RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 RYBPQ8N488 228 aaPredicted RBP24.05■■□□□ 1.44
TM9SF3-201ENST00000371142 PLEKHF1Q96S99 279 aa24.05■■□□□ 1.44
TM9SF3-201ENST00000371142 PUS7LQ9H0K6 701 aaKnown RBP24.05■■□□□ 1.44
TM9SF3-201ENST00000371142 SLC38A10Q9HBR0 1119 aa24.05■■□□□ 1.44
TM9SF3-201ENST00000371142 CCT5P48643 541 aa24.04■■□□□ 1.44
TM9SF3-201ENST00000371142 TFAMQ00059 246 aaKnown RBP24.04■■□□□ 1.44
TM9SF3-201ENST00000371142 IL9RQ01113 521 aa24.04■■□□□ 1.44
TM9SF3-201ENST00000371142 ABI1Q8IZP0 508 aa24.04■■□□□ 1.44
TM9SF3-201ENST00000371142 SLC17A8Q8NDX2 589 aa24.04■■□□□ 1.44
TM9SF3-201ENST00000371142 GPR108Q9NPR9 543 aa24.04■■□□□ 1.44
TM9SF3-201ENST00000371142 USH1CQ9Y6N9 552 aa24.04■■□□□ 1.44
TM9SF3-201ENST00000371142 FTCDO95954 541 aa24.04■■□□□ 1.44
TM9SF3-201ENST00000371142 TDRD7Q8NHU6 1098 aaKnown RBP24.04■■□□□ 1.44
TM9SF3-201ENST00000371142 CHMP6Q96FZ7 201 aa24.04■■□□□ 1.44
TM9SF3-201ENST00000371142 XPOTO43592 962 aaKnown RBP24.04■■□□□ 1.44
TM9SF3-201ENST00000371142 MMP1P03956 469 aa24.04■■□□□ 1.44
TM9SF3-201ENST00000371142 PTPREP23469 700 aa24.04■■□□□ 1.44
TM9SF3-201ENST00000371142 MAN2A1Q16706 1144 aa24.04■■□□□ 1.44
TM9SF3-201ENST00000371142 UBE2SQ16763 222 aa24.04■■□□□ 1.44
TM9SF3-201ENST00000371142 GAS2L3Q86XJ1 694 aa24.04■■□□□ 1.44
TM9SF3-201ENST00000371142 RETREG2Q8NC44 543 aa24.04■■□□□ 1.44
TM9SF3-201ENST00000371142 KIF23Q02241 960 aaPredicted RBP24.04■■□□□ 1.44
TM9SF3-201ENST00000371142 TMTC4Q5T4D3 741 aa24.04■■□□□ 1.44
TM9SF3-201ENST00000371142 USP17L2Q6R6M4 530 aa24.04■■□□□ 1.44
TM9SF3-201ENST00000371142 MYLK4Q86YV6 388 aaPredicted RBP24.04■■□□□ 1.44
TM9SF3-201ENST00000371142 STAG1Q8WVM7 1258 aa24.04■■□□□ 1.44
TM9SF3-201ENST00000371142 DYNLL2Q96FJ2 89 aa24.04■■□□□ 1.44
TM9SF3-201ENST00000371142 UBE2TQ9NPD8 197 aaPredicted RBP24.04■■□□□ 1.44
TM9SF3-201ENST00000371142 HEXIM1O94992 359 aaKnown RBP24.04■■□□□ 1.44
TM9SF3-201ENST00000371142 PLTPP55058 493 aa24.04■■□□□ 1.44
TM9SF3-201ENST00000371142 COG7P83436 770 aa24.04■■□□□ 1.44
TM9SF3-201ENST00000371142 TMED2Q15363 201 aa24.04■■□□□ 1.44
TM9SF3-201ENST00000371142 CYP4F22Q6NT55 531 aa24.04■■□□□ 1.44
TM9SF3-201ENST00000371142 ACRBPQ8NEB7 543 aa24.04■■□□□ 1.44
TM9SF3-201ENST00000371142 KIF9Q9HAQ2 790 aa24.04■■□□□ 1.44
TM9SF3-201ENST00000371142 GCNT4Q9P109 453 aa24.04■■□□□ 1.44
TM9SF3-201ENST00000371142 CCND2P30279 289 aa24.03■■□□□ 1.44
TM9SF3-201ENST00000371142 OSTNP61366 133 aa24.03■■□□□ 1.44
TM9SF3-201ENST00000371142 SPDL1Q96EA4 605 aa24.03■■□□□ 1.44
TM9SF3-201ENST00000371142 ATP8A1Q9Y2Q0 1164 aa24.03■■□□□ 1.44
TM9SF3-201ENST00000371142 DAAM1Q9Y4D1 1078 aa24.03■■□□□ 1.44
TM9SF3-201ENST00000371142 ANGPTL3Q9Y5C1 460 aa24.03■■□□□ 1.44
TM9SF3-201ENST00000371142 DACT3Q96B18 629 aaPredicted RBP24.03■■□□□ 1.44
TM9SF3-201ENST00000371142 GOLGA8CPA6NN73 597 aa24.03■■□□□ 1.44
TM9SF3-201ENST00000371142 USP17L8P0C7I0 530 aa24.03■■□□□ 1.44
TM9SF3-201ENST00000371142 NXF1Q9UBU9 619 aaKnown RBP24.03■■□□□ 1.44
TM9SF3-201ENST00000371142 SMIM24O75264 130 aa24.03■■□□□ 1.44
TM9SF3-201ENST00000371142 SERPINB2P05120 415 aa24.03■■□□□ 1.44
TM9SF3-201ENST00000371142 C7orf31Q8N865 590 aa24.03■■□□□ 1.44
TM9SF3-201ENST00000371142 TRIM11Q96F44 468 aa24.03■■□□□ 1.44
TM9SF3-201ENST00000371142 CYP2D7A0A087X1C5 515 aa24.03■■□□□ 1.44
TM9SF3-201ENST00000371142 CPP00450 1065 aa24.03■■□□□ 1.44
TM9SF3-201ENST00000371142 EEPD1Q7L9B9 569 aa24.03■■□□□ 1.44
TM9SF3-201ENST00000371142 SRGAP2BP0DMP2 458 aa24.02■■□□□ 1.44
TM9SF3-201ENST00000371142 ZKSCAN8Q15776 578 aaPredicted RBP24.02■■□□□ 1.44
TM9SF3-201ENST00000371142 SDCCAG3Q96C92 435 aa24.02■■□□□ 1.44
TM9SF3-201ENST00000371142 IL6STP40189 918 aaPredicted RBP24.02■■□□□ 1.44
TM9SF3-201ENST00000371142 SPATS2Q86XZ4 545 aaKnown RBP24.02■■□□□ 1.44
TM9SF3-201ENST00000371142 STK17AQ9UEE5 414 aa24.02■■□□□ 1.44
TM9SF3-201ENST00000371142 SOWAHDA6NJG2 315 aa24.02■■□□□ 1.44
TM9SF3-201ENST00000371142 ATXN8OSP0DMR3 200 aa24.02■■□□□ 1.44
TM9SF3-201ENST00000371142 BMP3P12645 472 aa24.02■■□□□ 1.44
TM9SF3-201ENST00000371142 OSBPP22059 807 aa24.02■■□□□ 1.44
TM9SF3-201ENST00000371142 STAT2P52630 851 aa24.02■■□□□ 1.44
TM9SF3-201ENST00000371142 APBA1Q02410 837 aa24.02■■□□□ 1.44
TM9SF3-201ENST00000371142 Q9H521 79 aa24.02■■□□□ 1.44
TM9SF3-201ENST00000371142 SH2B2O14492 632 aaPredicted RBP24.02■■□□□ 1.44
TM9SF3-201ENST00000371142 MTERF2Q49AM1 385 aa24.02■■□□□ 1.44
TM9SF3-201ENST00000371142 NLRP7Q8WX94 980 aa24.02■■□□□ 1.44
TM9SF3-201ENST00000371142 USP14P54578 494 aa24.02■■□□□ 1.44
TM9SF3-201ENST00000371142 METTL23Q86XA0 190 aa24.02■■□□□ 1.44
TM9SF3-201ENST00000371142 RABGGTAQ92696 567 aa24.02■■□□□ 1.44
TM9SF3-201ENST00000371142 NACC1Q96RE7 527 aa24.02■■□□□ 1.44
TM9SF3-201ENST00000371142 WDR11Q9BZH6 1224 aa24.02■■□□□ 1.44
TM9SF3-201ENST00000371142 SUN1O94901 812 aa24.01■■□□□ 1.43
TM9SF3-201ENST00000371142 FAM196AQ6ZSG2 479 aa24.01■■□□□ 1.43
TM9SF3-201ENST00000371142 FIS1Q9Y3D6 152 aa24.01■■□□□ 1.43
TM9SF3-201ENST00000371142 DDIT3P35638 169 aa24.01■■□□□ 1.43
TM9SF3-201ENST00000371142 ARPP19P56211 112 aa24.01■■□□□ 1.43
TM9SF3-201ENST00000371142 SYDE2Q5VT97 1194 aa24.01■■□□□ 1.43
TM9SF3-201ENST00000371142 SAMSN1Q9NSI8 373 aaKnown RBP24.01■■□□□ 1.43
TM9SF3-201ENST00000371142 RNF123Q5XPI4 1314 aa24.01■■□□□ 1.43
TM9SF3-201ENST00000371142 SNAP25P60880 206 aa24.01■■□□□ 1.43
TM9SF3-201ENST00000371142 SLC12A1Q13621 1099 aa24.01■■□□□ 1.43
TM9SF3-201ENST00000371142 FAM182BQ5T319 152 aa24.01■■□□□ 1.43
TM9SF3-201ENST00000371142 DNAAF3Q8N9W5 541 aa24.01■■□□□ 1.43
TM9SF3-201ENST00000371142 EIF3CLB5ME19 914 aaKnown RBP24.01■■□□□ 1.43
TM9SF3-201ENST00000371142 ECEL1O95672 775 aa24.01■■□□□ 1.43
TM9SF3-201ENST00000371142 XPAP23025 273 aaPredicted RBP24.01■■□□□ 1.43
TM9SF3-201ENST00000371142 MAP2K2P36507 400 aa24.01■■□□□ 1.43
TM9SF3-201ENST00000371142 RAB44Q7Z6P3 723 aaPredicted RBP24.01■■□□□ 1.43
TM9SF3-201ENST00000371142 ATP6V1E2Q96A05 226 aa24.01■■□□□ 1.43
TM9SF3-201ENST00000371142 EIF3CQ99613 913 aaKnown RBP24.01■■□□□ 1.43
TM9SF3-201ENST00000371142 AP5M1Q9H0R1 490 aa24.01■■□□□ 1.43
TM9SF3-201ENST00000371142 IFT122Q9HBG6 1241 aa24.01■■□□□ 1.43
TM9SF3-201ENST00000371142 FAN1Q9Y2M0 1017 aa24.01■■□□□ 1.43
TM9SF3-201ENST00000371142 TRIP13Q15645 432 aaPredicted RBP24.01■■□□□ 1.43
TM9SF3-201ENST00000371142 HAUS8Q9BT25 410 aa24.01■■□□□ 1.43
TM9SF3-201ENST00000371142 KANSL2Q9H9L4 492 aa24.01■■□□□ 1.43
TM9SF3-201ENST00000371142 MCF2LO15068 1137 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms