RNA–Protein interactions for RNA: ENST00000369258.8

CHD1L-202, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1L, Length 2,967 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-202ENST00000369258 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.25□□□□□ -0.133e-6■■■■■ 81.5
CHD1L-202ENST00000369258 PLAGL2Q9UPG8 496 aa14.25□□□□□ -0.13
CHD1L-202ENST00000369258 FAM196BA6NMK8 535 aa14.24□□□□□ -0.13
CHD1L-202ENST00000369258 E9PMD0 336 aa14.24□□□□□ -0.13
CHD1L-202ENST00000369258 PRLRP16471 622 aa14.24□□□□□ -0.13
CHD1L-202ENST00000369258 STAT3P40763 770 aa14.24□□□□□ -0.13
CHD1L-202ENST00000369258 SEMA3FQ13275 785 aa14.24□□□□□ -0.13
CHD1L-202ENST00000369258 PARP10Q53GL7 1025 aa14.24□□□□□ -0.13
CHD1L-202ENST00000369258 NAA35Q5VZE5 725 aa14.24□□□□□ -0.13
CHD1L-202ENST00000369258 SNX29Q8TEQ0 813 aa14.24□□□□□ -0.13
CHD1L-202ENST00000369258 RUBCNQ92622 972 aa14.24□□□□□ -0.13
CHD1L-202ENST00000369258 CDK5RAP3Q96JB5 506 aa14.24□□□□□ -0.13
CHD1L-202ENST00000369258 RNPC3Q96LT9 517 aaKnown RBP14.24□□□□□ -0.13
CHD1L-202ENST00000369258 SH3GL2Q99962 352 aa14.24□□□□□ -0.13
CHD1L-202ENST00000369258 BCCIPQ9P287 314 aaKnown RBP eCLIP14.24□□□□□ -0.13
CHD1L-202ENST00000369258 A0A087X0T9 212 aa14.24□□□□□ -0.13
CHD1L-202ENST00000369258 ZNF233A6NK53 670 aa14.24□□□□□ -0.13
CHD1L-202ENST00000369258 MEIS1O00470 390 aa14.24□□□□□ -0.13
CHD1L-202ENST00000369258 FAM228BP0C875 321 aa14.24□□□□□ -0.13
CHD1L-202ENST00000369258 INPP5BP32019 993 aa14.24□□□□□ -0.13
CHD1L-202ENST00000369258 NNTQ13423 1086 aa14.24□□□□□ -0.13
CHD1L-202ENST00000369258 NONOQ15233 471 aaKnown RBP eCLIP14.24□□□□□ -0.13
CHD1L-202ENST00000369258 GPATCH11Q8N954 259 aa14.24□□□□□ -0.13
CHD1L-202ENST00000369258 EYA3Q99504 573 aa14.24□□□□□ -0.13
CHD1L-202ENST00000369258 MXD3Q9BW11 206 aa14.24□□□□□ -0.13
CHD1L-202ENST00000369258 TRIM31Q9BZY9 425 aa14.24□□□□□ -0.13
CHD1L-202ENST00000369258 SH3GLB2Q9NR46 395 aa14.24□□□□□ -0.13
CHD1L-202ENST00000369258 NDUFAB1O14561 156 aa14.23□□□□□ -0.13
CHD1L-202ENST00000369258 GRM4Q14833 912 aa14.23□□□□□ -0.13
CHD1L-202ENST00000369258 NEK8Q86SG6 692 aa14.23□□□□□ -0.13
CHD1L-202ENST00000369258 BAP1Q92560 729 aa14.23□□□□□ -0.13
CHD1L-202ENST00000369258 ATP8A2Q9NTI2 1148 aa14.23□□□□□ -0.13
CHD1L-202ENST00000369258 ARPP21Q9UBL0 812 aaPredicted RBP14.23□□□□□ -0.13
CHD1L-202ENST00000369258 LRP5O75197 1615 aa14.23□□□□□ -0.13
CHD1L-202ENST00000369258 DCCP43146 1447 aa14.23□□□□□ -0.13
CHD1L-202ENST00000369258 LDHBP07195 334 aaKnown RBP14.23□□□□□ -0.13
CHD1L-202ENST00000369258 NBPF9Q3BBW0 867 aa14.23□□□□□ -0.13
CHD1L-202ENST00000369258 GJB7Q6PEY0 223 aa14.23□□□□□ -0.13
CHD1L-202ENST00000369258 SV2BQ7L1I2 683 aa14.23□□□□□ -0.13
CHD1L-202ENST00000369258 ZNF572Q7Z3I7 529 aaPredicted RBP14.23□□□□□ -0.13
CHD1L-202ENST00000369258 ZSCAN29Q8IWY8 852 aaPredicted RBP14.23□□□□□ -0.13
CHD1L-202ENST00000369258 LSM14BQ9BX40 385 aaKnown RBP14.23□□□□□ -0.13
CHD1L-202ENST00000369258 CUEDC2Q9H467 287 aa14.23□□□□□ -0.13
CHD1L-202ENST00000369258 TMCO5BA8MYB1 307 aa14.22□□□□□ -0.13
CHD1L-202ENST00000369258 FLT3P36888 993 aa14.22□□□□□ -0.13
CHD1L-202ENST00000369258 HLTFQ14527 1009 aaKnown RBP eCLIP14.22□□□□□ -0.13
CHD1L-202ENST00000369258 CALCRLQ16602 461 aa14.22□□□□□ -0.13
CHD1L-202ENST00000369258 CCDC40Q4G0X9 1142 aa14.22□□□□□ -0.13
CHD1L-202ENST00000369258 LARP4BQ92615 738 aaKnown RBP14.22□□□□□ -0.13
CHD1L-202ENST00000369258 IQCDQ96DY2 449 aa14.22□□□□□ -0.13
CHD1L-202ENST00000369258 MAGEF1Q9HAY2 307 aa14.22□□□□□ -0.13
CHD1L-202ENST00000369258 PPANQ9NQ55 473 aaKnown RBP14.22□□□□□ -0.13
CHD1L-202ENST00000369258 CHORDC1Q9UHD1 332 aaPredicted RBP14.22□□□□□ -0.13
CHD1L-202ENST00000369258 PLCH1Q4KWH8 1693 aa14.22□□□□□ -0.13
CHD1L-202ENST00000369258 ARAP2Q8WZ64 1704 aa14.22□□□□□ -0.13
CHD1L-202ENST00000369258 ANKRD36CQ5JPF3 1778 aa14.22□□□□□ -0.13
CHD1L-202ENST00000369258 DCDC2CA8MYV0 355 aa14.22□□□□□ -0.13
CHD1L-202ENST00000369258 MARCH6O60337 910 aa14.22□□□□□ -0.13
CHD1L-202ENST00000369258 PPP1R2P41236 205 aa14.22□□□□□ -0.13
CHD1L-202ENST00000369258 AMPD3Q01432 767 aa14.22□□□□□ -0.13
CHD1L-202ENST00000369258 KIAA0753Q2KHM9 967 aa14.22□□□□□ -0.13
CHD1L-202ENST00000369258 HGSNATQ68CP4 663 aa14.22□□□□□ -0.13
CHD1L-202ENST00000369258 CNNM4Q6P4Q7 775 aa14.22□□□□□ -0.13
CHD1L-202ENST00000369258 MAATS1Q7Z4T9 603 aa14.22□□□□□ -0.13
CHD1L-202ENST00000369258 SUGP1Q8IWZ8 645 aaKnown RBP14.22□□□□□ -0.13
CHD1L-202ENST00000369258 A0A1B0GUL6 1792 aa14.22□□□□□ -0.13
CHD1L-202ENST00000369258 NHSL1Q5SYE7 1610 aa14.22□□□□□ -0.13
CHD1L-202ENST00000369258 PALM3A6NDB9 673 aaPredicted RBP14.22□□□□□ -0.13
CHD1L-202ENST00000369258 NOL4O94818 638 aa14.22□□□□□ -0.13
CHD1L-202ENST00000369258 EPB41P11171 864 aaKnown RBP14.22□□□□□ -0.13
CHD1L-202ENST00000369258 TMOD1P28289 359 aa14.22□□□□□ -0.13
CHD1L-202ENST00000369258 HNRNPH3P31942 346 aaKnown RBP14.22□□□□□ -0.13
CHD1L-202ENST00000369258 CDK8P49336 464 aa14.22□□□□□ -0.13
CHD1L-202ENST00000369258 KCTD1Q719H9 257 aa14.22□□□□□ -0.13
CHD1L-202ENST00000369258 REXO1Q8N1G1 1221 aaKnown RBP14.22□□□□□ -0.13
CHD1L-202ENST00000369258 CASKIN2Q8WXE0 1202 aa14.22□□□□□ -0.13
CHD1L-202ENST00000369258 CALML4Q96GE6 196 aa14.22□□□□□ -0.13
CHD1L-202ENST00000369258 A6NNZ2 444 aa14.21□□□□□ -0.13
CHD1L-202ENST00000369258 SFI1A8K8P3 1242 aa14.21□□□□□ -0.13
CHD1L-202ENST00000369258 USP17L15C9J2P7 530 aa14.21□□□□□ -0.13
CHD1L-202ENST00000369258 USP17L13C9JLJ4 530 aa14.21□□□□□ -0.13
CHD1L-202ENST00000369258 USP17L11C9JVI0 530 aa14.21□□□□□ -0.13
CHD1L-202ENST00000369258 USP17L18D6R9N7 530 aa14.21□□□□□ -0.13
CHD1L-202ENST00000369258 USP17L22D6RA61 530 aa14.21□□□□□ -0.13
CHD1L-202ENST00000369258 USP17L17D6RBQ6 530 aa14.21□□□□□ -0.13
CHD1L-202ENST00000369258 USP17L19D6RCP7 530 aa14.21□□□□□ -0.13
CHD1L-202ENST00000369258 USP17L20D6RJB6 530 aa14.21□□□□□ -0.13
CHD1L-202ENST00000369258 LAD1O00515 517 aa14.21□□□□□ -0.13
CHD1L-202ENST00000369258 KIAA0754O94854 1291 aa14.21□□□□□ -0.13
CHD1L-202ENST00000369258 CASP5P51878 434 aa14.21□□□□□ -0.13
CHD1L-202ENST00000369258 USP17L24Q0WX57 530 aa14.21□□□□□ -0.13
CHD1L-202ENST00000369258 TUBB8Q3ZCM7 444 aa14.21□□□□□ -0.13
CHD1L-202ENST00000369258 CFAP58Q5T655 872 aa14.21□□□□□ -0.13
CHD1L-202ENST00000369258 SPTY2D1Q68D10 685 aaPredicted RBP14.21□□□□□ -0.13
CHD1L-202ENST00000369258 MCTP2Q6DN12 878 aa14.21□□□□□ -0.13
CHD1L-202ENST00000369258 USP17L6PQ6QN14 398 aa14.21□□□□□ -0.13
CHD1L-202ENST00000369258 TRMT1LQ7Z2T5 733 aaKnown RBP14.21□□□□□ -0.13
CHD1L-202ENST00000369258 NLRP3Q96P20 1036 aa14.21□□□□□ -0.13
CHD1L-202ENST00000369258 C7orf25Q9BPX7 421 aa14.21□□□□□ -0.13
CHD1L-202ENST00000369258 YY1AP1Q9H869 796 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms