RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 NAALADL2Q58DX5 795 aa11.89□□□□□ -0.51
TPM3-212ENST00000368533 CT47A1Q5JQC4 288 aaPredicted RBP11.89□□□□□ -0.51
TPM3-212ENST00000368533 KRT26Q7Z3Y9 468 aa11.89□□□□□ -0.51
TPM3-212ENST00000368533 ATG4CQ96DT6 458 aa11.89□□□□□ -0.51
TPM3-212ENST00000368533 CLMNQ96JQ2 1002 aa11.89□□□□□ -0.51
TPM3-212ENST00000368533 DISC1Q9NRI5 854 aa11.89□□□□□ -0.51
TPM3-212ENST00000368533 JRKLQ9Y4A0 524 aa11.89□□□□□ -0.51
TPM3-212ENST00000368533 CTDP1Q9Y5B0 961 aaPredicted RBP11.89□□□□□ -0.51
TPM3-212ENST00000368533 ESYT2A0FGR8 921 aa11.89□□□□□ -0.51
TPM3-212ENST00000368533 FAM86B1E9PN63 330 aa11.89□□□□□ -0.51
TPM3-212ENST00000368533 MEIS1O00470 390 aa11.89□□□□□ -0.51
TPM3-212ENST00000368533 ZRANB2O95218 330 aaKnown RBP eCLIP11.89□□□□□ -0.51
TPM3-212ENST00000368533 FAM86B2P0C5J1 330 aa11.89□□□□□ -0.51
TPM3-212ENST00000368533 CD44P16070 742 aaKnown RBP11.89□□□□□ -0.51
TPM3-212ENST00000368533 CLK2P49760 499 aaKnown RBP11.89□□□□□ -0.51
TPM3-212ENST00000368533 ETF1P62495 437 aaKnown RBP11.89□□□□□ -0.51
TPM3-212ENST00000368533 CYP4A11Q02928 519 aa11.89□□□□□ -0.51
TPM3-212ENST00000368533 REXO1L1PQ8IX06 675 aa11.89□□□□□ -0.51
TPM3-212ENST00000368533 MLKLQ8NB16 471 aa11.89□□□□□ -0.51
TPM3-212ENST00000368533 UBXN4Q92575 508 aa11.89□□□□□ -0.51
TPM3-212ENST00000368533 BAG1Q99933 345 aaPredicted RBP11.89□□□□□ -0.51
TPM3-212ENST00000368533 FAM237AA0A1B0GTK4 181 aa11.88□□□□□ -0.51
TPM3-212ENST00000368533 PTPRAP18433 802 aa11.88□□□□□ -0.51
TPM3-212ENST00000368533 SMC1AQ14683 1233 aaKnown RBP11.88□□□□□ -0.51
TPM3-212ENST00000368533 ECM1Q16610 540 aa11.88□□□□□ -0.51
TPM3-212ENST00000368533 MUM1L1Q5H9M0 696 aa11.88□□□□□ -0.51
TPM3-212ENST00000368533 KANK3Q6NY19 840 aa11.88□□□□□ -0.51
TPM3-212ENST00000368533 NSMFQ6X4W1 530 aa11.88□□□□□ -0.51
TPM3-212ENST00000368533 SULF1Q8IWU6 871 aa11.88□□□□□ -0.51
TPM3-212ENST00000368533 SNX29Q8TEQ0 813 aa11.88□□□□□ -0.51
TPM3-212ENST00000368533 CHURC1Q8WUH1 139 aa11.88□□□□□ -0.51
TPM3-212ENST00000368533 HAS1Q92839 578 aa11.88□□□□□ -0.51
TPM3-212ENST00000368533 CLEC11AQ9Y240 323 aa11.88□□□□□ -0.51
TPM3-212ENST00000368533 ZSCAN12O43309 604 aa11.88□□□□□ -0.51
TPM3-212ENST00000368533 CTNND1O60716 968 aaKnown RBP11.88□□□□□ -0.51
TPM3-212ENST00000368533 LONP1P36776 959 aaKnown RBP11.88□□□□□ -0.51
TPM3-212ENST00000368533 GNG11P61952 73 aa11.88□□□□□ -0.51
TPM3-212ENST00000368533 PDXDC2PQ6P474 469 aa11.88□□□□□ -0.51
TPM3-212ENST00000368533 KCNK18Q7Z418 384 aa11.88□□□□□ -0.51
TPM3-212ENST00000368533 DCPSQ96C86 337 aaKnown RBP11.88□□□□□ -0.51
TPM3-212ENST00000368533 MMTAG2Q9BU76 263 aaKnown RBP11.88□□□□□ -0.51
TPM3-212ENST00000368533 YY1AP1Q9H869 796 aa11.88□□□□□ -0.51
TPM3-212ENST00000368533 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.88□□□□□ -0.511e-10■■■□□ 17.4
TPM3-212ENST00000368533 DPYDQ12882 1025 aa11.87□□□□□ -0.51
TPM3-212ENST00000368533 MCM6Q14566 821 aa11.87□□□□□ -0.51
TPM3-212ENST00000368533 DCAF15Q66K64 600 aa11.87□□□□□ -0.51
TPM3-212ENST00000368533 ARL6IP4Q66PJ3 421 aaKnown RBP11.87□□□□□ -0.51
TPM3-212ENST00000368533 NCAPH2Q6IBW4 605 aa11.87□□□□□ -0.51
TPM3-212ENST00000368533 APOBEC3FQ8IUX4 373 aaKnown RBP11.87□□□□□ -0.51
TPM3-212ENST00000368533 CDK5RAP3Q96JB5 506 aa11.87□□□□□ -0.51
TPM3-212ENST00000368533 DESI2Q9BSY9 194 aa11.87□□□□□ -0.51
TPM3-212ENST00000368533 ELP3Q9H9T3 547 aa11.87□□□□□ -0.51
TPM3-212ENST00000368533 RIPK3Q9Y572 518 aa11.87□□□□□ -0.51
TPM3-212ENST00000368533 ABCB11O95342 1321 aa11.87□□□□□ -0.51
TPM3-212ENST00000368533 SPECC1LQ69YQ0 1117 aa11.87□□□□□ -0.51
TPM3-212ENST00000368533 SCYL3Q8IZE3 742 aa11.87□□□□□ -0.51
TPM3-212ENST00000368533 OTUD5Q96G74 571 aa11.87□□□□□ -0.51
TPM3-212ENST00000368533 SLF1Q9BQI6 1058 aa11.87□□□□□ -0.51
TPM3-212ENST00000368533 CARD6Q9BX69 1037 aa11.87□□□□□ -0.51
TPM3-212ENST00000368533 SH2D4AQ9H788 454 aa11.87□□□□□ -0.51
TPM3-212ENST00000368533 PCDHA12Q9UN75 941 aa11.87□□□□□ -0.51
TPM3-212ENST00000368533 VGLL4Q14135 290 aa11.86□□□□□ -0.51
TPM3-212ENST00000368533 PPFIBP1Q86W92 1011 aa11.86□□□□□ -0.51
TPM3-212ENST00000368533 KLRG1Q96E93 195 aa11.86□□□□□ -0.51
TPM3-212ENST00000368533 ADAM21Q9UKJ8 722 aa11.86□□□□□ -0.51
TPM3-212ENST00000368533 CTNND2Q9UQB3 1225 aa11.86□□□□□ -0.51
TPM3-212ENST00000368533 ARFGEF1Q9Y6D6 1849 aa11.86□□□□□ -0.51
TPM3-212ENST00000368533 SBF1O95248 1867 aa11.86□□□□□ -0.51
TPM3-212ENST00000368533 hCG_1984214I3L0E3 225 aa11.86□□□□□ -0.51
TPM3-212ENST00000368533 PES1O00541 588 aaKnown RBP11.86□□□□□ -0.51
TPM3-212ENST00000368533 TBC1D8O95759 1140 aa11.86□□□□□ -0.51
TPM3-212ENST00000368533 IDEP14735 1019 aa11.86□□□□□ -0.51
TPM3-212ENST00000368533 ZNF713Q8N859 430 aaPredicted RBP11.86□□□□□ -0.51
TPM3-212ENST00000368533 ZNF280CQ8ND82 737 aa11.86□□□□□ -0.51
TPM3-212ENST00000368533 MTMR9Q96QG7 549 aa11.86□□□□□ -0.51
TPM3-212ENST00000368533 MED15Q96RN5 788 aa11.86□□□□□ -0.51
TPM3-212ENST00000368533 MYCBPQ99417 103 aaPredicted RBP11.86□□□□□ -0.51
TPM3-212ENST00000368533 ZHX3Q9H4I2 956 aa11.86□□□□□ -0.51
TPM3-212ENST00000368533 INTS13Q9NVM9 706 aa11.86□□□□□ -0.51
TPM3-212ENST00000368533 TBC1D7Q9P0N9 293 aa11.86□□□□□ -0.51
TPM3-212ENST00000368533 COL20A1Q9P218 1284 aa11.86□□□□□ -0.51
TPM3-212ENST00000368533 PPP2R2CQ9Y2T4 447 aa11.86□□□□□ -0.51
TPM3-212ENST00000368533 COL2A1P02458 1487 aaPredicted RBP11.86□□□□□ -0.51
TPM3-212ENST00000368533 POTEB3A0JP26 581 aa11.86□□□□□ -0.51
TPM3-212ENST00000368533 TRIM49BA6NDI0 452 aa11.86□□□□□ -0.51
TPM3-212ENST00000368533 POTECB2RU33 542 aa11.86□□□□□ -0.51
TPM3-212ENST00000368533 ARHGAP6O43182 974 aa11.86□□□□□ -0.51
TPM3-212ENST00000368533 EIF2AK2P19525 551 aaKnown RBP11.86□□□□□ -0.51
TPM3-212ENST00000368533 GPS2Q13227 327 aa11.86□□□□□ -0.51
TPM3-212ENST00000368533 MORC3Q14149 939 aa11.86□□□□□ -0.51
TPM3-212ENST00000368533 TMEM266Q2M3C6 531 aa11.86□□□□□ -0.51
TPM3-212ENST00000368533 POTEBQ6S5H4 581 aa11.86□□□□□ -0.51
TPM3-212ENST00000368533 BTNL9Q6UXG8 535 aa11.86□□□□□ -0.51
TPM3-212ENST00000368533 IL31RAQ8NI17 732 aa11.86□□□□□ -0.51
TPM3-212ENST00000368533 ADARB2Q9NS39 739 aaKnown RBP11.86□□□□□ -0.51
TPM3-212ENST00000368533 ATAD5Q96QE3 1844 aa11.85□□□□□ -0.51
TPM3-212ENST00000368533 ZNF536O15090 1300 aa11.85□□□□□ -0.51
TPM3-212ENST00000368533 NPHP3-ACAD11A0A0J9YXS1 232 aa11.85□□□□□ -0.51
TPM3-212ENST00000368533 E9PMD0 336 aa11.85□□□□□ -0.51
TPM3-212ENST00000368533 GCOM1H8Y6P7 765 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms