RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 MAPK4P31152 587 aa9.3□□□□□ -0.92
ABCA4-201ENST00000370225 NR5A1Q13285 461 aa9.3□□□□□ -0.92
ABCA4-201ENST00000370225 OR6B2Q6IFH4 312 aa9.3□□□□□ -0.92
ABCA4-201ENST00000370225 RWDD4Q6NW29 188 aaKnown RBP9.3□□□□□ -0.92
ABCA4-201ENST00000370225 ARHGEF25Q86VW2 580 aa9.3□□□□□ -0.92
ABCA4-201ENST00000370225 FAM186BQ8IYM0 893 aa9.3□□□□□ -0.92
ABCA4-201ENST00000370225 SIX6OS1Q8N1H7 587 aa9.3□□□□□ -0.92
ABCA4-201ENST00000370225 CEP120Q8N960 986 aa9.3□□□□□ -0.92
ABCA4-201ENST00000370225 DNAAF3Q8N9W5 541 aa9.3□□□□□ -0.92
ABCA4-201ENST00000370225 TRIM58Q8NG06 486 aa9.3□□□□□ -0.92
ABCA4-201ENST00000370225 CDC26Q8NHZ8 85 aa9.3□□□□□ -0.92
ABCA4-201ENST00000370225 HEXIM1O94992 359 aaKnown RBP9.29□□□□□ -0.92
ABCA4-201ENST00000370225 NCAPGQ9BPX3 1015 aa9.29□□□□□ -0.92
ABCA4-201ENST00000370225 FEZ2Q9UHY8 353 aaPredicted RBP9.29□□□□□ -0.92
ABCA4-201ENST00000370225 PEG3Q9GZU2 1588 aa9.29□□□□□ -0.92
ABCA4-201ENST00000370225 LMNB1P20700 586 aa9.29□□□□□ -0.92
ABCA4-201ENST00000370225 CRKP46108 304 aa9.29□□□□□ -0.92
ABCA4-201ENST00000370225 SLFNL1Q499Z3 407 aa9.29□□□□□ -0.92
ABCA4-201ENST00000370225 ZMYM1Q5SVZ6 1142 aa9.29□□□□□ -0.92
ABCA4-201ENST00000370225 C1orf228Q6PIY5 440 aa9.29□□□□□ -0.92
ABCA4-201ENST00000370225 B4GALNT4Q76KP1 1039 aa9.29□□□□□ -0.92
ABCA4-201ENST00000370225 BANK1Q8NDB2 785 aa9.29□□□□□ -0.92
ABCA4-201ENST00000370225 MIS12Q9H081 205 aa9.29□□□□□ -0.92
ABCA4-201ENST00000370225 CARMIL3Q8ND23 1372 aa9.29□□□□□ -0.92
ABCA4-201ENST00000370225 GFPT2O94808 682 aa9.29□□□□□ -0.92
ABCA4-201ENST00000370225 MYO1EQ12965 1108 aa9.29□□□□□ -0.92
ABCA4-201ENST00000370225 MMEL1Q495T6 779 aa9.29□□□□□ -0.92
ABCA4-201ENST00000370225 SMIM5Q71RC9 77 aa9.29□□□□□ -0.92
ABCA4-201ENST00000370225 RNF139Q8WU17 664 aa9.29□□□□□ -0.92
ABCA4-201ENST00000370225 HSPH1Q92598 858 aa9.29□□□□□ -0.92
ABCA4-201ENST00000370225 RSRC1Q96IZ7 334 aaKnown RBP9.29□□□□□ -0.92
ABCA4-201ENST00000370225 CALN1Q9BXU9 219 aa9.29□□□□□ -0.92
ABCA4-201ENST00000370225 RPF1Q9H9Y2 349 aaKnown RBP9.29□□□□□ -0.92
ABCA4-201ENST00000370225 ENC1O14682 589 aa9.29□□□□□ -0.92
ABCA4-201ENST00000370225 TUBBP07437 444 aa9.29□□□□□ -0.92
ABCA4-201ENST00000370225 TMEM63CQ9P1W3 806 aa9.29□□□□□ -0.92
ABCA4-201ENST00000370225 KIF1BO60333 1816 aa9.29□□□□□ -0.92
ABCA4-201ENST00000370225 CYP2D6P10635 497 aa9.29□□□□□ -0.92
ABCA4-201ENST00000370225 CFAP36Q96G28 342 aa9.29□□□□□ -0.92
ABCA4-201ENST00000370225 RMDN2Q96LZ7 410 aa9.29□□□□□ -0.92
ABCA4-201ENST00000370225 METTL14Q9HCE5 456 aaKnown RBP9.29□□□□□ -0.92
ABCA4-201ENST00000370225 PIH1D3Q9NQM4 214 aaKnown RBP9.29□□□□□ -0.92
ABCA4-201ENST00000370225 PNMA2Q9UL42 364 aa9.29□□□□□ -0.92
ABCA4-201ENST00000370225 GDAQ9Y2T3 454 aa9.29□□□□□ -0.92
ABCA4-201ENST00000370225 EPHB1P54762 984 aa9.29□□□□□ -0.92
ABCA4-201ENST00000370225 TRIP13Q15645 432 aaPredicted RBP9.29□□□□□ -0.92
ABCA4-201ENST00000370225 BBS5Q8N3I7 341 aa9.29□□□□□ -0.92
ABCA4-201ENST00000370225 PIGOQ8TEQ8 1089 aa9.29□□□□□ -0.92
ABCA4-201ENST00000370225 CCDC94Q9BW85 323 aaPredicted RBP9.29□□□□□ -0.92
ABCA4-201ENST00000370225 GCNT4Q9P109 453 aa9.29□□□□□ -0.92
ABCA4-201ENST00000370225 DISP1Q96F81 1524 aa9.29□□□□□ -0.92
ABCA4-201ENST00000370225 MYO1FO00160 1098 aa9.28□□□□□ -0.92
ABCA4-201ENST00000370225 SNAP23O00161 211 aa9.28□□□□□ -0.92
ABCA4-201ENST00000370225 AFPP02771 609 aaKnown RBP9.28□□□□□ -0.92
ABCA4-201ENST00000370225 KRT1P04264 644 aa9.28□□□□□ -0.92
ABCA4-201ENST00000370225 TUBB2AQ13885 445 aa9.28□□□□□ -0.92
ABCA4-201ENST00000370225 MAP7Q14244 749 aa9.28□□□□□ -0.92
ABCA4-201ENST00000370225 TBC1D9BQ66K14 1250 aa9.28□□□□□ -0.92
ABCA4-201ENST00000370225 FAM133AQ8N9E0 248 aa9.28□□□□□ -0.92
ABCA4-201ENST00000370225 OTUD5Q96G74 571 aa9.28□□□□□ -0.92
ABCA4-201ENST00000370225 CABS1Q96KC9 395 aa9.28□□□□□ -0.92
ABCA4-201ENST00000370225 TUBGCP2Q9BSJ2 902 aa9.28□□□□□ -0.92
ABCA4-201ENST00000370225 TUBB2BQ9BVA1 445 aa9.28□□□□□ -0.92
ABCA4-201ENST00000370225 PNMA3Q9UL41 463 aa9.28□□□□□ -0.92
ABCA4-201ENST00000370225 HYOU1Q9Y4L1 999 aa9.28□□□□□ -0.92
ABCA4-201ENST00000370225 DENND3A2RUS2 1198 aa9.28□□□□□ -0.92
ABCA4-201ENST00000370225 BAG2O95816 211 aa9.28□□□□□ -0.92
ABCA4-201ENST00000370225 TROVE2P10155 538 aaKnown RBP eCLIP9.28□□□□□ -0.92
ABCA4-201ENST00000370225 GARSP41250 739 aaKnown RBP9.28□□□□□ -0.92
ABCA4-201ENST00000370225 PDE1BQ01064 536 aa9.28□□□□□ -0.92
ABCA4-201ENST00000370225 IQCB1Q15051 598 aa9.28□□□□□ -0.92
ABCA4-201ENST00000370225 APOA5Q6Q788 366 aa9.28□□□□□ -0.92
ABCA4-201ENST00000370225 TM6SF1Q9BZW5 370 aa9.28□□□□□ -0.92
ABCA4-201ENST00000370225 DHX36Q9H2U1 1008 aaKnown RBP9.28□□□□□ -0.92
ABCA4-201ENST00000370225 OGFRQ9NZT2 677 aa9.28□□□□□ -0.92
ABCA4-201ENST00000370225 ABCB11O95342 1321 aa9.28□□□□□ -0.92
ABCA4-201ENST00000370225 KRT3P12035 628 aa9.28□□□□□ -0.92
ABCA4-201ENST00000370225 CMA1P23946 247 aa9.28□□□□□ -0.92
ABCA4-201ENST00000370225 COPB1P53618 953 aaKnown RBP9.28□□□□□ -0.92
ABCA4-201ENST00000370225 DARS2Q6PI48 645 aaKnown RBP9.28□□□□□ -0.92
ABCA4-201ENST00000370225 OR6B3Q8NGW1 331 aa9.28□□□□□ -0.92
ABCA4-201ENST00000370225 JPH2Q9BR39 696 aaPredicted RBP9.28□□□□□ -0.92
ABCA4-201ENST00000370225 MSTO1Q9BUK6 570 aa9.28□□□□□ -0.92
ABCA4-201ENST00000370225 LSG1Q9H089 658 aaKnown RBP9.28□□□□□ -0.92
ABCA4-201ENST00000370225 CPVLQ9H3G5 476 aa9.28□□□□□ -0.92
ABCA4-201ENST00000370225 POLD4Q9HCU8 107 aa9.28□□□□□ -0.92
ABCA4-201ENST00000370225 FAM114A2Q9NRY5 505 aa9.28□□□□□ -0.92
ABCA4-201ENST00000370225 OAS2P29728 719 aaKnown RBP9.28□□□□□ -0.92
ABCA4-201ENST00000370225 MAP7D3Q8IWC1 876 aa9.28□□□□□ -0.92
ABCA4-201ENST00000370225 SYNE4Q8N205 404 aa9.28□□□□□ -0.92
ABCA4-201ENST00000370225 TACO1Q9BSH4 297 aaKnown RBP9.28□□□□□ -0.92
ABCA4-201ENST00000370225 ZWILCHQ9H900 591 aa9.28□□□□□ -0.92
ABCA4-201ENST00000370225 SRGAP2BP0DMP2 458 aa9.28□□□□□ -0.92
ABCA4-201ENST00000370225 RASGRF1Q13972 1273 aa9.28□□□□□ -0.92
ABCA4-201ENST00000370225 ZNF394Q53GI3 561 aa9.28□□□□□ -0.92
ABCA4-201ENST00000370225 VCXQ9H320 206 aa9.28□□□□□ -0.92
ABCA4-201ENST00000370225 ZSWIM5Q9P217 1185 aa9.28□□□□□ -0.92
ABCA4-201ENST00000370225 MTMR6Q9Y217 621 aa9.28□□□□□ -0.92
ABCA4-201ENST00000370225 ROBO2Q9HCK4 1378 aa9.28□□□□□ -0.92
ABCA4-201ENST00000370225 GOLGA8CPA6NN73 597 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 1899.7 ms