RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 MMTAG2Q9BU76 263 aaKnown RBP9.38□□□□□ -0.91
SYNE1-206ENST00000367253 POLKQ9UBT6 870 aa9.38□□□□□ -0.91
SYNE1-206ENST00000367253 LSM7Q9UK45 103 aaKnown RBP9.38□□□□□ -0.91
SYNE1-206ENST00000367253 SFI1A8K8P3 1242 aa9.37□□□□□ -0.91
SYNE1-206ENST00000367253 MSCO60682 206 aa9.37□□□□□ -0.91
SYNE1-206ENST00000367253 SYKP43405 635 aa9.37□□□□□ -0.91
SYNE1-206ENST00000367253 POLGP54098 1239 aaPredicted RBP9.37□□□□□ -0.91
SYNE1-206ENST00000367253 HNRNPH2P55795 449 aaKnown RBP9.37□□□□□ -0.91
SYNE1-206ENST00000367253 PSMC1P62191 440 aaKnown RBP9.37□□□□□ -0.91
SYNE1-206ENST00000367253 TYRO3Q06418 890 aa9.37□□□□□ -0.91
SYNE1-206ENST00000367253 RASA3Q14644 834 aa9.37□□□□□ -0.91
SYNE1-206ENST00000367253 E4F1Q66K89 784 aaPredicted RBP9.37□□□□□ -0.91
SYNE1-206ENST00000367253 CLEC4GQ6UXB4 293 aa9.37□□□□□ -0.91
SYNE1-206ENST00000367253 CCDC25Q86WR0 208 aa9.37□□□□□ -0.91
SYNE1-206ENST00000367253 IFNL3Q8IZI9 196 aa9.37□□□□□ -0.91
SYNE1-206ENST00000367253 FAM89AQ96GI7 184 aa9.37□□□□□ -0.91
SYNE1-206ENST00000367253 BRIP1Q9BX63 1249 aa9.37□□□□□ -0.91
SYNE1-206ENST00000367253 SNX25Q9H3E2 840 aa9.37□□□□□ -0.91
SYNE1-206ENST00000367253 DBNDD1Q9H9R9 158 aa9.37□□□□□ -0.91
SYNE1-206ENST00000367253 POLR3EQ9NVU0 708 aa9.37□□□□□ -0.91
SYNE1-206ENST00000367253 FPGT-TNNI3KV9GXZ4 949 aa9.37□□□□□ -0.91
SYNE1-206ENST00000367253 CLTCQ00610 1675 aaKnown RBP9.37□□□□□ -0.91
SYNE1-206ENST00000367253 HNRNPCL2B2RXH8 293 aa9.37□□□□□ -0.91
SYNE1-206ENST00000367253 E7EVH7 732 aa9.37□□□□□ -0.91
SYNE1-206ENST00000367253 HNRNPCL1O60812 293 aaKnown RBP9.37□□□□□ -0.91
SYNE1-206ENST00000367253 MTERF2Q49AM1 385 aa9.37□□□□□ -0.91
SYNE1-206ENST00000367253 SLC45A4Q5BKX6 768 aa9.37□□□□□ -0.91
SYNE1-206ENST00000367253 RASEFQ8IZ41 740 aa9.37□□□□□ -0.91
SYNE1-206ENST00000367253 TRIML2Q8N7C3 387 aa9.37□□□□□ -0.91
SYNE1-206ENST00000367253 ZBTB10Q96DT7 871 aa9.37□□□□□ -0.91
SYNE1-206ENST00000367253 TOPORSQ9NS56 1045 aaPredicted RBP9.37□□□□□ -0.91
SYNE1-206ENST00000367253 CHPF2Q9P2E5 772 aa9.37□□□□□ -0.91
SYNE1-206ENST00000367253 THEGQ9P2T0 379 aa9.37□□□□□ -0.91
SYNE1-206ENST00000367253 GUCA1BQ9UMX6 200 aa9.37□□□□□ -0.91
SYNE1-206ENST00000367253 SPATA31D1Q6ZQQ2 1576 aa9.37□□□□□ -0.91
SYNE1-206ENST00000367253 OPHN1O60890 802 aa9.37□□□□□ -0.91
SYNE1-206ENST00000367253 EPHX2P34913 555 aa9.37□□□□□ -0.91
SYNE1-206ENST00000367253 SCNN1DP51172 638 aa9.37□□□□□ -0.91
SYNE1-206ENST00000367253 APBA1Q02410 837 aa9.37□□□□□ -0.91
SYNE1-206ENST00000367253 LAMB3Q13751 1172 aa9.37□□□□□ -0.91
SYNE1-206ENST00000367253 KARSQ15046 597 aaKnown RBP9.37□□□□□ -0.91
SYNE1-206ENST00000367253 ZNF174Q15697 407 aa9.37□□□□□ -0.91
SYNE1-206ENST00000367253 SESTD1Q86VW0 696 aa9.37□□□□□ -0.91
SYNE1-206ENST00000367253 FBXO11Q86XK2 927 aa9.37□□□□□ -0.91
SYNE1-206ENST00000367253 MIGA1Q8NAN2 632 aa9.37□□□□□ -0.91
SYNE1-206ENST00000367253 RRAGCQ9HB90 399 aa9.37□□□□□ -0.91
SYNE1-206ENST00000367253 LZTFL1Q9NQ48 299 aa9.37□□□□□ -0.91
SYNE1-206ENST00000367253 SEL1LQ9UBV2 794 aa9.37□□□□□ -0.91
SYNE1-206ENST00000367253 SPDYE2BA6NHP3 402 aa9.37□□□□□ -0.91
SYNE1-206ENST00000367253 SPDYE6P0CI01 402 aa9.37□□□□□ -0.91
SYNE1-206ENST00000367253 ZBTB41Q5SVQ8 909 aa9.37□□□□□ -0.91
SYNE1-206ENST00000367253 CHADLQ6NUI6 762 aa9.37□□□□□ -0.91
SYNE1-206ENST00000367253 CCDC24Q8N4L8 307 aa9.37□□□□□ -0.91
SYNE1-206ENST00000367253 AOPEPQ8N6M6 819 aa9.37□□□□□ -0.91
SYNE1-206ENST00000367253 TSC1Q92574 1164 aa9.37□□□□□ -0.91
SYNE1-206ENST00000367253 KANSL2Q9H9L4 492 aa9.37□□□□□ -0.91
SYNE1-206ENST00000367253 ADARB2Q9NS39 739 aaKnown RBP9.37□□□□□ -0.91
SYNE1-206ENST00000367253 TLK1Q9UKI8 766 aa9.37□□□□□ -0.91
SYNE1-206ENST00000367253 ATP11BQ9Y2G3 1177 aa9.37□□□□□ -0.91
SYNE1-206ENST00000367253 PCDHB13Q9Y5F0 798 aa9.37□□□□□ -0.91
SYNE1-206ENST00000367253 ZNF804BA4D1E1 1349 aa9.37□□□□□ -0.91
SYNE1-206ENST00000367253 CLTAP09496 248 aa9.36□□□□□ -0.91
SYNE1-206ENST00000367253 MAPKAPK5Q8IW41 473 aa9.36□□□□□ -0.91
SYNE1-206ENST00000367253 MMP19Q99542 508 aa9.36□□□□□ -0.91
SYNE1-206ENST00000367253 Q9H521 79 aa9.36□□□□□ -0.91
SYNE1-206ENST00000367253 ETAA1Q9NY74 926 aa9.36□□□□□ -0.91
SYNE1-206ENST00000367253 ATP7BP35670 1465 aa9.36□□□□□ -0.91
SYNE1-206ENST00000367253 EYA2O00167 538 aa9.36□□□□□ -0.91
SYNE1-206ENST00000367253 OAS2P29728 719 aaKnown RBP9.36□□□□□ -0.91
SYNE1-206ENST00000367253 POSTNQ15063 836 aa9.36□□□□□ -0.91
SYNE1-206ENST00000367253 AKNAD1Q5T1N1 836 aa9.36□□□□□ -0.91
SYNE1-206ENST00000367253 FBXW10Q5XX13 1052 aa9.36□□□□□ -0.91
SYNE1-206ENST00000367253 NFRKBQ6P4R8 1299 aa9.36□□□□□ -0.91
SYNE1-206ENST00000367253 GPR161Q8N6U8 529 aaKnown RBP9.36□□□□□ -0.91
SYNE1-206ENST00000367253 THUMPD2Q9BTF0 503 aaKnown RBP9.36□□□□□ -0.91
SYNE1-206ENST00000367253 PI4KBQ9UBF8 816 aa9.36□□□□□ -0.91
SYNE1-206ENST00000367253 HCN4Q9Y3Q4 1203 aa9.36□□□□□ -0.91
SYNE1-206ENST00000367253 IL16Q14005 1332 aa9.36□□□□□ -0.91
SYNE1-206ENST00000367253 KIAA1210Q9ULL0 1709 aa9.36□□□□□ -0.91
SYNE1-206ENST00000367253 MROH1Q8NDA8 1641 aa9.36□□□□□ -0.91
SYNE1-206ENST00000367253 PSMA7O14818 248 aa9.36□□□□□ -0.91
SYNE1-206ENST00000367253 TMEM191BP0C7N4 346 aa9.36□□□□□ -0.91
SYNE1-206ENST00000367253 GCLCP48506 637 aaPredicted RBP9.36□□□□□ -0.91
SYNE1-206ENST00000367253 TCP11Q8WWU5 503 aa9.36□□□□□ -0.91
SYNE1-206ENST00000367253 ALG1Q9BT22 464 aa9.36□□□□□ -0.91
SYNE1-206ENST00000367253 ZHX2Q9Y6X8 837 aa9.36□□□□□ -0.91
SYNE1-206ENST00000367253 MAN1A2O60476 641 aa9.36□□□□□ -0.91
SYNE1-206ENST00000367253 EPB41P11171 864 aaKnown RBP9.36□□□□□ -0.91
SYNE1-206ENST00000367253 KRT4P19013 534 aa9.36□□□□□ -0.91
SYNE1-206ENST00000367253 FBXW4P57775 412 aa9.36□□□□□ -0.91
SYNE1-206ENST00000367253 CYP4A11Q02928 519 aa9.36□□□□□ -0.91
SYNE1-206ENST00000367253 TMEM110Q86TL2 294 aa9.36□□□□□ -0.91
SYNE1-206ENST00000367253 TRIM74Q86UV6 250 aa9.36□□□□□ -0.91
SYNE1-206ENST00000367253 TRIM73Q86UV7 250 aa9.36□□□□□ -0.91
SYNE1-206ENST00000367253 DTNBP1Q96EV8 351 aa9.36□□□□□ -0.91
SYNE1-206ENST00000367253 DNAJC25Q9H1X3 360 aa9.36□□□□□ -0.91
SYNE1-206ENST00000367253 GMEB1Q9Y692 573 aa9.36□□□□□ -0.91
SYNE1-206ENST00000367253 ALKQ9UM73 1620 aa9.36□□□□□ -0.91
SYNE1-206ENST00000367253 NRXN1Q9ULB1 1477 aa9.36□□□□□ -0.91
SYNE1-206ENST00000367253 ZSCAN22P10073 491 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms