RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 SYKP43405 635 aa13.89□□□□□ -0.19
TUBE1-202ENST00000368662 SNW1Q13573 536 aaKnown RBP13.89□□□□□ -0.19
TUBE1-202ENST00000368662 GRB14Q14449 540 aa13.89□□□□□ -0.19
TUBE1-202ENST00000368662 CAVIN1Q6NZI2 390 aaKnown RBP13.89□□□□□ -0.19
TUBE1-202ENST00000368662 FMR1NBQ8N0W7 255 aaPredicted RBP13.89□□□□□ -0.19
TUBE1-202ENST00000368662 INPP4AQ96PE3 977 aaPredicted RBP13.89□□□□□ -0.19
TUBE1-202ENST00000368662 RIT2Q99578 217 aa13.89□□□□□ -0.19
TUBE1-202ENST00000368662 ZNF577Q9BSK1 485 aa13.89□□□□□ -0.19
TUBE1-202ENST00000368662 R3HDMLQ9H3Y0 253 aa13.89□□□□□ -0.19
TUBE1-202ENST00000368662 LRWD1Q9UFC0 647 aa13.89□□□□□ -0.19
TUBE1-202ENST00000368662 SOWAHBA6NEL2 793 aa13.88□□□□□ -0.19
TUBE1-202ENST00000368662 SLC15A5A6NIM6 579 aa13.88□□□□□ -0.19
TUBE1-202ENST00000368662 ASB14A6NK59 587 aa13.88□□□□□ -0.19
TUBE1-202ENST00000368662 PGK2P07205 417 aa13.88□□□□□ -0.19
TUBE1-202ENST00000368662 PDE4DQ08499 809 aa13.88□□□□□ -0.19
TUBE1-202ENST00000368662 SPECC1Q5M775 1068 aa13.88□□□□□ -0.19
TUBE1-202ENST00000368662 SLC5A5Q92911 643 aa13.88□□□□□ -0.19
TUBE1-202ENST00000368662 CFHR5Q9BXR6 569 aa13.88□□□□□ -0.19
TUBE1-202ENST00000368662 DIS3Q9Y2L1 958 aaKnown RBP13.88□□□□□ -0.19
TUBE1-202ENST00000368662 IPO5O00410 1097 aaKnown RBP13.88□□□□□ -0.19
TUBE1-202ENST00000368662 SLC26A4O43511 780 aa13.88□□□□□ -0.19
TUBE1-202ENST00000368662 CCDC183Q5T5S1 534 aa13.88□□□□□ -0.19
TUBE1-202ENST00000368662 LRCH2Q5VUJ6 765 aa13.88□□□□□ -0.19
TUBE1-202ENST00000368662 ZNF467Q7Z7K2 595 aaPredicted RBP13.88□□□□□ -0.19
TUBE1-202ENST00000368662 CCDC34Q96HJ3 373 aa13.88□□□□□ -0.19
TUBE1-202ENST00000368662 EPSTI1Q96J88 318 aa13.88□□□□□ -0.19
TUBE1-202ENST00000368662 TIGD1Q96MW7 591 aa13.88□□□□□ -0.19
TUBE1-202ENST00000368662 WDR11Q9BZH6 1224 aa13.88□□□□□ -0.19
TUBE1-202ENST00000368662 CCSER1Q9C0I3 900 aa13.88□□□□□ -0.19
TUBE1-202ENST00000368662 TBC1D22BQ9NU19 505 aa13.88□□□□□ -0.19
TUBE1-202ENST00000368662 CCDC39Q9UFE4 941 aa13.88□□□□□ -0.19
TUBE1-202ENST00000368662 LCTP09848 1927 aa13.88□□□□□ -0.19
TUBE1-202ENST00000368662 ASTN1O14525 1302 aa13.87□□□□□ -0.19
TUBE1-202ENST00000368662 ZNF202O95125 648 aa13.87□□□□□ -0.19
TUBE1-202ENST00000368662 VEGFBP49765 207 aa13.87□□□□□ -0.19
TUBE1-202ENST00000368662 ZNF792Q3KQV3 632 aa13.87□□□□□ -0.19
TUBE1-202ENST00000368662 DPP9Q86TI2 863 aa13.87□□□□□ -0.19
TUBE1-202ENST00000368662 MORC4Q8TE76 937 aa13.87□□□□□ -0.19
TUBE1-202ENST00000368662 PLXNB2O15031 1838 aa13.87□□□□□ -0.19
TUBE1-202ENST00000368662 GAS7O60861 476 aa13.87□□□□□ -0.19
TUBE1-202ENST00000368662 PSMD10O75832 226 aa13.87□□□□□ -0.19
TUBE1-202ENST00000368662 LETM1O95202 739 aaPredicted RBP13.87□□□□□ -0.19
TUBE1-202ENST00000368662 ARP10275 920 aa13.87□□□□□ -0.19
TUBE1-202ENST00000368662 KRT79Q5XKE5 535 aa13.87□□□□□ -0.19
TUBE1-202ENST00000368662 HAUS3Q68CZ6 603 aa13.87□□□□□ -0.19
TUBE1-202ENST00000368662 ERMNQ8TAM6 284 aa13.87□□□□□ -0.19
TUBE1-202ENST00000368662 TEKT3Q9BXF9 490 aa13.87□□□□□ -0.19
TUBE1-202ENST00000368662 NUP62CLQ9H1M0 184 aa13.87□□□□□ -0.19
TUBE1-202ENST00000368662 AGO4Q9HCK5 861 aaKnown RBP13.87□□□□□ -0.19
TUBE1-202ENST00000368662 USP25Q9UHP3 1055 aa13.87□□□□□ -0.19
TUBE1-202ENST00000368662 ZNF236Q9UL36 1845 aa13.86□□□□□ -0.19
TUBE1-202ENST00000368662 POTEMA6NI47 508 aa13.86□□□□□ -0.19
TUBE1-202ENST00000368662 CTAGE5O15320 804 aa13.86□□□□□ -0.19
TUBE1-202ENST00000368662 ICAM3P32942 547 aa13.86□□□□□ -0.19
TUBE1-202ENST00000368662 PPP2R5CQ13362 524 aa13.86□□□□□ -0.19
TUBE1-202ENST00000368662 KANK3Q6NY19 840 aa13.86□□□□□ -0.19
TUBE1-202ENST00000368662 USP49Q70CQ1 688 aa13.86□□□□□ -0.19
TUBE1-202ENST00000368662 IQUBQ8NA54 791 aa13.86□□□□□ -0.19
TUBE1-202ENST00000368662 RASSF8Q8NHQ8 419 aa13.86□□□□□ -0.19
TUBE1-202ENST00000368662 SOCS4Q8WXH5 440 aa13.86□□□□□ -0.19
TUBE1-202ENST00000368662 CALML4Q96GE6 196 aa13.86□□□□□ -0.19
TUBE1-202ENST00000368662 ZFP91Q96JP5 570 aaPredicted RBP13.86□□□□□ -0.19
TUBE1-202ENST00000368662 FGD4Q96M96 766 aa13.86□□□□□ -0.19
TUBE1-202ENST00000368662 TMEM63CQ9P1W3 806 aa13.86□□□□□ -0.19
TUBE1-202ENST00000368662 TCEAL9Q9UHQ7 104 aa13.86□□□□□ -0.19
TUBE1-202ENST00000368662 POLR2DO15514 142 aaKnown RBP13.85□□□□□ -0.19
TUBE1-202ENST00000368662 SPIRE1Q08AE8 756 aa13.85□□□□□ -0.19
TUBE1-202ENST00000368662 KCNV1Q6PIU1 500 aa13.85□□□□□ -0.19
TUBE1-202ENST00000368662 OTOP1Q7RTM1 612 aa13.85□□□□□ -0.19
TUBE1-202ENST00000368662 CABP7Q86V35 215 aa13.85□□□□□ -0.19
TUBE1-202ENST00000368662 ELOA2Q8IYF1 753 aaPredicted RBP13.85□□□□□ -0.19
TUBE1-202ENST00000368662 MSL3Q8N5Y2 521 aaKnown RBP13.85□□□□□ -0.19
TUBE1-202ENST00000368662 CLSTN2Q9H4D0 955 aa13.85□□□□□ -0.19
TUBE1-202ENST00000368662 DISC1Q9NRI5 854 aa13.85□□□□□ -0.19
TUBE1-202ENST00000368662 HOOK1Q9UJC3 728 aaKnown RBP13.85□□□□□ -0.19
TUBE1-202ENST00000368662 VAV3Q9UKW4 847 aa13.85□□□□□ -0.19
TUBE1-202ENST00000368662 ZNFX1Q9P2E3 1918 aaKnown RBP13.85□□□□□ -0.19
TUBE1-202ENST00000368662 KDM3AQ9Y4C1 1321 aa13.85□□□□□ -0.19
TUBE1-202ENST00000368662 SPATA31C2B4DYI2 1134 aa13.85□□□□□ -0.19
TUBE1-202ENST00000368662 TNPO2O14787 897 aaKnown RBP13.85□□□□□ -0.19
TUBE1-202ENST00000368662 COBLO75128 1261 aa13.85□□□□□ -0.19
TUBE1-202ENST00000368662 RGS20O76081 388 aa13.85□□□□□ -0.19
TUBE1-202ENST00000368662 TGFB3P10600 412 aa13.85□□□□□ -0.19
TUBE1-202ENST00000368662 FCGRTP55899 365 aa13.85□□□□□ -0.19
TUBE1-202ENST00000368662 MORN1Q5T089 497 aa13.85□□□□□ -0.19
TUBE1-202ENST00000368662 KCTD17Q8N5Z5 321 aa13.85□□□□□ -0.19
TUBE1-202ENST00000368662 SNX29Q8TEQ0 813 aa13.85□□□□□ -0.19
TUBE1-202ENST00000368662 GJA10Q969M2 543 aa13.85□□□□□ -0.19
TUBE1-202ENST00000368662 CDK5RAP3Q96JB5 506 aa13.85□□□□□ -0.19
TUBE1-202ENST00000368662 NUDT12Q9BQG2 462 aa13.85□□□□□ -0.19
TUBE1-202ENST00000368662 SDF4Q9BRK5 362 aa13.85□□□□□ -0.19
TUBE1-202ENST00000368662 NT5C3AQ9H0P0 336 aa13.85□□□□□ -0.19
TUBE1-202ENST00000368662 TNMDQ9H2S6 317 aa13.85□□□□□ -0.19
TUBE1-202ENST00000368662 CDC25AP30304 524 aa13.84□□□□□ -0.19
TUBE1-202ENST00000368662 MAP2K5Q13163 448 aa13.84□□□□□ -0.19
TUBE1-202ENST00000368662 MAMDC4Q6UXC1 1216 aa13.84□□□□□ -0.19
TUBE1-202ENST00000368662 CEP57L1Q8IYX8 460 aa13.84□□□□□ -0.19
TUBE1-202ENST00000368662 PDILTQ8N807 584 aa13.84□□□□□ -0.19
TUBE1-202ENST00000368662 GIMAP8Q8ND71 665 aaPredicted RBP13.84□□□□□ -0.19
TUBE1-202ENST00000368662 CNNM3Q8NE01 707 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms