RNA–Protein interactions for RNA: ENST00000367251.7

SYNE1-205, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 5,837 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-205ENST00000367251 PPIP5K2O43314 1243 aa9.81□□□□□ -0.84
SYNE1-205ENST00000367251 ATF2P15336 505 aa9.81□□□□□ -0.84
SYNE1-205ENST00000367251 HSPA1LP34931 641 aa9.81□□□□□ -0.84
SYNE1-205ENST00000367251 EIF3BP55884 814 aaKnown RBP9.81□□□□□ -0.84
SYNE1-205ENST00000367251 TCP10Q12799 353 aa9.81□□□□□ -0.84
SYNE1-205ENST00000367251 RASGRF1Q13972 1273 aa9.81□□□□□ -0.84
SYNE1-205ENST00000367251 NAA25Q14CX7 972 aa9.81□□□□□ -0.84
SYNE1-205ENST00000367251 USPL1Q5W0Q7 1092 aa9.81□□□□□ -0.84
SYNE1-205ENST00000367251 EMBQ6PCB8 327 aa9.81□□□□□ -0.84
SYNE1-205ENST00000367251 NLGN1Q8N2Q7 840 aa9.81□□□□□ -0.84
SYNE1-205ENST00000367251 RSAD2Q8WXG1 361 aa9.81□□□□□ -0.84
SYNE1-205ENST00000367251 FTOQ9C0B1 505 aaKnown RBP eCLIP9.81□□□□□ -0.84
SYNE1-205ENST00000367251 TNNC2P02585 160 aa9.81□□□□□ -0.84
SYNE1-205ENST00000367251 PCK1P35558 622 aa9.81□□□□□ -0.84
SYNE1-205ENST00000367251 ADCY8P40145 1251 aa9.81□□□□□ -0.84
SYNE1-205ENST00000367251 MCAMP43121 646 aa9.81□□□□□ -0.84
SYNE1-205ENST00000367251 CLCN6P51797 869 aa9.81□□□□□ -0.84
SYNE1-205ENST00000367251 GUCY2DQ02846 1103 aa9.81□□□□□ -0.84
SYNE1-205ENST00000367251 RNASELQ05823 741 aaKnown RBP9.81□□□□□ -0.84
SYNE1-205ENST00000367251 CUL1Q13616 776 aa9.81□□□□□ -0.84
SYNE1-205ENST00000367251 GADL1Q6ZQY3 521 aa9.81□□□□□ -0.84
SYNE1-205ENST00000367251 PPANQ9NQ55 473 aaKnown RBP9.81□□□□□ -0.84
SYNE1-205ENST00000367251 LCMT1Q9UIC8 334 aa9.81□□□□□ -0.84
SYNE1-205ENST00000367251 USP21Q9UK80 565 aa9.81□□□□□ -0.84
SYNE1-205ENST00000367251 PCDHA13Q9Y5I0 950 aa9.81□□□□□ -0.84
SYNE1-205ENST00000367251 USH1CQ9Y6N9 552 aa9.81□□□□□ -0.84
SYNE1-205ENST00000367251 PNMA6FA0A0J9YX94 578 aa9.8□□□□□ -0.84
SYNE1-205ENST00000367251 NR5A1Q13285 461 aa9.8□□□□□ -0.84
SYNE1-205ENST00000367251 AP3B2Q13367 1082 aa9.8□□□□□ -0.84
SYNE1-205ENST00000367251 KRT31Q15323 416 aa9.8□□□□□ -0.84
SYNE1-205ENST00000367251 RABL6Q3YEC7 729 aaPredicted RBP9.8□□□□□ -0.84
SYNE1-205ENST00000367251 ANKRD20A3Q5VUR7 823 aa9.8□□□□□ -0.84
SYNE1-205ENST00000367251 SGMS1Q86VZ5 419 aa9.8□□□□□ -0.84
SYNE1-205ENST00000367251 SOWAHDA6NJG2 315 aa9.8□□□□□ -0.84
SYNE1-205ENST00000367251 STAM2O75886 525 aa9.8□□□□□ -0.84
SYNE1-205ENST00000367251 ABCB4P21439 1286 aa9.8□□□□□ -0.84
SYNE1-205ENST00000367251 DYNLL1P63167 89 aaKnown RBP9.8□□□□□ -0.84
SYNE1-205ENST00000367251 SEPT6Q14141 434 aa9.8□□□□□ -0.84
SYNE1-205ENST00000367251 PFKFB3Q16875 520 aaPredicted RBP9.8□□□□□ -0.84
SYNE1-205ENST00000367251 RNF10Q8N5U6 811 aaKnown RBP9.8□□□□□ -0.84
SYNE1-205ENST00000367251 PLA2G12BQ9BX93 195 aa9.8□□□□□ -0.84
SYNE1-205ENST00000367251 MYO3AQ8NEV4 1616 aa9.8□□□□□ -0.84
SYNE1-205ENST00000367251 PVALEFA0A1B0GWK0 134 aa9.8□□□□□ -0.84
SYNE1-205ENST00000367251 TRIM28Q13263 835 aaKnown RBP9.8□□□□□ -0.84
SYNE1-205ENST00000367251 MAP7Q14244 749 aa9.8□□□□□ -0.84
SYNE1-205ENST00000367251 XKR9Q5GH70 373 aa9.8□□□□□ -0.84
SYNE1-205ENST00000367251 MAEAQ7L5Y9 396 aa9.8□□□□□ -0.84
SYNE1-205ENST00000367251 CCDC13Q8IYE1 715 aa9.8□□□□□ -0.84
SYNE1-205ENST00000367251 METTL13Q8N6R0 699 aa9.8□□□□□ -0.84
SYNE1-205ENST00000367251 SPDYE1Q8NFV5 336 aaPredicted RBP9.8□□□□□ -0.84
SYNE1-205ENST00000367251 NT5C1BQ96P26 610 aa9.8□□□□□ -0.84
SYNE1-205ENST00000367251 PPEF1O14829 653 aaPredicted RBP9.8□□□□□ -0.84
SYNE1-205ENST00000367251 CD19P15391 556 aa9.8□□□□□ -0.84
SYNE1-205ENST00000367251 ZNF131P52739 623 aa9.8□□□□□ -0.84
SYNE1-205ENST00000367251 PTK2Q05397 1052 aa9.8□□□□□ -0.84
SYNE1-205ENST00000367251 EHHADHQ08426 723 aa9.8□□□□□ -0.84
SYNE1-205ENST00000367251 SLMAPQ14BN4 828 aa9.8□□□□□ -0.84
SYNE1-205ENST00000367251 PALM2Q8IXS6 379 aa9.8□□□□□ -0.84
SYNE1-205ENST00000367251 FAM186BQ8IYM0 893 aa9.8□□□□□ -0.84
SYNE1-205ENST00000367251 KRT12Q99456 494 aa9.8□□□□□ -0.84
SYNE1-205ENST00000367251 IFT122Q9HBG6 1241 aa9.8□□□□□ -0.84
SYNE1-205ENST00000367251 TMEM232C9JQI7 657 aa9.8□□□□□ -0.84
SYNE1-205ENST00000367251 PRKAB2O43741 272 aa9.8□□□□□ -0.84
SYNE1-205ENST00000367251 EVI5O60447 810 aa9.8□□□□□ -0.84
SYNE1-205ENST00000367251 LRCH2Q5VUJ6 765 aa9.8□□□□□ -0.84
SYNE1-205ENST00000367251 ZNF449Q6P9G9 518 aa9.8□□□□□ -0.84
SYNE1-205ENST00000367251 UNC13DQ70J99 1090 aa9.8□□□□□ -0.84
SYNE1-205ENST00000367251 MED10Q9BTT4 135 aa9.8□□□□□ -0.84
SYNE1-205ENST00000367251 ISCA1Q9BUE6 129 aa9.8□□□□□ -0.84
SYNE1-205ENST00000367251 NDST4Q9H3R1 872 aa9.8□□□□□ -0.84
SYNE1-205ENST00000367251 NRBP2Q9NSY0 501 aa9.8□□□□□ -0.84
SYNE1-205ENST00000367251 CAPN7Q9Y6W3 813 aa9.8□□□□□ -0.84
SYNE1-205ENST00000367251 SPATA31A3Q5VYP0 1347 aa9.79□□□□□ -0.84
SYNE1-205ENST00000367251 HMGB1P1B2RPK0 211 aaPredicted RBP9.79□□□□□ -0.84
SYNE1-205ENST00000367251 NSFP46459 744 aaKnown RBP9.79□□□□□ -0.84
SYNE1-205ENST00000367251 KIF11P52732 1056 aa9.79□□□□□ -0.84
SYNE1-205ENST00000367251 CLNS1AP54105 237 aaKnown RBP9.79□□□□□ -0.84
SYNE1-205ENST00000367251 ERFEQ4G0M1 354 aa9.79□□□□□ -0.84
SYNE1-205ENST00000367251 ACBD5Q5T8D3 534 aaPredicted RBP9.79□□□□□ -0.84
SYNE1-205ENST00000367251 PNPLA7Q6ZV29 1317 aa9.79□□□□□ -0.84
SYNE1-205ENST00000367251 LGALS16A8MUM7 142 aa9.79□□□□□ -0.84
SYNE1-205ENST00000367251 CCDC188H7C350 402 aa9.79□□□□□ -0.84
SYNE1-205ENST00000367251 FAM160B1Q5W0V3 765 aa9.79□□□□□ -0.84
SYNE1-205ENST00000367251 PDZD4Q76G19 769 aaPredicted RBP9.79□□□□□ -0.84
SYNE1-205ENST00000367251 ATP6V0A1Q93050 837 aa9.79□□□□□ -0.84
SYNE1-205ENST00000367251 MLXIPQ9HAP2 919 aa9.79□□□□□ -0.84
SYNE1-205ENST00000367251 KIF9Q9HAQ2 790 aa9.79□□□□□ -0.84
SYNE1-205ENST00000367251 TYW5A2RUC4 315 aaKnown RBP9.79□□□□□ -0.84
SYNE1-205ENST00000367251 HEXIM1O94992 359 aaKnown RBP9.79□□□□□ -0.84
SYNE1-205ENST00000367251 ATF7P17544 494 aaPredicted RBP9.79□□□□□ -0.84
SYNE1-205ENST00000367251 PLCG1P19174 1290 aa9.79□□□□□ -0.84
SYNE1-205ENST00000367251 ODR4Q5SWX8 454 aa9.79□□□□□ -0.84
SYNE1-205ENST00000367251 ZNF512BQ96KM6 892 aaPredicted RBP9.79□□□□□ -0.84
SYNE1-205ENST00000367251 GOLPH3LQ9H4A5 285 aa9.79□□□□□ -0.84
SYNE1-205ENST00000367251 SEC31BQ9NQW1 1179 aa9.79□□□□□ -0.84
SYNE1-205ENST00000367251 EMILIN3Q9NT22 766 aa9.79□□□□□ -0.84
SYNE1-205ENST00000367251 DAAM1Q9Y4D1 1078 aa9.79□□□□□ -0.84
SYNE1-205ENST00000367251 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.79□□□□□ -0.84
SYNE1-205ENST00000367251 GRAPQ13588 217 aa9.79□□□□□ -0.84
SYNE1-205ENST00000367251 PNMA8AQ86V59 439 aaPredicted RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms