RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 TMEM92Q6UXU6 159 aa9.71□□□□□ -0.86
SNRNP40-202ENST00000373720 TMEM139Q8IV31 216 aa9.71□□□□□ -0.86
SNRNP40-202ENST00000373720 GRAMD1CQ8IYS0 662 aa9.71□□□□□ -0.86
SNRNP40-202ENST00000373720 MB21D1Q8N884 522 aa9.71□□□□□ -0.86
SNRNP40-202ENST00000373720 SLC17A8Q8NDX2 589 aa9.71□□□□□ -0.86
SNRNP40-202ENST00000373720 RASGRP4Q8TDF6 673 aa9.71□□□□□ -0.86
SNRNP40-202ENST00000373720 COA7Q96BR5 231 aa9.71□□□□□ -0.86
SNRNP40-202ENST00000373720 ZBED3Q96IU2 234 aaPredicted RBP9.71□□□□□ -0.86
SNRNP40-202ENST00000373720 PRMT6Q96LA8 375 aaPredicted RBP9.71□□□□□ -0.86
SNRNP40-202ENST00000373720 MED15Q96RN5 788 aa9.71□□□□□ -0.86
SNRNP40-202ENST00000373720 MMTAG2Q9BU76 263 aaKnown RBP9.71□□□□□ -0.86
SNRNP40-202ENST00000373720 TIPINQ9BVW5 301 aa9.71□□□□□ -0.86
SNRNP40-202ENST00000373720 TDRD3Q9H7E2 651 aaKnown RBP9.71□□□□□ -0.86
SNRNP40-202ENST00000373720 VCPKMTQ9H867 229 aa9.71□□□□□ -0.86
SNRNP40-202ENST00000373720 TUFT1Q9NNX1 390 aa9.71□□□□□ -0.86
SNRNP40-202ENST00000373720 DNAI1Q9UI46 699 aa9.71□□□□□ -0.86
SNRNP40-202ENST00000373720 DNM3Q9UQ16 869 aa9.71□□□□□ -0.86
SNRNP40-202ENST00000373720 CTNND2Q9UQB3 1225 aa9.71□□□□□ -0.86
SNRNP40-202ENST00000373720 PPP2R2CQ9Y2T4 447 aa9.71□□□□□ -0.86
SNRNP40-202ENST00000373720 CD2APQ9Y5K6 639 aa9.71□□□□□ -0.86
SNRNP40-202ENST00000373720 ZNF646O15015 1829 aaPredicted RBP9.7□□□□□ -0.86
SNRNP40-202ENST00000373720 MYH4Q9Y623 1939 aa9.7□□□□□ -0.86
SNRNP40-202ENST00000373720 FRMD3A2A2Y4 597 aa9.7□□□□□ -0.86
SNRNP40-202ENST00000373720 GCOM1H8Y6P7 765 aaPredicted RBP9.7□□□□□ -0.86
SNRNP40-202ENST00000373720 RIOK3O14730 519 aaKnown RBP9.7□□□□□ -0.86
SNRNP40-202ENST00000373720 MEIS2O14770 477 aa9.7□□□□□ -0.86
SNRNP40-202ENST00000373720 MAFGO15525 162 aa9.7□□□□□ -0.86
SNRNP40-202ENST00000373720 C21orf2O43822 256 aa9.7□□□□□ -0.86
SNRNP40-202ENST00000373720 KIF5CO60282 957 aa9.7□□□□□ -0.86
SNRNP40-202ENST00000373720 CTNND1O60716 968 aaKnown RBP9.7□□□□□ -0.86
SNRNP40-202ENST00000373720 GH2P01242 217 aa9.7□□□□□ -0.86
SNRNP40-202ENST00000373720 POLR2MP0CAP2 368 aa9.7□□□□□ -0.86
SNRNP40-202ENST00000373720 ANXA13P27216 316 aa9.7□□□□□ -0.86
SNRNP40-202ENST00000373720 HNRNPH3P31942 346 aaKnown RBP9.7□□□□□ -0.86
SNRNP40-202ENST00000373720 CAP2P40123 477 aa9.7□□□□□ -0.86
SNRNP40-202ENST00000373720 SNRPFP62306 86 aaKnown RBP9.7□□□□□ -0.86
SNRNP40-202ENST00000373720 ZBED6P86452 979 aa9.7□□□□□ -0.86
SNRNP40-202ENST00000373720 UBXN1Q04323 297 aa9.7□□□□□ -0.86
SNRNP40-202ENST00000373720 NFIL3Q16649 462 aa9.7□□□□□ -0.86
SNRNP40-202ENST00000373720 SLC4A8Q2Y0W8 1093 aa9.7□□□□□ -0.86
SNRNP40-202ENST00000373720 NOM1Q5C9Z4 860 aaKnown RBP9.7□□□□□ -0.86
SNRNP40-202ENST00000373720 DALRD3Q5D0E6 543 aaKnown RBP9.7□□□□□ -0.86
SNRNP40-202ENST00000373720 DCAF15Q66K64 600 aa9.7□□□□□ -0.86
SNRNP40-202ENST00000373720 CIAPIN1Q6FI81 312 aa9.7□□□□□ -0.86
SNRNP40-202ENST00000373720 KLHL10Q6JEL2 608 aa9.7□□□□□ -0.86
SNRNP40-202ENST00000373720 SH3BP5LQ7L8J4 393 aa9.7□□□□□ -0.86
SNRNP40-202ENST00000373720 SIAH1Q8IUQ4 282 aa9.7□□□□□ -0.86
SNRNP40-202ENST00000373720 MYOCDQ8IZQ8 938 aa9.7□□□□□ -0.86
SNRNP40-202ENST00000373720 ZNF507Q8TCN5 953 aa9.7□□□□□ -0.86
SNRNP40-202ENST00000373720 TMEM174Q8WUU8 243 aa9.7□□□□□ -0.86
SNRNP40-202ENST00000373720 SYN2Q92777 582 aaPredicted RBP9.7□□□□□ -0.86
SNRNP40-202ENST00000373720 RPGRIP1Q96KN7 1286 aa9.7□□□□□ -0.86
SNRNP40-202ENST00000373720 RIT2Q99578 217 aa9.7□□□□□ -0.86
SNRNP40-202ENST00000373720 DNAJC7Q99615 494 aa9.7□□□□□ -0.86
SNRNP40-202ENST00000373720 TUBGCP2Q9BSJ2 902 aa9.7□□□□□ -0.86
SNRNP40-202ENST00000373720 TSGA10Q9BZW7 698 aa9.7□□□□□ -0.86
SNRNP40-202ENST00000373720 BLZF1Q9H2G9 400 aa9.7□□□□□ -0.86
SNRNP40-202ENST00000373720 RANBP17Q9H2T7 1088 aaKnown RBP9.7□□□□□ -0.86
SNRNP40-202ENST00000373720 HAUS4Q9H6D7 363 aa9.7□□□□□ -0.86
SNRNP40-202ENST00000373720 ABHD10Q9NUJ1 306 aa9.7□□□□□ -0.86
SNRNP40-202ENST00000373720 INTS13Q9NVM9 706 aa9.7□□□□□ -0.86
SNRNP40-202ENST00000373720 ZBTB21Q9ULJ3 1066 aa9.7□□□□□ -0.86
SNRNP40-202ENST00000373720 PPP2R3BQ9Y5P8 575 aa9.7□□□□□ -0.86
SNRNP40-202ENST00000373720 UBE4BO95155 1302 aa9.7□□□□□ -0.86
SNRNP40-202ENST00000373720 EFCAB8A8MWE9 144 aa9.69□□□□□ -0.86
SNRNP40-202ENST00000373720 TMEM232C9JQI7 657 aa9.69□□□□□ -0.86
SNRNP40-202ENST00000373720 WDR46O15213 610 aaKnown RBP9.69□□□□□ -0.86
SNRNP40-202ENST00000373720 ATP8B1O43520 1251 aa9.69□□□□□ -0.86
SNRNP40-202ENST00000373720 RPL13P26373 211 aaKnown RBP9.69□□□□□ -0.86
SNRNP40-202ENST00000373720 CHRNA5P30532 468 aa9.69□□□□□ -0.86
SNRNP40-202ENST00000373720 CCT6AP40227 531 aaKnown RBP9.69□□□□□ -0.86
SNRNP40-202ENST00000373720 FAM193AP78312 1265 aa9.69□□□□□ -0.86
SNRNP40-202ENST00000373720 EN1Q05925 392 aaPredicted RBP9.69□□□□□ -0.86
SNRNP40-202ENST00000373720 TCP10Q12799 353 aa9.69□□□□□ -0.86
SNRNP40-202ENST00000373720 IKQ13123 557 aaPredicted RBP9.69□□□□□ -0.86
SNRNP40-202ENST00000373720 ALCAMQ13740 583 aa9.69□□□□□ -0.86
SNRNP40-202ENST00000373720 MYBPC2Q14324 1141 aa9.69□□□□□ -0.86
SNRNP40-202ENST00000373720 MAN2A1Q16706 1144 aa9.69□□□□□ -0.86
SNRNP40-202ENST00000373720 GPR153Q6NV75 609 aa9.69□□□□□ -0.86
SNRNP40-202ENST00000373720 KCTD1Q719H9 257 aa9.69□□□□□ -0.86
SNRNP40-202ENST00000373720 SYT2Q8N9I0 419 aaPredicted RBP9.69□□□□□ -0.86
SNRNP40-202ENST00000373720 PRPF38AQ8NAV1 312 aaKnown RBP9.69□□□□□ -0.86
SNRNP40-202ENST00000373720 GOLGA5Q8TBA6 731 aa9.69□□□□□ -0.86
SNRNP40-202ENST00000373720 ETNPPLQ8TBG4 499 aa9.69□□□□□ -0.86
SNRNP40-202ENST00000373720 ANKRD7Q92527 254 aa9.69□□□□□ -0.86
SNRNP40-202ENST00000373720 HAS1Q92839 578 aa9.69□□□□□ -0.86
SNRNP40-202ENST00000373720 VTI1AQ96AJ9 217 aa9.69□□□□□ -0.86
SNRNP40-202ENST00000373720 NUP88Q99567 741 aaPredicted RBP9.69□□□□□ -0.86
SNRNP40-202ENST00000373720 MTFR1LQ9H019 292 aa9.69□□□□□ -0.86
SNRNP40-202ENST00000373720 METTL14Q9HCE5 456 aaKnown RBP9.69□□□□□ -0.86
SNRNP40-202ENST00000373720 BLOC1S4Q9NUP1 217 aa9.69□□□□□ -0.86
SNRNP40-202ENST00000373720 ARGLU1Q9NWB6 273 aaPredicted RBP9.69□□□□□ -0.86
SNRNP40-202ENST00000373720 PRR12Q9ULL5 1215 aa9.69□□□□□ -0.86
SNRNP40-202ENST00000373720 MYO6Q9UM54 1294 aa9.69□□□□□ -0.86
SNRNP40-202ENST00000373720 MTMR7Q9Y216 660 aa9.69□□□□□ -0.86
SNRNP40-202ENST00000373720 ATP8B3O60423 1300 aa9.68□□□□□ -0.86
SNRNP40-202ENST00000373720 YDJCA8MPS7 323 aa9.68□□□□□ -0.86
SNRNP40-202ENST00000373720 PSMD14O00487 310 aa9.68□□□□□ -0.86
SNRNP40-202ENST00000373720 DKC1O60832 514 aaKnown RBP eCLIP9.68□□□□□ -0.86
SNRNP40-202ENST00000373720 PPP1R11O60927 126 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms