC40-203ENST00000374877 KIAA0895Q8NCT3 520 aa12.24□□□□□ -0.45
CCDC40-203ENST00000374877 CAVIN3Q969G5 261 aa12.24□□□□□ -0.45
CCDC40-203ENST00000374877 RNPC3Q96LT9 517 aaKnown RBP12.24□□□□□ -0.45
CCDC40-203ENST00000374877 MYCBPQ99417 103 aaPredicted RBP12.24□□□□□ -0.45
CCDC40-203ENST00000374877 TLR10Q9BXR5 811 aa12.24□□□□□ -0.45
CCDC40-203ENST00000374877 CRNKL1Q9BZJ0 848 aaKnown RBP12.24□□□□□ -0.45
CCDC40-203ENST00000374877 SEMA6BQ9H3T3 888 aa12.24□□□□□ -0.45
CCDC40-203ENST00000374877 GEMIN8Q9NWZ8 242 aaKnown RBP12.24□□□□□ -0.45
CCDC40-203ENST00000374877 FAM153AQ9UHL3 310 aa12.24□□□□□ -0.45
CCDC40-203ENST00000374877 CCDC88AQ3V6T2 1871 aa12.24□□□□□ -0.45
CCDC40-203ENST00000374877 CCNT1O60563 726 aaKnown RBP12.24□□□□□ -0.45
CCDC40-203ENST00000374877 TECP42680 631 aa12.24□□□□□ -0.45
CCDC40-203ENST00000374877 SLC1A4P43007 532 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms