RNA–Protein interactions for RNA: ENST00000366892.5

PRKN-202, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-202ENST00000366892 FAM109BQ6ICB4 259 aaPredicted RBP19.44■□□□□ 0.7
PRKN-202ENST00000366892 PPTC7Q8NI37 304 aa19.44■□□□□ 0.7
PRKN-202ENST00000366892 WNT8AQ9H1J5 351 aa19.44■□□□□ 0.7
PRKN-202ENST00000366892 MTMR10Q9NXD2 777 aa19.44■□□□□ 0.7
PRKN-202ENST00000366892 RTEL1Q9NZ71 1219 aa19.44■□□□□ 0.7
PRKN-202ENST00000366892 EPB41L2O43491 1005 aaKnown RBP19.43■□□□□ 0.7
PRKN-202ENST00000366892 SORBS3O60504 671 aa19.43■□□□□ 0.7
PRKN-202ENST00000366892 STAM2O75886 525 aa19.43■□□□□ 0.7
PRKN-202ENST00000366892 GGPS1O95749 300 aa19.43■□□□□ 0.7
PRKN-202ENST00000366892 UBA1P22314 1058 aaKnown RBP19.43■□□□□ 0.7
PRKN-202ENST00000366892 SMAD3P84022 425 aaKnown RBP19.43■□□□□ 0.7
PRKN-202ENST00000366892 FGD1P98174 961 aa19.43■□□□□ 0.7
PRKN-202ENST00000366892 HSDL1Q3SXM5 330 aa19.43■□□□□ 0.7
PRKN-202ENST00000366892 Q6ZUG5 572 aa19.43■□□□□ 0.7
PRKN-202ENST00000366892 INPP4AQ96PE3 977 aaPredicted RBP19.43■□□□□ 0.7
PRKN-202ENST00000366892 IL23AQ9NPF7 189 aa19.43■□□□□ 0.7
PRKN-202ENST00000366892 FAM217BQ9NTX9 383 aaPredicted RBP19.43■□□□□ 0.7
PRKN-202ENST00000366892 SPATA31C2B4DYI2 1134 aa19.42■□□□□ 0.7
PRKN-202ENST00000366892 PPFIA4O75335 1185 aa19.42■□□□□ 0.7
PRKN-202ENST00000366892 ICAM3P32942 547 aa19.42■□□□□ 0.7
PRKN-202ENST00000366892 GNPTABQ3T906 1256 aa19.42■□□□□ 0.7
PRKN-202ENST00000366892 ZNF365Q70YC5 407 aa19.42■□□□□ 0.7
PRKN-202ENST00000366892 HEATR3Q7Z4Q2 680 aa19.42■□□□□ 0.7
PRKN-202ENST00000366892 SPATA33Q96N06 139 aa19.42■□□□□ 0.7
PRKN-202ENST00000366892 BCAS3Q9H6U6 928 aa19.42■□□□□ 0.7
PRKN-202ENST00000366892 V9GY48 417 aaPredicted RBP19.42■□□□□ 0.7
PRKN-202ENST00000366892 CNTNAP5Q8WYK1 1306 aa19.42■□□□□ 0.7
PRKN-202ENST00000366892 GOLGA8AA7E2F4 631 aa19.41■□□□□ 0.7
PRKN-202ENST00000366892 GOLGA8BA8MQT2 603 aa19.41■□□□□ 0.7
PRKN-202ENST00000366892 HOXD8P13378 290 aaPredicted RBP19.41■□□□□ 0.7
PRKN-202ENST00000366892 CDC27P30260 824 aa19.41■□□□□ 0.7
PRKN-202ENST00000366892 RCAN1P53805 252 aa19.41■□□□□ 0.7
PRKN-202ENST00000366892 PCNX4Q63HM2 1172 aa19.41■□□□□ 0.7
PRKN-202ENST00000366892 PSRC1Q6PGN9 363 aaPredicted RBP19.41■□□□□ 0.7
PRKN-202ENST00000366892 BLOC1S2Q6QNY1 142 aa19.41■□□□□ 0.7
PRKN-202ENST00000366892 SESTD1Q86VW0 696 aa19.41■□□□□ 0.7
PRKN-202ENST00000366892 MLXIPQ9HAP2 919 aa19.41■□□□□ 0.7
PRKN-202ENST00000366892 ADD1P35611 737 aaKnown RBP19.41■□□□□ 0.7
PRKN-202ENST00000366892 APOBRQ0VD83 1088 aa19.41■□□□□ 0.7
PRKN-202ENST00000366892 SEMA3FQ13275 785 aa19.41■□□□□ 0.7
PRKN-202ENST00000366892 RASIP1Q5U651 963 aa19.41■□□□□ 0.7
PRKN-202ENST00000366892 WWC2Q6AWC2 1192 aa19.41■□□□□ 0.7
PRKN-202ENST00000366892 XRRA1Q6P2D8 792 aa19.41■□□□□ 0.7
PRKN-202ENST00000366892 FBXL16Q8N461 479 aa19.41■□□□□ 0.7
PRKN-202ENST00000366892 SCLYQ96I15 445 aa19.41■□□□□ 0.7
PRKN-202ENST00000366892 NAP1L2Q9ULW6 460 aaPredicted RBP19.41■□□□□ 0.7
PRKN-202ENST00000366892 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.4■□□□□ 0.7
PRKN-202ENST00000366892 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.4■□□□□ 0.7
PRKN-202ENST00000366892 FIBPO43427 364 aa19.4■□□□□ 0.7
PRKN-202ENST00000366892 F2P00734 622 aa19.4■□□□□ 0.7
PRKN-202ENST00000366892 ZNF286BP0CG31 522 aa19.4■□□□□ 0.7
PRKN-202ENST00000366892 RPS6KB1P23443 525 aa19.4■□□□□ 0.7
PRKN-202ENST00000366892 PSEN2P49810 448 aa19.4■□□□□ 0.7
PRKN-202ENST00000366892 PTGISQ16647 500 aa19.4■□□□□ 0.7
PRKN-202ENST00000366892 UBE2SQ16763 222 aa19.4■□□□□ 0.7
PRKN-202ENST00000366892 GDF6Q6KF10 455 aaPredicted RBP19.4■□□□□ 0.7
PRKN-202ENST00000366892 TYW1BQ6NUM6 668 aa19.4■□□□□ 0.7
PRKN-202ENST00000366892 BRF1Q92994 677 aa19.4■□□□□ 0.7
PRKN-202ENST00000366892 VWCEQ96DN2 955 aa19.4■□□□□ 0.7
PRKN-202ENST00000366892 FAM161BQ96MY7 647 aa19.4■□□□□ 0.7
PRKN-202ENST00000366892 NOD1Q9Y239 953 aa19.4■□□□□ 0.7
PRKN-202ENST00000366892 A0A0C4DFX4 3053 aa19.4■□□□□ 0.7
PRKN-202ENST00000366892 HAS3O00219 553 aa19.39■□□□□ 0.69
PRKN-202ENST00000366892 FGBP02675 491 aa19.39■□□□□ 0.69
PRKN-202ENST00000366892 PSMA5P28066 241 aa19.39■□□□□ 0.69
PRKN-202ENST00000366892 METAP2P50579 478 aaKnown RBP eCLIP19.39■□□□□ 0.69
PRKN-202ENST00000366892 NEDD9Q14511 834 aa19.39■□□□□ 0.69
PRKN-202ENST00000366892 MFSD10Q14728 455 aa19.39■□□□□ 0.69
PRKN-202ENST00000366892 NFKBIBQ15653 356 aa19.39■□□□□ 0.69
PRKN-202ENST00000366892 KIAA0753Q2KHM9 967 aa19.39■□□□□ 0.69
PRKN-202ENST00000366892 ZNF697Q5TEC3 545 aa19.39■□□□□ 0.69
PRKN-202ENST00000366892 RPUSD2Q8IZ73 545 aaKnown RBP19.39■□□□□ 0.69
PRKN-202ENST00000366892 C7orf31Q8N865 590 aa19.39■□□□□ 0.69
PRKN-202ENST00000366892 CTAGE1Q96RT6 745 aa19.39■□□□□ 0.69
PRKN-202ENST00000366892 ALG1Q9BT22 464 aa19.39■□□□□ 0.69
PRKN-202ENST00000366892 KATNAL1Q9BW62 490 aa19.39■□□□□ 0.69
PRKN-202ENST00000366892 USP26Q9BXU7 913 aa19.39■□□□□ 0.69
PRKN-202ENST00000366892 AGXT2Q9BYV1 514 aa19.39■□□□□ 0.69
PRKN-202ENST00000366892 HDAC6Q9UBN7 1215 aa19.39■□□□□ 0.69
PRKN-202ENST00000366892 SPDYE3A6NKU9 549 aa19.38■□□□□ 0.69
PRKN-202ENST00000366892 NAPAP54920 295 aa19.38■□□□□ 0.69
PRKN-202ENST00000366892 RABEP1Q15276 862 aa19.38■□□□□ 0.69
PRKN-202ENST00000366892 CYFIP1Q7L576 1253 aa19.38■□□□□ 0.69
PRKN-202ENST00000366892 HERVK_113Q902F9 699 aa19.38■□□□□ 0.69
PRKN-202ENST00000366892 C16orf70Q9BSU1 422 aa19.38■□□□□ 0.69
PRKN-202ENST00000366892 SEMA6BQ9H3T3 888 aa19.38■□□□□ 0.69
PRKN-202ENST00000366892 GTF2IRD1Q9UHL9 959 aa19.38■□□□□ 0.69
PRKN-202ENST00000366892 PCDHA6Q9UN73 950 aa19.38■□□□□ 0.69
PRKN-202ENST00000366892 PCDHA8Q9Y5H6 950 aa19.38■□□□□ 0.69
PRKN-202ENST00000366892 CCDC196A0A1B0GTZ2 297 aa19.37■□□□□ 0.69
PRKN-202ENST00000366892 PITPNM1O00562 1244 aa19.37■□□□□ 0.69
PRKN-202ENST00000366892 METTL7BQ6UX53 244 aa19.37■□□□□ 0.69
PRKN-202ENST00000366892 OTOP2Q7RTS6 562 aa19.37■□□□□ 0.69
PRKN-202ENST00000366892 NLRX1Q86UT6 975 aa19.37■□□□□ 0.69
PRKN-202ENST00000366892 SENP7Q9BQF6 1050 aa19.37■□□□□ 0.69
PRKN-202ENST00000366892 RIC8AQ9NPQ8 531 aa19.37■□□□□ 0.69
PRKN-202ENST00000366892 CXXC1Q9P0U4 656 aaPredicted RBP19.37■□□□□ 0.69
PRKN-202ENST00000366892 CIZ1Q9ULV3 898 aaPredicted RBP19.37■□□□□ 0.69
PRKN-202ENST00000366892 MYH7BA7E2Y1 1941 aa19.37■□□□□ 0.69
PRKN-202ENST00000366892 STXBP3O00186 592 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms