RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 CCDC69A6NI79 296 aa17.13■□□□□ 0.33
CTSD-202ENST00000367196 GGPS1O95749 300 aa17.13■□□□□ 0.33
CTSD-202ENST00000367196 ZNF286BP0CG31 522 aa17.13■□□□□ 0.33
CTSD-202ENST00000367196 CALM1P0DP23 149 aa17.13■□□□□ 0.33
CTSD-202ENST00000367196 CALM2P0DP24 149 aa17.13■□□□□ 0.33
CTSD-202ENST00000367196 CALM3P0DP25 149 aa17.13■□□□□ 0.33
CTSD-202ENST00000367196 UBA1P22314 1058 aaKnown RBP17.13■□□□□ 0.33
CTSD-202ENST00000367196 IGFBP4P22692 258 aa17.13■□□□□ 0.33
CTSD-202ENST00000367196 RABGGTBP53611 331 aa17.13■□□□□ 0.33
CTSD-202ENST00000367196 ANTXR2P58335 489 aa17.13■□□□□ 0.33
CTSD-202ENST00000367196 PTK7Q13308 1070 aa17.13■□□□□ 0.33
CTSD-202ENST00000367196 NFXL1Q6ZNB6 911 aa17.13■□□□□ 0.33
CTSD-202ENST00000367196 PPP1R13LQ8WUF5 828 aa17.13■□□□□ 0.33
CTSD-202ENST00000367196 VWCEQ96DN2 955 aa17.13■□□□□ 0.33
CTSD-202ENST00000367196 ALG1Q9BT22 464 aa17.13■□□□□ 0.33
CTSD-202ENST00000367196 LY9Q9HBG7 655 aa17.13■□□□□ 0.33
CTSD-202ENST00000367196 SENP2Q9HC62 589 aa17.13■□□□□ 0.33
CTSD-202ENST00000367196 HDAC6Q9UBN7 1215 aa17.13■□□□□ 0.33
CTSD-202ENST00000367196 VCANP13611 3396 aa17.13■□□□□ 0.33
CTSD-202ENST00000367196 FRMPD4Q14CM0 1322 aa17.13■□□□□ 0.33
CTSD-202ENST00000367196 HAS3O00219 553 aa17.12■□□□□ 0.33
CTSD-202ENST00000367196 NOP56O00567 594 aaKnown RBP17.12■□□□□ 0.33
CTSD-202ENST00000367196 PRC1O43663 620 aa17.12■□□□□ 0.33
CTSD-202ENST00000367196 EFCAB14O75071 495 aa17.12■□□□□ 0.33
CTSD-202ENST00000367196 RGS20O76081 388 aa17.12■□□□□ 0.33
CTSD-202ENST00000367196 NEDD9Q14511 834 aa17.12■□□□□ 0.33
CTSD-202ENST00000367196 TJAP1Q5JTD0 557 aa17.12■□□□□ 0.33
CTSD-202ENST00000367196 SMARCC2Q8TAQ2 1214 aa17.12■□□□□ 0.33
CTSD-202ENST00000367196 TSPYL2Q9H2G4 693 aaPredicted RBP17.12■□□□□ 0.33
CTSD-202ENST00000367196 TAF6LQ9Y6J9 622 aa17.12■□□□□ 0.33
CTSD-202ENST00000367196 LIFRP42702 1097 aa17.11■□□□□ 0.33
CTSD-202ENST00000367196 SLC35G1Q2M3R5 365 aa17.11■□□□□ 0.33
CTSD-202ENST00000367196 HSDL1Q3SXM5 330 aa17.11■□□□□ 0.33
CTSD-202ENST00000367196 RNF20Q5VTR2 975 aa17.11■□□□□ 0.33
CTSD-202ENST00000367196 XRRA1Q6P2D8 792 aa17.11■□□□□ 0.33
CTSD-202ENST00000367196 CNKSR3Q6P9H4 555 aa17.11■□□□□ 0.33
CTSD-202ENST00000367196 USP38Q8NB14 1042 aa17.11■□□□□ 0.33
CTSD-202ENST00000367196 IL31RAQ8NI17 732 aa17.11■□□□□ 0.33
CTSD-202ENST00000367196 PIBF1Q8WXW3 757 aa17.11■□□□□ 0.33
CTSD-202ENST00000367196 THEGQ9P2T0 379 aa17.11■□□□□ 0.33
CTSD-202ENST00000367196 PIK3CDO00329 1044 aa17.1■□□□□ 0.33
CTSD-202ENST00000367196 FIBPO43427 364 aa17.1■□□□□ 0.33
CTSD-202ENST00000367196 CA3P07451 260 aa17.1■□□□□ 0.33
CTSD-202ENST00000367196 CKBP12277 381 aa17.1■□□□□ 0.33
CTSD-202ENST00000367196 ICAM3P32942 547 aa17.1■□□□□ 0.33
CTSD-202ENST00000367196 METTL7BQ6UX53 244 aa17.1■□□□□ 0.33
CTSD-202ENST00000367196 HERC6Q8IVU3 1022 aa17.1■□□□□ 0.33
CTSD-202ENST00000367196 ATXN2LQ8WWM7 1075 aaKnown RBP17.1■□□□□ 0.33
CTSD-202ENST00000367196 PPM1EQ8WY54 764 aa17.1■□□□□ 0.33
CTSD-202ENST00000367196 INPP4AQ96PE3 977 aaPredicted RBP17.1■□□□□ 0.33
CTSD-202ENST00000367196 CTAGE1Q96RT6 745 aa17.1■□□□□ 0.33
CTSD-202ENST00000367196 ESYT1Q9BSJ8 1104 aa17.1■□□□□ 0.33
CTSD-202ENST00000367196 USP26Q9BXU7 913 aa17.1■□□□□ 0.33
CTSD-202ENST00000367196 LSG1Q9H089 658 aaKnown RBP17.1■□□□□ 0.33
CTSD-202ENST00000367196 ANO2Q9NQ90 1003 aa17.1■□□□□ 0.33
CTSD-202ENST00000367196 PRUNE2Q8WUY3 3088 aa17.1■□□□□ 0.33
CTSD-202ENST00000367196 EMSYQ7Z589 1322 aa17.1■□□□□ 0.33
CTSD-202ENST00000367196 TET1Q8NFU7 2136 aa17.09■□□□□ 0.33
CTSD-202ENST00000367196 SH2B2O14492 632 aaPredicted RBP17.09■□□□□ 0.33
CTSD-202ENST00000367196 GTPBP6O43824 516 aaPredicted RBP17.09■□□□□ 0.33
CTSD-202ENST00000367196 CXCL10P02778 98 aa17.09■□□□□ 0.33
CTSD-202ENST00000367196 MYOGP15173 224 aa17.09■□□□□ 0.33
CTSD-202ENST00000367196 NLRX1Q86UT6 975 aa17.09■□□□□ 0.33
CTSD-202ENST00000367196 GIMAP8Q8ND71 665 aaPredicted RBP17.09■□□□□ 0.33
CTSD-202ENST00000367196 DHX38Q92620 1227 aaKnown RBP17.09■□□□□ 0.33
CTSD-202ENST00000367196 MYL10Q9BUA6 226 aa17.09■□□□□ 0.33
CTSD-202ENST00000367196 ZNF215Q9UL58 517 aaPredicted RBP17.09■□□□□ 0.33
CTSD-202ENST00000367196 SLC12A7Q9Y666 1083 aa17.09■□□□□ 0.33
CTSD-202ENST00000367196 ABHD14A-ACY1A0A1B0GW23 586 aa17.08■□□□□ 0.32
CTSD-202ENST00000367196 C17orf102A2RUQ5 167 aa17.08■□□□□ 0.32
CTSD-202ENST00000367196 H3BRB1 525 aa17.08■□□□□ 0.32
CTSD-202ENST00000367196 SLC27A2O14975 620 aa17.08■□□□□ 0.32
CTSD-202ENST00000367196 TLL1O43897 1013 aa17.08■□□□□ 0.32
CTSD-202ENST00000367196 SORBS3O60504 671 aa17.08■□□□□ 0.32
CTSD-202ENST00000367196 GNAT1P11488 350 aa17.08■□□□□ 0.32
CTSD-202ENST00000367196 WDR5P61964 334 aaKnown RBP17.08■□□□□ 0.32
CTSD-202ENST00000367196 SP2Q02086 613 aa17.08■□□□□ 0.32
CTSD-202ENST00000367196 ADGRE1Q14246 886 aa17.08■□□□□ 0.32
CTSD-202ENST00000367196 PCNX4Q63HM2 1172 aa17.08■□□□□ 0.32
CTSD-202ENST00000367196 CREB3L3Q68CJ9 461 aa17.08■□□□□ 0.32
CTSD-202ENST00000367196 SYNE3Q6ZMZ3 975 aa17.08■□□□□ 0.32
CTSD-202ENST00000367196 IL27Q8NEV9 243 aa17.08■□□□□ 0.32
CTSD-202ENST00000367196 CDHR1Q96JP9 859 aa17.08■□□□□ 0.32
CTSD-202ENST00000367196 TUT1Q9H6E5 874 aaKnown RBP17.08■□□□□ 0.32
CTSD-202ENST00000367196 TTC28Q96AY4 2481 aa17.07■□□□□ 0.32
CTSD-202ENST00000367196 SPATA31C2B4DYI2 1134 aa17.07■□□□□ 0.32
CTSD-202ENST00000367196 CAND2O75155 1236 aa17.07■□□□□ 0.32
CTSD-202ENST00000367196 LGALS2P05162 132 aa17.07■□□□□ 0.32
CTSD-202ENST00000367196 MRPS9P82933 396 aaKnown RBP17.07■□□□□ 0.32
CTSD-202ENST00000367196 IKBKEQ14164 716 aa17.07■□□□□ 0.32
CTSD-202ENST00000367196 BMP2KLQ5H9B9 411 aa17.07■□□□□ 0.32
CTSD-202ENST00000367196 SERINC5Q86VE9 423 aa17.07■□□□□ 0.32
CTSD-202ENST00000367196 SENP7Q9BQF6 1050 aa17.07■□□□□ 0.32
CTSD-202ENST00000367196 C16orf70Q9BSU1 422 aa17.07■□□□□ 0.32
CTSD-202ENST00000367196 ZBED2Q9BTP6 218 aa17.07■□□□□ 0.32
CTSD-202ENST00000367196 EHMT1Q9H9B1 1298 aa17.07■□□□□ 0.32
CTSD-202ENST00000367196 CHD9Q3L8U1 2897 aa17.06■□□□□ 0.32
CTSD-202ENST00000367196 NBNO60934 754 aa17.06■□□□□ 0.32
CTSD-202ENST00000367196 MRPS5P82675 430 aaKnown RBP17.06■□□□□ 0.32
CTSD-202ENST00000367196 NECTIN1Q15223 517 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms