RNA–Protein interactions for RNA: ENST00000372056.8

LDB3-203, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-203ENST00000372056 HHIPL1Q96JK4 782 aa14.55□□□□□ -0.08
LDB3-203ENST00000372056 AGBL1Q96MI9 1066 aa14.55□□□□□ -0.08
LDB3-203ENST00000372056 PLIN2Q99541 437 aa14.55□□□□□ -0.08
LDB3-203ENST00000372056 MPHOSPH6Q99547 160 aaKnown RBP14.55□□□□□ -0.08
LDB3-203ENST00000372056 ACAD9Q9H845 621 aa14.55□□□□□ -0.08
LDB3-203ENST00000372056 RAVER2Q9HCJ3 691 aaKnown RBP14.55□□□□□ -0.08
LDB3-203ENST00000372056 SPTLC3Q9NUV7 552 aa14.55□□□□□ -0.08
LDB3-203ENST00000372056 DDX25Q9UHL0 483 aaKnown RBP14.55□□□□□ -0.08
LDB3-203ENST00000372056 ZNF214Q9UL59 606 aaPredicted RBP14.55□□□□□ -0.08
LDB3-203ENST00000372056 LOC102724159A0A0B4J2E5 919 aa14.55□□□□□ -0.08
LDB3-203ENST00000372056 MARCH6O60337 910 aa14.55□□□□□ -0.08
LDB3-203ENST00000372056 STAM2O75886 525 aa14.55□□□□□ -0.08
LDB3-203ENST00000372056 SERPINC1P01008 464 aa14.55□□□□□ -0.08
LDB3-203ENST00000372056 UBASH3AP57075 661 aa14.55□□□□□ -0.08
LDB3-203ENST00000372056 SETQ01105 290 aaPredicted RBP14.55□□□□□ -0.08
LDB3-203ENST00000372056 PWP2Q15269 919 aaKnown RBP14.55□□□□□ -0.08
LDB3-203ENST00000372056 SNRNP48Q6IEG0 339 aaKnown RBP14.55□□□□□ -0.08
LDB3-203ENST00000372056 SAMD1Q6SPF0 538 aaPredicted RBP14.55□□□□□ -0.08
LDB3-203ENST00000372056 FILIP1Q7Z7B0 1213 aa14.55□□□□□ -0.08
LDB3-203ENST00000372056 LRRC8AQ8IWT6 810 aa14.55□□□□□ -0.08
LDB3-203ENST00000372056 CLEC4DQ8WXI8 215 aa14.55□□□□□ -0.08
LDB3-203ENST00000372056 MYH7BA7E2Y1 1941 aa14.54□□□□□ -0.08
LDB3-203ENST00000372056 SYNRGQ9UMZ2 1314 aa14.54□□□□□ -0.08
LDB3-203ENST00000372056 OPLAHO14841 1288 aa14.54□□□□□ -0.08
LDB3-203ENST00000372056 MAFGO15525 162 aa14.54□□□□□ -0.08
LDB3-203ENST00000372056 ZNF76P36508 570 aa14.54□□□□□ -0.08
LDB3-203ENST00000372056 GSDMDP57764 484 aa14.54□□□□□ -0.08
LDB3-203ENST00000372056 CCNA1P78396 465 aa14.54□□□□□ -0.08
LDB3-203ENST00000372056 SEMA3FQ13275 785 aa14.54□□□□□ -0.08
LDB3-203ENST00000372056 ARID5BQ14865 1188 aa14.54□□□□□ -0.08
LDB3-203ENST00000372056 NOLC1Q14978 699 aaKnown RBP eCLIP14.54□□□□□ -0.08
LDB3-203ENST00000372056 ZNF658Q5TYW1 1059 aaPredicted RBP14.54□□□□□ -0.08
LDB3-203ENST00000372056 SPATA1Q5VX52 437 aa14.54□□□□□ -0.08
LDB3-203ENST00000372056 SPRYD7Q5W111 196 aa14.54□□□□□ -0.08
LDB3-203ENST00000372056 KLHL10Q6JEL2 608 aa14.54□□□□□ -0.08
LDB3-203ENST00000372056 DLK2Q6UY11 383 aa14.54□□□□□ -0.08
LDB3-203ENST00000372056 RNF207Q6ZRF8 634 aa14.54□□□□□ -0.08
LDB3-203ENST00000372056 MOB2Q70IA6 237 aa14.54□□□□□ -0.08
LDB3-203ENST00000372056 C17orf53Q8N3J3 647 aaPredicted RBP14.54□□□□□ -0.08
LDB3-203ENST00000372056 HAS1Q92839 578 aa14.54□□□□□ -0.08
LDB3-203ENST00000372056 CCDC102AQ96A19 550 aa14.54□□□□□ -0.08
LDB3-203ENST00000372056 ASCC2Q9H1I8 757 aaPredicted RBP14.54□□□□□ -0.08
LDB3-203ENST00000372056 RNF146Q9NTX7 359 aa14.54□□□□□ -0.08
LDB3-203ENST00000372056 LRWD1Q9UFC0 647 aa14.54□□□□□ -0.08
LDB3-203ENST00000372056 RLFQ13129 1914 aa14.53□□□□□ -0.08
LDB3-203ENST00000372056 MANSC4A6NHS7 340 aaPredicted RBP14.53□□□□□ -0.08
LDB3-203ENST00000372056 HERVK_113P62684 666 aa14.53□□□□□ -0.08
LDB3-203ENST00000372056 KCNB1Q14721 858 aa14.53□□□□□ -0.08
LDB3-203ENST00000372056 TMEM132BQ14DG7 1078 aa14.53□□□□□ -0.08
LDB3-203ENST00000372056 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.53□□□□□ -0.08
LDB3-203ENST00000372056 SHCBP1Q8NEM2 672 aa14.53□□□□□ -0.08
LDB3-203ENST00000372056 CALML4Q96GE6 196 aa14.53□□□□□ -0.08
LDB3-203ENST00000372056 NAP1L5Q96NT1 182 aaPredicted RBP14.53□□□□□ -0.08
LDB3-203ENST00000372056 P2RX7Q99572 595 aaKnown RBP14.53□□□□□ -0.08
LDB3-203ENST00000372056 MROH8Q9H579 483 aa14.53□□□□□ -0.08
LDB3-203ENST00000372056 SAMSN1Q9NSI8 373 aaKnown RBP14.53□□□□□ -0.08
LDB3-203ENST00000372056 TESPA1A2RU30 521 aaPredicted RBP14.52□□□□□ -0.08
LDB3-203ENST00000372056 POTEMA6NI47 508 aa14.52□□□□□ -0.08
LDB3-203ENST00000372056 KLRC4O43908 158 aa14.52□□□□□ -0.08
LDB3-203ENST00000372056 BCRP11274 1271 aa14.52□□□□□ -0.08
LDB3-203ENST00000372056 HUNKP57058 714 aa14.52□□□□□ -0.08
LDB3-203ENST00000372056 GRB10Q13322 594 aa14.52□□□□□ -0.08
LDB3-203ENST00000372056 TREML2Q5T2D2 321 aa14.52□□□□□ -0.08
LDB3-203ENST00000372056 TMC6Q7Z403 805 aa14.52□□□□□ -0.08
LDB3-203ENST00000372056 DNERQ8NFT8 737 aa14.52□□□□□ -0.08
LDB3-203ENST00000372056 INTS13Q9NVM9 706 aa14.52□□□□□ -0.08
LDB3-203ENST00000372056 TAL1P17542 331 aaPredicted RBP14.52□□□□□ -0.09
LDB3-203ENST00000372056 FSTL1Q12841 308 aa14.52□□□□□ -0.09
LDB3-203ENST00000372056 HSP90AA4PQ58FG1 418 aa14.52□□□□□ -0.09
LDB3-203ENST00000372056 CDKAL1Q5VV42 579 aa14.52□□□□□ -0.09
LDB3-203ENST00000372056 CST9Q5W186 159 aa14.52□□□□□ -0.09
LDB3-203ENST00000372056 PCNX4Q63HM2 1172 aa14.52□□□□□ -0.09
LDB3-203ENST00000372056 REM2Q8IYK8 340 aaPredicted RBP14.52□□□□□ -0.09
LDB3-203ENST00000372056 NSUN6Q8TEA1 469 aaKnown RBP14.52□□□□□ -0.09
LDB3-203ENST00000372056 ZNF526Q8TF50 670 aaPredicted RBP14.52□□□□□ -0.09
LDB3-203ENST00000372056 CNKSR2Q8WXI2 1034 aa14.52□□□□□ -0.09
LDB3-203ENST00000372056 MS4A4AQ96JQ5 239 aa14.52□□□□□ -0.09
LDB3-203ENST00000372056 IWS1Q96ST2 819 aa14.52□□□□□ -0.09
LDB3-203ENST00000372056 TRIM9Q9C026 710 aa14.52□□□□□ -0.09
LDB3-203ENST00000372056 SPATC1LQ9H0A9 340 aa14.52□□□□□ -0.09
LDB3-203ENST00000372056 KCNMB3Q9NPA1 279 aa14.52□□□□□ -0.09
LDB3-203ENST00000372056 STK17AQ9UEE5 414 aa14.52□□□□□ -0.09
LDB3-203ENST00000372056 PCDHA12Q9UN75 941 aa14.52□□□□□ -0.09
LDB3-203ENST00000372056 FRMPD4Q14CM0 1322 aa14.51□□□□□ -0.09
LDB3-203ENST00000372056 RPTORQ8N122 1335 aa14.51□□□□□ -0.09
LDB3-203ENST00000372056 PASKQ96RG2 1323 aa14.51□□□□□ -0.09
LDB3-203ENST00000372056 RBBP6Q7Z6E9 1792 aaKnown RBP14.51□□□□□ -0.09
LDB3-203ENST00000372056 CCL15-CCL14A0A0B4J2E2 113 aa14.51□□□□□ -0.09
LDB3-203ENST00000372056 TOMM70O94826 608 aa14.51□□□□□ -0.09
LDB3-203ENST00000372056 RHOBTB3O94955 611 aa14.51□□□□□ -0.09
LDB3-203ENST00000372056 STX17P56962 302 aa14.51□□□□□ -0.09
LDB3-203ENST00000372056 MOGSQ13724 837 aa14.51□□□□□ -0.09
LDB3-203ENST00000372056 CCL15Q16663 113 aa14.51□□□□□ -0.09
LDB3-203ENST00000372056 KMT5BQ4FZB7 885 aa14.51□□□□□ -0.09
LDB3-203ENST00000372056 GPAT2Q6NUI2 795 aa14.51□□□□□ -0.09
LDB3-203ENST00000372056 FCHSD1Q86WN1 690 aa14.51□□□□□ -0.09
LDB3-203ENST00000372056 VSTM4Q8IW00 320 aa14.51□□□□□ -0.09
LDB3-203ENST00000372056 PNMA5Q96PV4 448 aa14.51□□□□□ -0.09
LDB3-203ENST00000372056 PARK7Q99497 189 aaKnown RBP14.51□□□□□ -0.09
LDB3-203ENST00000372056 C7orf25Q9BPX7 421 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms