RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 IKQ13123 557 aaPredicted RBP22.88■■□□□ 1.25
VEGFA-204ENST00000372064 CC2D1AQ6P1N0 951 aaPredicted RBP22.88■■□□□ 1.25
VEGFA-204ENST00000372064 ZMYND15Q9H091 742 aa22.88■■□□□ 1.25
VEGFA-204ENST00000372064 NHEJ1Q9H9Q4 299 aaPredicted RBP22.88■■□□□ 1.25
VEGFA-204ENST00000372064 TRIM10Q9UDY6 481 aa22.88■■□□□ 1.25
VEGFA-204ENST00000372064 COL2A1P02458 1487 aaPredicted RBP22.88■■□□□ 1.25
VEGFA-204ENST00000372064 EIF3CLB5ME19 914 aaKnown RBP22.87■■□□□ 1.25
VEGFA-204ENST00000372064 PPIP5K2O43314 1243 aa22.87■■□□□ 1.25
VEGFA-204ENST00000372064 ENTPD3O75355 529 aa22.87■■□□□ 1.25
VEGFA-204ENST00000372064 SSBP05455 408 aaKnown RBP eCLIP22.87■■□□□ 1.259e-13■■□□□ 11.9
VEGFA-204ENST00000372064 USH1GQ495M9 461 aa22.87■■□□□ 1.25
VEGFA-204ENST00000372064 ZCWPW2Q504Y3 356 aa22.87■■□□□ 1.25
VEGFA-204ENST00000372064 MCTP2Q6DN12 878 aa22.87■■□□□ 1.25
VEGFA-204ENST00000372064 PCMTD1Q96MG8 357 aaPredicted RBP22.87■■□□□ 1.25
VEGFA-204ENST00000372064 EIF3CQ99613 913 aaKnown RBP22.87■■□□□ 1.25
VEGFA-204ENST00000372064 AMNQ9BXJ7 453 aa22.87■■□□□ 1.25
VEGFA-204ENST00000372064 CSRNP1Q96S65 589 aa22.87■■□□□ 1.25
VEGFA-204ENST00000372064 E9PMD0 336 aa22.86■■□□□ 1.25
VEGFA-204ENST00000372064 RBM26Q5T8P6 1007 aaKnown RBP22.86■■□□□ 1.25
VEGFA-204ENST00000372064 GUCA1BQ9UMX6 200 aa22.86■■□□□ 1.25
VEGFA-204ENST00000372064 KIAA1024Q9UPX6 916 aa22.86■■□□□ 1.25
VEGFA-204ENST00000372064 C21orf2O43822 256 aa22.86■■□□□ 1.25
VEGFA-204ENST00000372064 MYOCDQ8IZQ8 938 aa22.86■■□□□ 1.25
VEGFA-204ENST00000372064 TSG101Q99816 390 aa22.86■■□□□ 1.25
VEGFA-204ENST00000372064 PUF60Q9UHX1 559 aaKnown RBP22.86■■□□□ 1.25
VEGFA-204ENST00000372064 A0A1W2PRG0 241 aa22.85■■□□□ 1.25
VEGFA-204ENST00000372064 POTEB3A0JP26 581 aa22.85■■□□□ 1.25
VEGFA-204ENST00000372064 POTECB2RU33 542 aa22.85■■□□□ 1.25
VEGFA-204ENST00000372064 STAT3P40763 770 aa22.85■■□□□ 1.25
VEGFA-204ENST00000372064 SYDE2Q5VT97 1194 aa22.85■■□□□ 1.25
VEGFA-204ENST00000372064 CC2D2BQ6DHV5 1058 aa22.85■■□□□ 1.25
VEGFA-204ENST00000372064 POTEBQ6S5H4 581 aa22.85■■□□□ 1.25
VEGFA-204ENST00000372064 FBXO11Q86XK2 927 aa22.85■■□□□ 1.25
VEGFA-204ENST00000372064 SLFN12Q8IYM2 578 aa22.85■■□□□ 1.25
VEGFA-204ENST00000372064 PANK4Q9NVE7 773 aa22.85■■□□□ 1.25
VEGFA-204ENST00000372064 ARHGAP4P98171 946 aa22.85■■□□□ 1.25
VEGFA-204ENST00000372064 PCDHA2Q9Y5H9 948 aa22.85■■□□□ 1.25
VEGFA-204ENST00000372064 SEC31AO94979 1220 aaKnown RBP22.85■■□□□ 1.25
VEGFA-204ENST00000372064 MMP14P50281 582 aa22.85■■□□□ 1.25
VEGFA-204ENST00000372064 SLC15A2Q16348 729 aa22.85■■□□□ 1.25
VEGFA-204ENST00000372064 ANKZF1Q9H8Y5 726 aa22.85■■□□□ 1.25
VEGFA-204ENST00000372064 MYO6Q9UM54 1294 aa22.85■■□□□ 1.25
VEGFA-204ENST00000372064 PLAGL2Q9UPG8 496 aa22.85■■□□□ 1.25
VEGFA-204ENST00000372064 BMP3P12645 472 aa22.84■■□□□ 1.25
VEGFA-204ENST00000372064 CCDC122Q5T0U0 273 aa22.84■■□□□ 1.25
VEGFA-204ENST00000372064 CCDC84Q86UT8 332 aaPredicted RBP22.84■■□□□ 1.25
VEGFA-204ENST00000372064 SPICE1Q8N0Z3 855 aa22.84■■□□□ 1.25
VEGFA-204ENST00000372064 MSANTD4Q8NCY6 345 aa22.84■■□□□ 1.25
VEGFA-204ENST00000372064 ETNPPLQ8TBG4 499 aa22.84■■□□□ 1.25
VEGFA-204ENST00000372064 ZSWIM4Q9H7M6 989 aa22.84■■□□□ 1.25
VEGFA-204ENST00000372064 BMP2KQ9NSY1 1161 aaPredicted RBP22.84■■□□□ 1.25
VEGFA-204ENST00000372064 PLA2G4BP0C869 781 aa22.84■■□□□ 1.25
VEGFA-204ENST00000372064 PLA2G4AP47712 749 aa22.84■■□□□ 1.25
VEGFA-204ENST00000372064 SPIRE1Q08AE8 756 aa22.84■■□□□ 1.25
VEGFA-204ENST00000372064 Q4G0T1 1027 aa22.84■■□□□ 1.25
VEGFA-204ENST00000372064 FAM26FQ5R3K3 315 aa22.84■■□□□ 1.25
VEGFA-204ENST00000372064 TRAPPC11Q7Z392 1133 aa22.84■■□□□ 1.25
VEGFA-204ENST00000372064 EHBP1Q8NDI1 1231 aa22.84■■□□□ 1.25
VEGFA-204ENST00000372064 POTEB2H3BUK9 544 aa22.83■■□□□ 1.25
VEGFA-204ENST00000372064 TBC1D8O95759 1140 aa22.83■■□□□ 1.25
VEGFA-204ENST00000372064 PRR16Q569H4 304 aa22.83■■□□□ 1.25
VEGFA-204ENST00000372064 JAKMIP2Q96AA8 810 aa22.83■■□□□ 1.25
VEGFA-204ENST00000372064 CCDC151A5D8V7 595 aa22.83■■□□□ 1.24
VEGFA-204ENST00000372064 TCP10L2B9ZVM9 353 aa22.83■■□□□ 1.24
VEGFA-204ENST00000372064 TBX3O15119 743 aa22.83■■□□□ 1.24
VEGFA-204ENST00000372064 ERCC3P19447 782 aa22.83■■□□□ 1.24
VEGFA-204ENST00000372064 BRD3Q15059 726 aa22.83■■□□□ 1.24
VEGFA-204ENST00000372064 BTNL9Q6UXG8 535 aa22.83■■□□□ 1.24
VEGFA-204ENST00000372064 PURBQ96QR8 312 aaKnown RBP22.83■■□□□ 1.24
VEGFA-204ENST00000372064 FGFBP2Q9BYJ0 223 aa22.83■■□□□ 1.24
VEGFA-204ENST00000372064 SYNPO2Q9UMS6 1093 aa22.83■■□□□ 1.24
VEGFA-204ENST00000372064 TFR2Q9UP52 801 aa22.83■■□□□ 1.24
VEGFA-204ENST00000372064 EPHB6O15197 1021 aa22.82■■□□□ 1.24
VEGFA-204ENST00000372064 KRT86O43790 486 aa22.82■■□□□ 1.24
VEGFA-204ENST00000372064 MED24O75448 989 aa22.82■■□□□ 1.24
VEGFA-204ENST00000372064 RXRBP28702 533 aa22.82■■□□□ 1.24
VEGFA-204ENST00000372064 CACNB1Q02641 598 aaPredicted RBP22.82■■□□□ 1.24
VEGFA-204ENST00000372064 KIAA1328Q86T90 577 aa22.82■■□□□ 1.24
VEGFA-204ENST00000372064 SUPT20HQ8NEM7 779 aa22.82■■□□□ 1.24
VEGFA-204ENST00000372064 TBC1D7Q9P0N9 293 aa22.82■■□□□ 1.24
VEGFA-204ENST00000372064 RAB21Q9UL25 225 aa22.82■■□□□ 1.24
VEGFA-204ENST00000372064 NPHP3-ACAD11A0A0J9YXS1 232 aa22.82■■□□□ 1.24
VEGFA-204ENST00000372064 CLRN2A0PK11 232 aa22.82■■□□□ 1.24
VEGFA-204ENST00000372064 FRMD3A2A2Y4 597 aa22.82■■□□□ 1.24
VEGFA-204ENST00000372064 FKBP3Q00688 224 aaKnown RBP22.82■■□□□ 1.24
VEGFA-204ENST00000372064 EZH2Q15910 746 aaKnown RBP22.82■■□□□ 1.24
VEGFA-204ENST00000372064 CCDC65Q8IXS2 484 aa22.82■■□□□ 1.24
VEGFA-204ENST00000372064 ARFGAP3Q9NP61 516 aa22.82■■□□□ 1.24
VEGFA-204ENST00000372064 RCCD1A6NED2 376 aa22.81■■□□□ 1.24
VEGFA-204ENST00000372064 TFRCP02786 760 aaKnown RBP22.81■■□□□ 1.24
VEGFA-204ENST00000372064 CYP11B2P19099 503 aa22.81■■□□□ 1.24
VEGFA-204ENST00000372064 LENG9Q96B70 501 aa22.81■■□□□ 1.24
VEGFA-204ENST00000372064 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.81■■□□□ 1.243e-7■■■■■ 34.2
VEGFA-204ENST00000372064 RGPD3A6NKT7 1758 aaPredicted RBP22.81■■□□□ 1.24
VEGFA-204ENST00000372064 RGPD4Q7Z3J3 1758 aa22.81■■□□□ 1.24
VEGFA-204ENST00000372064 OPLAHO14841 1288 aa22.81■■□□□ 1.24
VEGFA-204ENST00000372064 SREBF1P36956 1147 aa22.81■■□□□ 1.24
VEGFA-204ENST00000372064 ECE1P42892 770 aa22.81■■□□□ 1.24
VEGFA-204ENST00000372064 SLC12A3P55017 1021 aa22.81■■□□□ 1.24
VEGFA-204ENST00000372064 PAPD7Q5XG87 772 aaKnown RBP22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms