RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 TIMM10P62072 90 aa11.12□□□□□ -0.63
CD28-202ENST00000374481 MED21Q13503 144 aa11.12□□□□□ -0.63
CD28-202ENST00000374481 SHC4Q6S5L8 630 aa11.12□□□□□ -0.63
CD28-202ENST00000374481 LRRC34Q8IZ02 419 aa11.12□□□□□ -0.63
CD28-202ENST00000374481 FAM133AQ8N9E0 248 aa11.12□□□□□ -0.63
CD28-202ENST00000374481 U2AF1L4Q8WU68 220 aaKnown RBP11.12□□□□□ -0.63
CD28-202ENST00000374481 IL25Q9H293 177 aa11.12□□□□□ -0.63
CD28-202ENST00000374481 GALNT8Q9NY28 637 aa11.12□□□□□ -0.63
CD28-202ENST00000374481 UBAP1Q9NZ09 502 aa11.12□□□□□ -0.63
CD28-202ENST00000374481 PASKQ96RG2 1323 aa11.11□□□□□ -0.63
CD28-202ENST00000374481 ATXN2Q99700 1313 aaKnown RBP11.11□□□□□ -0.63
CD28-202ENST00000374481 PLCH2O75038 1416 aa11.11□□□□□ -0.63
CD28-202ENST00000374481 GYPCP04921 128 aa11.11□□□□□ -0.63
CD28-202ENST00000374481 ABCB4P21439 1286 aa11.11□□□□□ -0.63
CD28-202ENST00000374481 ZNF658Q5TYW1 1059 aaPredicted RBP11.11□□□□□ -0.63
CD28-202ENST00000374481 LRRC43Q8N309 656 aa11.11□□□□□ -0.63
CD28-202ENST00000374481 PIGOQ8TEQ8 1089 aa11.11□□□□□ -0.63
CD28-202ENST00000374481 AIFM3Q96NN9 605 aa11.11□□□□□ -0.63
CD28-202ENST00000374481 SLC39A2Q9NP94 309 aa11.11□□□□□ -0.63
CD28-202ENST00000374481 TRAF3IP3Q9Y228 551 aa11.11□□□□□ -0.63
CD28-202ENST00000374481 V9GY48 417 aaPredicted RBP11.11□□□□□ -0.63
CD28-202ENST00000374481 MCF2LO15068 1137 aa11.11□□□□□ -0.63
CD28-202ENST00000374481 DR1Q01658 176 aa11.11□□□□□ -0.63
CD28-202ENST00000374481 KRT26Q7Z3Y9 468 aa11.11□□□□□ -0.63
CD28-202ENST00000374481 CATSPER2Q96P56 530 aa11.11□□□□□ -0.63
CD28-202ENST00000374481 PFDN4Q9NQP4 134 aa11.11□□□□□ -0.63
CD28-202ENST00000374481 ANLNQ9NQW6 1124 aa11.11□□□□□ -0.63
CD28-202ENST00000374481 FGFR1OP2Q9NVK5 253 aa11.11□□□□□ -0.63
CD28-202ENST00000374481 GRID2IPA4D2P6 1211 aa11.11□□□□□ -0.63
CD28-202ENST00000374481 DAPK3O43293 454 aa11.11□□□□□ -0.63
CD28-202ENST00000374481 KBTBD12Q3ZCT8 623 aa11.11□□□□□ -0.63
CD28-202ENST00000374481 ZCWPW2Q504Y3 356 aa11.11□□□□□ -0.63
CD28-202ENST00000374481 RASSF3Q86WH2 238 aa11.11□□□□□ -0.63
CD28-202ENST00000374481 CASP10Q92851 521 aa11.11□□□□□ -0.63
CD28-202ENST00000374481 GRAMD1AQ96CP6 724 aa11.11□□□□□ -0.63
CD28-202ENST00000374481 PAGE5Q96GU1 130 aa11.11□□□□□ -0.63
CD28-202ENST00000374481 DRC3Q9H069 523 aa11.11□□□□□ -0.63
CD28-202ENST00000374481 CCDC68Q9H2F9 335 aa11.11□□□□□ -0.63
CD28-202ENST00000374481 SNX24Q9Y343 169 aa11.11□□□□□ -0.63
CD28-202ENST00000374481 NDC80O14777 642 aa11.1□□□□□ -0.63
CD28-202ENST00000374481 PMS2P54278 862 aa11.1□□□□□ -0.63
CD28-202ENST00000374481 TPD52P55327 224 aaPredicted RBP11.1□□□□□ -0.63
CD28-202ENST00000374481 AP2B1P63010 937 aa11.1□□□□□ -0.63
CD28-202ENST00000374481 PDE4BQ07343 736 aa11.1□□□□□ -0.63
CD28-202ENST00000374481 IFIT5Q13325 482 aaKnown RBP11.1□□□□□ -0.63
CD28-202ENST00000374481 TRPC3Q13507 836 aa11.1□□□□□ -0.63
CD28-202ENST00000374481 EZH2Q15910 746 aaKnown RBP11.1□□□□□ -0.63
CD28-202ENST00000374481 KRT79Q5XKE5 535 aa11.1□□□□□ -0.63
CD28-202ENST00000374481 MIS18BP1Q6P0N0 1132 aa11.1□□□□□ -0.63
CD28-202ENST00000374481 ERP27Q96DN0 273 aa11.1□□□□□ -0.63
CD28-202ENST00000374481 MS4A14Q96JA4 679 aa11.1□□□□□ -0.63
CD28-202ENST00000374481 ACSL3O95573 720 aa11.1□□□□□ -0.63
CD28-202ENST00000374481 FESP07332 822 aa11.1□□□□□ -0.63
CD28-202ENST00000374481 BRAFP15056 766 aa11.1□□□□□ -0.63
CD28-202ENST00000374481 KLC3Q6P597 504 aa11.1□□□□□ -0.63
CD28-202ENST00000374481 SREK1Q8WXA9 508 aaKnown RBP11.1□□□□□ -0.63
CD28-202ENST00000374481 TEKT1Q969V4 418 aa11.1□□□□□ -0.63
CD28-202ENST00000374481 FAM161BQ96MY7 647 aa11.1□□□□□ -0.63
CD28-202ENST00000374481 NR1H4Q96RI1 486 aaPredicted RBP11.1□□□□□ -0.63
CD28-202ENST00000374481 KDM1AO60341 852 aa11.1□□□□□ -0.63
CD28-202ENST00000374481 SHOX2O60902 331 aaPredicted RBP11.1□□□□□ -0.63
CD28-202ENST00000374481 EPB41P11171 864 aaKnown RBP11.1□□□□□ -0.63
CD28-202ENST00000374481 CASP1P29466 404 aa11.1□□□□□ -0.63
CD28-202ENST00000374481 GJA8P48165 433 aa11.1□□□□□ -0.63
CD28-202ENST00000374481 WLSQ5T9L3 541 aa11.1□□□□□ -0.63
CD28-202ENST00000374481 FAXDC2Q96IV6 333 aa11.1□□□□□ -0.63
CD28-202ENST00000374481 RPS6KC1Q96S38 1066 aa11.1□□□□□ -0.63
CD28-202ENST00000374481 ALDH8A1Q9H2A2 487 aaPredicted RBP11.1□□□□□ -0.63
CD28-202ENST00000374481 NLRP2Q9NX02 1062 aa11.1□□□□□ -0.63
CD28-202ENST00000374481 IQSEC3Q9UPP2 1182 aaPredicted RBP11.1□□□□□ -0.63
CD28-202ENST00000374481 RIMBP3CA6NJZ7 1639 aa11.1□□□□□ -0.63
CD28-202ENST00000374481 RIMBP3BA6NNM3 1639 aa11.1□□□□□ -0.63
CD28-202ENST00000374481 RIMBP3Q9UFD9 1639 aa11.1□□□□□ -0.63
CD28-202ENST00000374481 CCDC189A1A4V9 331 aa11.1□□□□□ -0.63
CD28-202ENST00000374481 POC1B-GALNT4F8VUJ3 575 aa11.1□□□□□ -0.63
CD28-202ENST00000374481 LIN7AO14910 233 aaPredicted RBP11.1□□□□□ -0.63
CD28-202ENST00000374481 GPAA1O43292 621 aa11.1□□□□□ -0.63
CD28-202ENST00000374481 E2F6O75461 281 aa11.1□□□□□ -0.63
CD28-202ENST00000374481 ATF3P18847 181 aa11.1□□□□□ -0.63
CD28-202ENST00000374481 GSTT1P30711 240 aa11.1□□□□□ -0.63
CD28-202ENST00000374481 ADCY8P40145 1251 aa11.1□□□□□ -0.63
CD28-202ENST00000374481 ALDH5A1P51649 535 aaPredicted RBP11.1□□□□□ -0.63
CD28-202ENST00000374481 MKRN3Q13064 507 aaKnown RBP11.1□□□□□ -0.63
CD28-202ENST00000374481 PAPD7Q5XG87 772 aaKnown RBP11.1□□□□□ -0.63
CD28-202ENST00000374481 ANKRD13DQ6ZTN6 518 aa11.1□□□□□ -0.63
CD28-202ENST00000374481 WDR60Q8WVS4 1066 aa11.1□□□□□ -0.63
CD28-202ENST00000374481 TMBIM4Q9HC24 238 aa11.1□□□□□ -0.63
CD28-202ENST00000374481 TYW1Q9NV66 732 aaKnown RBP11.1□□□□□ -0.63
CD28-202ENST00000374481 ITGB1BP2Q9UKP3 347 aa11.1□□□□□ -0.63
CD28-202ENST00000374481 PTPN22Q9Y2R2 807 aa11.1□□□□□ -0.63
CD28-202ENST00000374481 UHRF1BP1LA0JNW5 1464 aa11.09□□□□□ -0.63
CD28-202ENST00000374481 RTL9Q8NET4 1388 aa11.09□□□□□ -0.63
CD28-202ENST00000374481 EME2A4GXA9 379 aaPredicted RBP11.09□□□□□ -0.63
CD28-202ENST00000374481 HAUS5O94927 633 aa11.09□□□□□ -0.63
CD28-202ENST00000374481 ZWINTO95229 277 aa11.09□□□□□ -0.63
CD28-202ENST00000374481 MARK3P27448 753 aa11.09□□□□□ -0.63
CD28-202ENST00000374481 TMED2Q15363 201 aa11.09□□□□□ -0.63
CD28-202ENST00000374481 RFX8Q6ZV50 586 aa11.09□□□□□ -0.63
CD28-202ENST00000374481 AENQ8WTP8 325 aaKnown RBP11.09□□□□□ -0.63
CD28-202ENST00000374481 DNAJC17Q9NVM6 304 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms