RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 TRAPPC11Q7Z392 1133 aa26.46■■□□□ 1.83
CDK9-201ENST00000373264 CTAGE6Q86UF2 777 aa26.46■■□□□ 1.83
CDK9-201ENST00000373264 CTAGE4Q8IX94 777 aa26.46■■□□□ 1.83
CDK9-201ENST00000373264 MMS19Q96T76 1030 aa26.46■■□□□ 1.83
CDK9-201ENST00000373264 POTEFA5A3E0 1075 aa26.46■■□□□ 1.83
CDK9-201ENST00000373264 PSMD14O00487 310 aa26.46■■□□□ 1.83
CDK9-201ENST00000373264 APBA3O96018 575 aa26.46■■□□□ 1.83
CDK9-201ENST00000373264 POTEIP0CG38 1075 aa26.46■■□□□ 1.83
CDK9-201ENST00000373264 POTEGQ6S5H5 508 aa26.46■■□□□ 1.83
CDK9-201ENST00000373264 POTEEQ6S8J3 1075 aa26.46■■□□□ 1.83
CDK9-201ENST00000373264 PODNQ7Z5L7 613 aa26.46■■□□□ 1.83
CDK9-201ENST00000373264 MEIS1O00470 390 aa26.45■■□□□ 1.83
CDK9-201ENST00000373264 ICA1Q05084 483 aa26.45■■□□□ 1.83
CDK9-201ENST00000373264 SPICE1Q8N0Z3 855 aa26.45■■□□□ 1.83
CDK9-201ENST00000373264 RETREG2Q8NC44 543 aa26.45■■□□□ 1.83
CDK9-201ENST00000373264 BCAS3Q9H6U6 928 aa26.45■■□□□ 1.83
CDK9-201ENST00000373264 PSMC6P62333 389 aa26.45■■□□□ 1.82
CDK9-201ENST00000373264 MAN2A1Q16706 1144 aa26.45■■□□□ 1.82
CDK9-201ENST00000373264 AOC3Q16853 763 aa26.45■■□□□ 1.82
CDK9-201ENST00000373264 CCDC17Q96LX7 622 aa26.45■■□□□ 1.82
CDK9-201ENST00000373264 TMX4Q9H1E5 349 aaPredicted RBP26.45■■□□□ 1.82
CDK9-201ENST00000373264 ABCB6Q9NP58 842 aa26.45■■□□□ 1.82
CDK9-201ENST00000373264 PI4KBQ9UBF8 816 aa26.45■■□□□ 1.82
CDK9-201ENST00000373264 LRRC53A6NM62 1247 aa26.44■■□□□ 1.82
CDK9-201ENST00000373264 F5H6K3 240 aa26.44■■□□□ 1.82
CDK9-201ENST00000373264 CYLC1P35663 651 aaPredicted RBP26.44■■□□□ 1.82
CDK9-201ENST00000373264 PPP1R2P41236 205 aa26.44■■□□□ 1.82
CDK9-201ENST00000373264 GYS2P54840 703 aa26.44■■□□□ 1.82
CDK9-201ENST00000373264 KLRC3Q07444 240 aa26.44■■□□□ 1.82
CDK9-201ENST00000373264 WHAMMP3Q1A5X7 153 aa26.44■■□□□ 1.82
CDK9-201ENST00000373264 PRR16Q569H4 304 aa26.44■■□□□ 1.82
CDK9-201ENST00000373264 RRAGAQ7L523 313 aa26.44■■□□□ 1.82
CDK9-201ENST00000373264 MYOCDQ8IZQ8 938 aa26.44■■□□□ 1.82
CDK9-201ENST00000373264 TANGO6Q9C0B7 1094 aa26.44■■□□□ 1.82
CDK9-201ENST00000373264 SLX4Q8IY92 1834 aa26.44■■□□□ 1.82
CDK9-201ENST00000373264 EIF3CLB5ME19 914 aaKnown RBP26.44■■□□□ 1.82
CDK9-201ENST00000373264 PLA2G4BP0C869 781 aa26.44■■□□□ 1.82
CDK9-201ENST00000373264 HOXA13P31271 388 aaPredicted RBP26.44■■□□□ 1.82
CDK9-201ENST00000373264 KRT83P78385 493 aa26.44■■□□□ 1.82
CDK9-201ENST00000373264 MSANTD4Q8NCY6 345 aa26.44■■□□□ 1.82
CDK9-201ENST00000373264 EIF3CQ99613 913 aaKnown RBP26.44■■□□□ 1.82
CDK9-201ENST00000373264 ZHX3Q9H4I2 956 aa26.44■■□□□ 1.82
CDK9-201ENST00000373264 KCNMB3Q9NPA1 279 aa26.44■■□□□ 1.82
CDK9-201ENST00000373264 CCDC151A5D8V7 595 aa26.43■■□□□ 1.82
CDK9-201ENST00000373264 TRAF5O00463 557 aa26.43■■□□□ 1.82
CDK9-201ENST00000373264 KCNMA1Q12791 1236 aa26.43■■□□□ 1.82
CDK9-201ENST00000373264 IKQ13123 557 aaPredicted RBP26.43■■□□□ 1.82
CDK9-201ENST00000373264 FAM26FQ5R3K3 315 aa26.43■■□□□ 1.82
CDK9-201ENST00000373264 GPBP1Q86WP2 473 aa26.43■■□□□ 1.82
CDK9-201ENST00000373264 CYP2W1Q8TAV3 490 aa26.43■■□□□ 1.82
CDK9-201ENST00000373264 CCDC42Q96M95 316 aa26.43■■□□□ 1.82
CDK9-201ENST00000373264 UBXN6Q9BZV1 441 aa26.43■■□□□ 1.82
CDK9-201ENST00000373264 MLXIPQ9HAP2 919 aa26.43■■□□□ 1.82
CDK9-201ENST00000373264 OAS2P29728 719 aaKnown RBP26.43■■□□□ 1.82
CDK9-201ENST00000373264 EIF4A3P38919 411 aaKnown RBP26.43■■□□□ 1.82
CDK9-201ENST00000373264 ZCWPW2Q504Y3 356 aa26.43■■□□□ 1.82
CDK9-201ENST00000373264 BEND6Q5SZJ8 279 aaPredicted RBP26.43■■□□□ 1.82
CDK9-201ENST00000373264 MKL1Q969V6 931 aa26.43■■□□□ 1.82
CDK9-201ENST00000373264 DRC1Q96MC2 740 aa26.43■■□□□ 1.82
CDK9-201ENST00000373264 CRACR2AQ9BSW2 395 aa26.43■■□□□ 1.82
CDK9-201ENST00000373264 PLAGL2Q9UPG8 496 aa26.43■■□□□ 1.82
CDK9-201ENST00000373264 A0A1W2PQJ5 194 aa26.42■■□□□ 1.82
CDK9-201ENST00000373264 NDUFB10O96000 172 aa26.42■■□□□ 1.82
CDK9-201ENST00000373264 LRRC63Q05C16 580 aa26.42■■□□□ 1.82
CDK9-201ENST00000373264 SMC1AQ14683 1233 aaKnown RBP26.42■■□□□ 1.82
CDK9-201ENST00000373264 ARSHQ5FYA8 562 aa26.42■■□□□ 1.82
CDK9-201ENST00000373264 HINFPQ9BQA5 517 aa26.42■■□□□ 1.82
CDK9-201ENST00000373264 PCDHA2Q9Y5H9 948 aa26.42■■□□□ 1.82
CDK9-201ENST00000373264 FIGNQ5HY92 759 aa26.42■■□□□ 1.82
CDK9-201ENST00000373264 TRIM34Q9BYJ4 488 aa26.42■■□□□ 1.82
CDK9-201ENST00000373264 NLRC4Q9NPP4 1024 aa26.42■■□□□ 1.82
CDK9-201ENST00000373264 NYAP2Q9P242 653 aa26.42■■□□□ 1.82
CDK9-201ENST00000373264 CAPN6Q9Y6Q1 641 aa26.42■■□□□ 1.82
CDK9-201ENST00000373264 A0A1W2PRG0 241 aa26.41■■□□□ 1.82
CDK9-201ENST00000373264 FAM86B1E9PN63 330 aa26.41■■□□□ 1.82
CDK9-201ENST00000373264 H3BQF6 201 aa26.41■■□□□ 1.82
CDK9-201ENST00000373264 KRT86O43790 486 aa26.41■■□□□ 1.82
CDK9-201ENST00000373264 GH2P01242 217 aa26.41■■□□□ 1.82
CDK9-201ENST00000373264 FAM86B2P0C5J1 330 aa26.41■■□□□ 1.82
CDK9-201ENST00000373264 CASP5P51878 434 aa26.41■■□□□ 1.82
CDK9-201ENST00000373264 ARHGAP4P98171 946 aa26.41■■□□□ 1.82
CDK9-201ENST00000373264 STRIP1Q5VSL9 837 aa26.41■■□□□ 1.82
CDK9-201ENST00000373264 TATDN1Q6P1N9 297 aa26.41■■□□□ 1.82
CDK9-201ENST00000373264 ANKRD13CQ8N6S4 541 aa26.41■■□□□ 1.82
CDK9-201ENST00000373264 BAP1Q92560 729 aa26.41■■□□□ 1.82
CDK9-201ENST00000373264 RAB21Q9UL25 225 aa26.41■■□□□ 1.82
CDK9-201ENST00000373264 UTRNP46939 3433 aa26.41■■□□□ 1.82
CDK9-201ENST00000373264 PDE2AO00408 941 aaPredicted RBP26.41■■□□□ 1.82
CDK9-201ENST00000373264 GCFC2P16383 781 aaKnown RBP26.41■■□□□ 1.82
CDK9-201ENST00000373264 CYP11B2P19099 503 aa26.41■■□□□ 1.82
CDK9-201ENST00000373264 HERC4Q5GLZ8 1057 aaPredicted RBP26.41■■□□□ 1.82
CDK9-201ENST00000373264 CCDC170Q8IYT3 715 aa26.41■■□□□ 1.82
CDK9-201ENST00000373264 IDI2Q9BXS1 227 aa26.41■■□□□ 1.82
CDK9-201ENST00000373264 SAR1BQ9Y6B6 198 aa26.41■■□□□ 1.82
CDK9-201ENST00000373264 C10orf71Q711Q0 1435 aa26.4■■□□□ 1.82
CDK9-201ENST00000373264 ERICH4A6NGS2 130 aa26.4■■□□□ 1.82
CDK9-201ENST00000373264 BRD3Q15059 726 aa26.4■■□□□ 1.82
CDK9-201ENST00000373264 ABCB5Q2M3G0 1257 aa26.4■■□□□ 1.82
CDK9-201ENST00000373264 DCAF4Q8WV16 495 aa26.4■■□□□ 1.82
CDK9-201ENST00000373264 PRMT6Q96LA8 375 aaPredicted RBP26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms