RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 CDHR1Q96JP9 859 aa13.75□□□□□ -0.21
HDAC8-201ENST00000373554 PGBD1Q96JS3 809 aa13.75□□□□□ -0.21
HDAC8-201ENST00000373554 SEZ6LQ9BYH1 1024 aa13.75□□□□□ -0.21
HDAC8-201ENST00000373554 ANO3Q9BYT9 981 aa13.75□□□□□ -0.21
HDAC8-201ENST00000373554 PRDM5Q9NQX1 630 aaPredicted RBP13.75□□□□□ -0.21
HDAC8-201ENST00000373554 SH3GLB2Q9NR46 395 aa13.75□□□□□ -0.21
HDAC8-201ENST00000373554 DCDC2CA8MYV0 355 aa13.74□□□□□ -0.21
HDAC8-201ENST00000373554 SPATA31C2B4DYI2 1134 aa13.74□□□□□ -0.21
HDAC8-201ENST00000373554 MMP3P08254 477 aa13.74□□□□□ -0.21
HDAC8-201ENST00000373554 ICAM3P32942 547 aa13.74□□□□□ -0.21
HDAC8-201ENST00000373554 NLRP5P59047 1200 aa13.74□□□□□ -0.21
HDAC8-201ENST00000373554 PURAQ00577 322 aaKnown RBP13.74□□□□□ -0.21
HDAC8-201ENST00000373554 NEDD9Q14511 834 aa13.74□□□□□ -0.21
HDAC8-201ENST00000373554 ME3Q16798 604 aa13.74□□□□□ -0.21
HDAC8-201ENST00000373554 JAKMIP3Q5VZ66 844 aa13.74□□□□□ -0.21
HDAC8-201ENST00000373554 ANKRD33Q7Z3H0 272 aa13.74□□□□□ -0.21
HDAC8-201ENST00000373554 FAM177A1Q8N128 213 aaPredicted RBP13.74□□□□□ -0.21
HDAC8-201ENST00000373554 PPTC7Q8NI37 304 aa13.74□□□□□ -0.21
HDAC8-201ENST00000373554 GTF3C6Q969F1 213 aa13.74□□□□□ -0.21
HDAC8-201ENST00000373554 GPRASP2Q96D09 838 aa13.74□□□□□ -0.21
HDAC8-201ENST00000373554 MTG1Q9BT17 334 aaPredicted RBP13.74□□□□□ -0.21
HDAC8-201ENST00000373554 MLXIPQ9HAP2 919 aa13.74□□□□□ -0.21
HDAC8-201ENST00000373554 TMEM260Q9NX78 707 aa13.74□□□□□ -0.21
HDAC8-201ENST00000373554 ARVCFO00192 962 aa13.73□□□□□ -0.21
HDAC8-201ENST00000373554 TLR3O15455 904 aaKnown RBP13.73□□□□□ -0.21
HDAC8-201ENST00000373554 LARGE1O95461 756 aa13.73□□□□□ -0.21
HDAC8-201ENST00000373554 CLTBP09497 229 aa13.73□□□□□ -0.21
HDAC8-201ENST00000373554 XBP1P17861 261 aa13.73□□□□□ -0.21
HDAC8-201ENST00000373554 SREBF1P36956 1147 aa13.73□□□□□ -0.21
HDAC8-201ENST00000373554 PSMC6P62333 389 aa13.73□□□□□ -0.21
HDAC8-201ENST00000373554 MTMR1Q13613 665 aa13.73□□□□□ -0.21
HDAC8-201ENST00000373554 ITGA7Q13683 1181 aa13.73□□□□□ -0.21
HDAC8-201ENST00000373554 DGKDQ16760 1214 aa13.73□□□□□ -0.21
HDAC8-201ENST00000373554 CELF3Q5SZQ8 465 aaKnown RBP13.73□□□□□ -0.21
HDAC8-201ENST00000373554 MYSM1Q5VVJ2 828 aa13.73□□□□□ -0.21
HDAC8-201ENST00000373554 NECAB1Q8N987 351 aa13.73□□□□□ -0.21
HDAC8-201ENST00000373554 GIMAP8Q8ND71 665 aaPredicted RBP13.73□□□□□ -0.21
HDAC8-201ENST00000373554 WASF1Q92558 559 aa13.73□□□□□ -0.21
HDAC8-201ENST00000373554 SPATA33Q96N06 139 aa13.73□□□□□ -0.21
HDAC8-201ENST00000373554 TOX2Q96NM4 488 aa13.73□□□□□ -0.21
HDAC8-201ENST00000373554 KIF2CQ99661 725 aa13.73□□□□□ -0.21
HDAC8-201ENST00000373554 PDLIM7Q9NR12 457 aa13.73□□□□□ -0.21
HDAC8-201ENST00000373554 LIMCH1Q9UPQ0 1083 aa13.73□□□□□ -0.21
HDAC8-201ENST00000373554 UBIAD1Q9Y5Z9 338 aa13.73□□□□□ -0.21
HDAC8-201ENST00000373554 CEP290O15078 2479 aa13.73□□□□□ -0.21
HDAC8-201ENST00000373554 NOP56O00567 594 aaKnown RBP13.72□□□□□ -0.21
HDAC8-201ENST00000373554 SORBS3O60504 671 aa13.72□□□□□ -0.21
HDAC8-201ENST00000373554 ITGB5P18084 799 aa13.72□□□□□ -0.21
HDAC8-201ENST00000373554 CDK7P50613 346 aa13.72□□□□□ -0.21
HDAC8-201ENST00000373554 ARHGAP4P98171 946 aa13.72□□□□□ -0.21
HDAC8-201ENST00000373554 SP2Q02086 613 aa13.72□□□□□ -0.21
HDAC8-201ENST00000373554 SEMA3FQ13275 785 aa13.72□□□□□ -0.21
HDAC8-201ENST00000373554 RABEP1Q15276 862 aa13.72□□□□□ -0.21
HDAC8-201ENST00000373554 METTL7BQ6UX53 244 aa13.72□□□□□ -0.21
HDAC8-201ENST00000373554 CHRDL2Q6WN34 429 aa13.72□□□□□ -0.21
HDAC8-201ENST00000373554 LBHD1Q9BQE6 289 aaPredicted RBP13.72□□□□□ -0.21
HDAC8-201ENST00000373554 SENP7Q9BQF6 1050 aa13.72□□□□□ -0.21
HDAC8-201ENST00000373554 ORC3Q9UBD5 711 aaPredicted RBP13.72□□□□□ -0.21
HDAC8-201ENST00000373554 MAFGO15525 162 aa13.71□□□□□ -0.21
HDAC8-201ENST00000373554 ST18O60284 1047 aa13.71□□□□□ -0.21
HDAC8-201ENST00000373554 ZNF76P36508 570 aa13.71□□□□□ -0.21
HDAC8-201ENST00000373554 CHMP4BP1P59074 171 aa13.71□□□□□ -0.21
HDAC8-201ENST00000373554 HSDL1Q3SXM5 330 aa13.71□□□□□ -0.21
HDAC8-201ENST00000373554 CEP55Q53EZ4 464 aa13.71□□□□□ -0.21
HDAC8-201ENST00000373554 FAM47CQ5HY64 1035 aa13.71□□□□□ -0.21
HDAC8-201ENST00000373554 GALNT17Q6IS24 598 aa13.71□□□□□ -0.21
HDAC8-201ENST00000373554 FAM126BQ8IXS8 530 aa13.71□□□□□ -0.21
HDAC8-201ENST00000373554 SLC43A3Q8NBI5 491 aa13.71□□□□□ -0.21
HDAC8-201ENST00000373554 IL27Q8NEV9 243 aa13.71□□□□□ -0.21
HDAC8-201ENST00000373554 ZSCAN31Q96LW9 406 aaPredicted RBP13.71□□□□□ -0.21
HDAC8-201ENST00000373554 AIFM3Q96NN9 605 aa13.71□□□□□ -0.21
HDAC8-201ENST00000373554 MXRA8Q9BRK3 442 aa13.71□□□□□ -0.21
HDAC8-201ENST00000373554 KATNAL1Q9BW62 490 aa13.71□□□□□ -0.21
HDAC8-201ENST00000373554 JADE2Q9NQC1 790 aa13.71□□□□□ -0.21
HDAC8-201ENST00000373554 TMEM39AQ9NV64 488 aa13.71□□□□□ -0.21
HDAC8-201ENST00000373554 PCDHA4Q9UN74 947 aa13.71□□□□□ -0.21
HDAC8-201ENST00000373554 GRIN2DO15399 1336 aa13.7□□□□□ -0.22
HDAC8-201ENST00000373554 PPFIA4O75335 1185 aa13.7□□□□□ -0.22
HDAC8-201ENST00000373554 CTDNEP1O95476 244 aa13.7□□□□□ -0.22
HDAC8-201ENST00000373554 ZNF286BP0CG31 522 aa13.7□□□□□ -0.22
HDAC8-201ENST00000373554 MAGEA10P43363 369 aaPredicted RBP13.7□□□□□ -0.22
HDAC8-201ENST00000373554 FAAP100Q0VG06 881 aa13.7□□□□□ -0.22
HDAC8-201ENST00000373554 NFRKBQ6P4R8 1299 aa13.7□□□□□ -0.22
HDAC8-201ENST00000373554 CYFIP1Q7L576 1253 aa13.7□□□□□ -0.22
HDAC8-201ENST00000373554 BLIDQ8IZY5 108 aa13.7□□□□□ -0.22
HDAC8-201ENST00000373554 DAGLBQ8NCG7 672 aa13.7□□□□□ -0.22
HDAC8-201ENST00000373554 NSUN7Q8NE18 718 aaKnown RBP13.7□□□□□ -0.22
HDAC8-201ENST00000373554 RASGRP4Q8TDF6 673 aa13.7□□□□□ -0.22
HDAC8-201ENST00000373554 TBC1D32Q96NH3 1257 aa13.7□□□□□ -0.22
HDAC8-201ENST00000373554 SH2B1Q9NRF2 756 aaPredicted RBP13.7□□□□□ -0.22
HDAC8-201ENST00000373554 KCNH7Q9NS40 1196 aa13.7□□□□□ -0.22
HDAC8-201ENST00000373554 PKD2L1Q9P0L9 805 aa13.7□□□□□ -0.22
HDAC8-201ENST00000373554 KIAA0355O15063 1070 aa13.69□□□□□ -0.22
HDAC8-201ENST00000373554 ADAMTS3O15072 1205 aa13.69□□□□□ -0.22
HDAC8-201ENST00000373554 F2P00734 622 aa13.69□□□□□ -0.22
HDAC8-201ENST00000373554 CYP3A4P08684 503 aa13.69□□□□□ -0.22
HDAC8-201ENST00000373554 HOXD8P13378 290 aaPredicted RBP13.69□□□□□ -0.22
HDAC8-201ENST00000373554 RAG1P15918 1043 aa13.69□□□□□ -0.22
HDAC8-201ENST00000373554 KCNA2P16389 499 aa13.69□□□□□ -0.22
HDAC8-201ENST00000373554 MDM2Q00987 491 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms