RNA–Protein interactions for RNA: ENST00000373387.8

GARNL3-202, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GARNL3, Length 3,800 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-202ENST00000373387 FNTAP49354 379 aa8.28□□□□□ -1.08
GARNL3-202ENST00000373387 SLC7A5Q01650 507 aa8.28□□□□□ -1.08
GARNL3-202ENST00000373387 PPP4R3AQ6IN85 833 aa8.28□□□□□ -1.08
GARNL3-202ENST00000373387 TRIM59Q8IWR1 403 aa8.28□□□□□ -1.08
GARNL3-202ENST00000373387 HAS1Q92839 578 aa8.28□□□□□ -1.08
GARNL3-202ENST00000373387 CAPS2Q9BXY5 557 aa8.28□□□□□ -1.08
GARNL3-202ENST00000373387 FAM207AQ9NSI2 230 aaPredicted RBP8.28□□□□□ -1.08
GARNL3-202ENST00000373387 TMEM260Q9NX78 707 aa8.28□□□□□ -1.08
GARNL3-202ENST00000373387 AIPL1Q9NZN9 384 aa8.28□□□□□ -1.08
GARNL3-202ENST00000373387 TSKSQ9UJT2 592 aa8.28□□□□□ -1.08
GARNL3-202ENST00000373387 GPR75-ASB3A0A0A6YYF3 556 aa8.28□□□□□ -1.08
GARNL3-202ENST00000373387 H0YGN5 161 aa8.28□□□□□ -1.08
GARNL3-202ENST00000373387 FAM153BP0C7A2 387 aa8.28□□□□□ -1.08
GARNL3-202ENST00000373387 TSPY3P0CV98 308 aa8.28□□□□□ -1.08
GARNL3-202ENST00000373387 TSPY8P0CW00 308 aa8.28□□□□□ -1.08
GARNL3-202ENST00000373387 GNA11P29992 359 aa8.28□□□□□ -1.08
GARNL3-202ENST00000373387 RHBDL3P58872 404 aa8.28□□□□□ -1.08
GARNL3-202ENST00000373387 DDB1Q16531 1140 aa8.28□□□□□ -1.08
GARNL3-202ENST00000373387 FAM153CQ494X1 144 aa8.28□□□□□ -1.08
GARNL3-202ENST00000373387 SV2BQ7L1I2 683 aa8.28□□□□□ -1.08
GARNL3-202ENST00000373387 ACSBG1Q96GR2 724 aa8.28□□□□□ -1.08
GARNL3-202ENST00000373387 FGFBP2Q9BYJ0 223 aa8.28□□□□□ -1.08
GARNL3-202ENST00000373387 C6orf50Q9HD87 102 aa8.28□□□□□ -1.08
GARNL3-202ENST00000373387 FAM153AQ9UHL3 310 aa8.28□□□□□ -1.08
GARNL3-202ENST00000373387 NARFQ9UHQ1 456 aa8.28□□□□□ -1.08
GARNL3-202ENST00000373387 NFS1Q9Y697 457 aa8.28□□□□□ -1.08
GARNL3-202ENST00000373387 CDK8P49336 464 aa8.27□□□□□ -1.09
GARNL3-202ENST00000373387 NAPAP54920 295 aa8.27□□□□□ -1.09
GARNL3-202ENST00000373387 IPO4Q8TEX9 1081 aaKnown RBP8.27□□□□□ -1.09
GARNL3-202ENST00000373387 FAM163AQ96GL9 167 aaPredicted RBP8.27□□□□□ -1.09
GARNL3-202ENST00000373387 MS4A14Q96JA4 679 aa8.27□□□□□ -1.09
GARNL3-202ENST00000373387 GAKO14976 1311 aa8.27□□□□□ -1.09
GARNL3-202ENST00000373387 KCNQ2O43526 872 aa8.27□□□□□ -1.09
GARNL3-202ENST00000373387 PPP1R11O60927 126 aaPredicted RBP8.27□□□□□ -1.09
GARNL3-202ENST00000373387 SERPING1P05155 500 aa8.27□□□□□ -1.09
GARNL3-202ENST00000373387 CXCR5P32302 372 aa8.27□□□□□ -1.09
GARNL3-202ENST00000373387 SEPT2Q15019 361 aa8.27□□□□□ -1.09
GARNL3-202ENST00000373387 RC3H1Q5TC82 1133 aaKnown RBP8.27□□□□□ -1.09
GARNL3-202ENST00000373387 KCNV1Q6PIU1 500 aa8.27□□□□□ -1.09
GARNL3-202ENST00000373387 RRAGAQ7L523 313 aa8.27□□□□□ -1.09
GARNL3-202ENST00000373387 AMIGO3Q86WK7 504 aa8.27□□□□□ -1.09
GARNL3-202ENST00000373387 WDR66Q8TBY9 1149 aa8.27□□□□□ -1.09
GARNL3-202ENST00000373387 CAGE1Q8TC20 777 aa8.27□□□□□ -1.09
GARNL3-202ENST00000373387 ALS2CR12Q96Q35 445 aa8.27□□□□□ -1.09
GARNL3-202ENST00000373387 PIGSQ96S52 555 aa8.27□□□□□ -1.09
GARNL3-202ENST00000373387 IPO7O95373 1038 aaKnown RBP8.27□□□□□ -1.09
GARNL3-202ENST00000373387 TDP2O95551 362 aa8.27□□□□□ -1.09
GARNL3-202ENST00000373387 PDHBP11177 359 aa8.27□□□□□ -1.09
GARNL3-202ENST00000373387 HSPA9P38646 679 aaKnown RBP8.27□□□□□ -1.09
GARNL3-202ENST00000373387 MAGEA1P43355 309 aa8.27□□□□□ -1.09
GARNL3-202ENST00000373387 CARSP49589 748 aaKnown RBP8.27□□□□□ -1.09
GARNL3-202ENST00000373387 APBA1Q02410 837 aa8.27□□□□□ -1.09
GARNL3-202ENST00000373387 GABPAQ06546 454 aa8.27□□□□□ -1.09
GARNL3-202ENST00000373387 SLC18A3Q16572 532 aa8.27□□□□□ -1.09
GARNL3-202ENST00000373387 TTC31Q49AM3 519 aaPredicted RBP8.27□□□□□ -1.09
GARNL3-202ENST00000373387 ICE2Q659A1 982 aa8.27□□□□□ -1.09
GARNL3-202ENST00000373387 USP17L2Q6R6M4 530 aa8.27□□□□□ -1.09
GARNL3-202ENST00000373387 YTHDF3Q7Z739 585 aaKnown RBP8.27□□□□□ -1.09
GARNL3-202ENST00000373387 LRRC57Q8N9N7 239 aa8.27□□□□□ -1.09
GARNL3-202ENST00000373387 DDX12PQ92771 950 aa8.27□□□□□ -1.09
GARNL3-202ENST00000373387 CCDC47Q96A33 483 aaKnown RBP8.27□□□□□ -1.09
GARNL3-202ENST00000373387 CEP63Q96MT8 703 aa8.27□□□□□ -1.09
GARNL3-202ENST00000373387 NYXQ9GZU5 481 aa8.27□□□□□ -1.09
GARNL3-202ENST00000373387 ATP6V0A2Q9Y487 856 aa8.27□□□□□ -1.09
GARNL3-202ENST00000373387 ANKRD31Q8N7Z5 1873 aa8.27□□□□□ -1.09
GARNL3-202ENST00000373387 LOXHD1Q8IVV2 1947 aa8.26□□□□□ -1.09
GARNL3-202ENST00000373387 ZNFX1Q9P2E3 1918 aaKnown RBP8.26□□□□□ -1.09
GARNL3-202ENST00000373387 ZSCAN5CA6NGD5 496 aaPredicted RBP8.26□□□□□ -1.09
GARNL3-202ENST00000373387 A6NNZ2 444 aa8.26□□□□□ -1.09
GARNL3-202ENST00000373387 ANKRD65E5RJM6 399 aa8.26□□□□□ -1.09
GARNL3-202ENST00000373387 OPA1O60313 960 aa8.26□□□□□ -1.09
GARNL3-202ENST00000373387 COASYQ13057 564 aa8.26□□□□□ -1.09
GARNL3-202ENST00000373387 DIXDC1Q155Q3 683 aa8.26□□□□□ -1.09
GARNL3-202ENST00000373387 CDC37Q16543 378 aaPredicted RBP8.26□□□□□ -1.09
GARNL3-202ENST00000373387 TUBB8Q3ZCM7 444 aa8.26□□□□□ -1.09
GARNL3-202ENST00000373387 REXO1Q8N1G1 1221 aaKnown RBP8.26□□□□□ -1.09
GARNL3-202ENST00000373387 SCFD2Q8WU76 684 aa8.26□□□□□ -1.09
GARNL3-202ENST00000373387 CASKIN2Q8WXE0 1202 aa8.26□□□□□ -1.09
GARNL3-202ENST00000373387 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.26□□□□□ -1.09
GARNL3-202ENST00000373387 SEC14L1Q92503 715 aa8.26□□□□□ -1.09
GARNL3-202ENST00000373387 CALML4Q96GE6 196 aa8.26□□□□□ -1.09
GARNL3-202ENST00000373387 ZFP91Q96JP5 570 aaPredicted RBP8.26□□□□□ -1.09
GARNL3-202ENST00000373387 NUCKS1Q9H1E3 243 aaKnown RBP8.26□□□□□ -1.09
GARNL3-202ENST00000373387 ATF5Q9Y2D1 282 aaPredicted RBP8.26□□□□□ -1.09
GARNL3-202ENST00000373387 FAM169AQ9Y6X4 670 aa8.26□□□□□ -1.09
GARNL3-202ENST00000373387 RGPD3A6NKT7 1758 aaPredicted RBP8.26□□□□□ -1.09
GARNL3-202ENST00000373387 RGPD4Q7Z3J3 1758 aa8.26□□□□□ -1.09
GARNL3-202ENST00000373387 POTEMA6NI47 508 aa8.26□□□□□ -1.09
GARNL3-202ENST00000373387 SLC26A4O43511 780 aa8.26□□□□□ -1.09
GARNL3-202ENST00000373387 LDHBP07195 334 aaKnown RBP8.26□□□□□ -1.09
GARNL3-202ENST00000373387 KLRC1P26715 233 aa8.26□□□□□ -1.09
GARNL3-202ENST00000373387 CCT5P48643 541 aa8.26□□□□□ -1.09
GARNL3-202ENST00000373387 RASSF7Q02833 373 aa8.26□□□□□ -1.09
GARNL3-202ENST00000373387 FAM83BQ5T0W9 1011 aa8.26□□□□□ -1.09
GARNL3-202ENST00000373387 SWT1Q5T5J6 900 aaKnown RBP8.26□□□□□ -1.09
GARNL3-202ENST00000373387 PPP1R18Q6NYC8 613 aa8.26□□□□□ -1.09
GARNL3-202ENST00000373387 DZIP1Q86YF9 867 aaKnown RBP8.26□□□□□ -1.09
GARNL3-202ENST00000373387 CNPY4Q8N129 248 aa8.26□□□□□ -1.09
GARNL3-202ENST00000373387 TGFBRAP1Q8WUH2 860 aa8.26□□□□□ -1.09
GARNL3-202ENST00000373387 CRYGNQ8WXF5 182 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms