RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 GPBP1Q86WP2 473 aa10.15□□□□□ -0.78
CALD1-202ENST00000361901 SYCP3Q8IZU3 236 aa10.15□□□□□ -0.78
CALD1-202ENST00000361901 ZKSCAN4Q969J2 545 aaPredicted RBP10.15□□□□□ -0.78
CALD1-202ENST00000361901 ZMYND12Q9H0C1 365 aa10.15□□□□□ -0.78
CALD1-202ENST00000361901 HERC5Q9UII4 1024 aaKnown RBP10.15□□□□□ -0.78
CALD1-202ENST00000361901 NRAPQ86VF7 1730 aa10.15□□□□□ -0.78
CALD1-202ENST00000361901 AKAP11Q9UKA4 1901 aa10.15□□□□□ -0.78
CALD1-202ENST00000361901 PAPPAQ13219 1627 aa10.15□□□□□ -0.78
CALD1-202ENST00000361901 ZBED4O75132 1171 aa10.15□□□□□ -0.78
CALD1-202ENST00000361901 EIF2AK2P19525 551 aaKnown RBP10.15□□□□□ -0.78
CALD1-202ENST00000361901 DCAF4Q8WV16 495 aa10.15□□□□□ -0.78
CALD1-202ENST00000361901 PRR12Q9ULL5 1215 aa10.15□□□□□ -0.78
CALD1-202ENST00000361901 TTC36A6NLP5 189 aa10.15□□□□□ -0.78
CALD1-202ENST00000361901 FGRP09769 529 aa10.15□□□□□ -0.78
CALD1-202ENST00000361901 DNA2P51530 1060 aa10.15□□□□□ -0.78
CALD1-202ENST00000361901 IRX1P78414 480 aaPredicted RBP10.15□□□□□ -0.78
CALD1-202ENST00000361901 DGKZQ13574 1117 aa10.15□□□□□ -0.78
CALD1-202ENST00000361901 TMEM132AQ24JP5 1023 aa10.15□□□□□ -0.78
CALD1-202ENST00000361901 DCAF15Q66K64 600 aa10.15□□□□□ -0.78
CALD1-202ENST00000361901 ZNF579Q8NAF0 562 aaKnown RBP10.15□□□□□ -0.78
CALD1-202ENST00000361901 DPF2Q92785 391 aa10.15□□□□□ -0.78
CALD1-202ENST00000361901 MRFAP1L1Q96HT8 127 aa10.15□□□□□ -0.78
CALD1-202ENST00000361901 HACL1Q9UJ83 578 aa10.15□□□□□ -0.78
CALD1-202ENST00000361901 DNM3Q9UQ16 869 aa10.15□□□□□ -0.78
CALD1-202ENST00000361901 N4BP2Q86UW6 1770 aaPredicted RBP10.15□□□□□ -0.79
CALD1-202ENST00000361901 A0A087X0B3 334 aa10.14□□□□□ -0.79
CALD1-202ENST00000361901 TMCO5BA8MYB1 307 aa10.14□□□□□ -0.79
CALD1-202ENST00000361901 SETSIPP0DME0 302 aa10.14□□□□□ -0.79
CALD1-202ENST00000361901 ARHGAP4P98171 946 aa10.14□□□□□ -0.79
CALD1-202ENST00000361901 HDLBPQ00341 1268 aaKnown RBP10.14□□□□□ -0.79
CALD1-202ENST00000361901 FMR1Q06787 632 aaKnown RBP eCLIP10.14□□□□□ -0.79
CALD1-202ENST00000361901 ARL6IP4Q66PJ3 421 aaKnown RBP10.14□□□□□ -0.79
CALD1-202ENST00000361901 CCDC150Q8NCX0 1101 aa10.14□□□□□ -0.79
CALD1-202ENST00000361901 LARP4BQ92615 738 aaKnown RBP10.14□□□□□ -0.79
CALD1-202ENST00000361901 GSDMAQ96QA5 445 aa10.14□□□□□ -0.79
CALD1-202ENST00000361901 RUFY1Q96T51 708 aa10.14□□□□□ -0.79
CALD1-202ENST00000361901 GLIS2Q9BZE0 524 aaPredicted RBP10.14□□□□□ -0.79
CALD1-202ENST00000361901 GLT8D2Q9H1C3 349 aa10.14□□□□□ -0.79
CALD1-202ENST00000361901 PDE11AQ9HCR9 933 aa10.14□□□□□ -0.79
CALD1-202ENST00000361901 LZTFL1Q9NQ48 299 aa10.14□□□□□ -0.79
CALD1-202ENST00000361901 NYAP2Q9P242 653 aa10.14□□□□□ -0.79
CALD1-202ENST00000361901 MRPL11Q9Y3B7 192 aaKnown RBP10.14□□□□□ -0.79
CALD1-202ENST00000361901 SFI1A8K8P3 1242 aa10.14□□□□□ -0.79
CALD1-202ENST00000361901 E9PMD0 336 aa10.14□□□□□ -0.79
CALD1-202ENST00000361901 SLC37A4O43826 429 aa10.14□□□□□ -0.79
CALD1-202ENST00000361901 GNG11P61952 73 aa10.14□□□□□ -0.79
CALD1-202ENST00000361901 TBC1D8BQ0IIM8 1120 aa10.14□□□□□ -0.79
CALD1-202ENST00000361901 MTMR2Q13614 643 aa10.14□□□□□ -0.79
CALD1-202ENST00000361901 MORC3Q14149 939 aa10.14□□□□□ -0.79
CALD1-202ENST00000361901 NBPF12Q5TAG4 269 aaPredicted RBP10.14□□□□□ -0.79
CALD1-202ENST00000361901 GADL1Q6ZQY3 521 aa10.14□□□□□ -0.79
CALD1-202ENST00000361901 TBC1D5Q92609 795 aa10.14□□□□□ -0.79
CALD1-202ENST00000361901 DCPSQ96C86 337 aaKnown RBP10.14□□□□□ -0.79
CALD1-202ENST00000361901 SH2D3AQ9BRG2 576 aa10.14□□□□□ -0.79
CALD1-202ENST00000361901 GGA3Q9NZ52 723 aa10.14□□□□□ -0.79
CALD1-202ENST00000361901 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.14□□□□□ -0.79
CALD1-202ENST00000361901 FHOD1Q9Y613 1164 aa10.14□□□□□ -0.79
CALD1-202ENST00000361901 FAM13AO94988 1023 aa10.14□□□□□ -0.79
CALD1-202ENST00000361901 ZKSCAN8Q15776 578 aaPredicted RBP10.14□□□□□ -0.79
CALD1-202ENST00000361901 TDRD12Q587J7 1177 aaKnown RBP10.14□□□□□ -0.79
CALD1-202ENST00000361901 SH3BP5LQ7L8J4 393 aa10.14□□□□□ -0.79
CALD1-202ENST00000361901 PIGOQ8TEQ8 1089 aa10.14□□□□□ -0.79
CALD1-202ENST00000361901 SPON1Q9HCB6 807 aa10.14□□□□□ -0.79
CALD1-202ENST00000361901 COL4A1P02462 1669 aa10.14□□□□□ -0.79
CALD1-202ENST00000361901 POTEB3A0JP26 581 aa10.14□□□□□ -0.79
CALD1-202ENST00000361901 POTECB2RU33 542 aa10.14□□□□□ -0.79
CALD1-202ENST00000361901 BACH1O14867 736 aa10.14□□□□□ -0.79
CALD1-202ENST00000361901 KIF4AO95239 1232 aa10.14□□□□□ -0.79
CALD1-202ENST00000361901 ELF1P32519 619 aa10.14□□□□□ -0.79
CALD1-202ENST00000361901 MATR3P43243 847 aaKnown RBP eCLIP10.14□□□□□ -0.79
CALD1-202ENST00000361901 HMGCS2P54868 508 aa10.14□□□□□ -0.79
CALD1-202ENST00000361901 FBXW10Q5XX13 1052 aa10.14□□□□□ -0.79
CALD1-202ENST00000361901 HAUS3Q68CZ6 603 aa10.14□□□□□ -0.79
CALD1-202ENST00000361901 POTEBQ6S5H4 581 aa10.14□□□□□ -0.79
CALD1-202ENST00000361901 LRRC8AQ8IWT6 810 aa10.14□□□□□ -0.79
CALD1-202ENST00000361901 DYDC1Q8WWB3 177 aa10.14□□□□□ -0.79
CALD1-202ENST00000361901 CTAGE1Q96RT6 745 aa10.14□□□□□ -0.79
CALD1-202ENST00000361901 NOC4LQ9BVI4 516 aaKnown RBP10.14□□□□□ -0.79
CALD1-202ENST00000361901 CTTNQ14247 550 aaKnown RBP10.13□□□□□ -0.79
CALD1-202ENST00000361901 DPY19L2Q6NUT2 758 aa10.13□□□□□ -0.79
CALD1-202ENST00000361901 CNNM4Q6P4Q7 775 aa10.13□□□□□ -0.79
CALD1-202ENST00000361901 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.13□□□□□ -0.79
CALD1-202ENST00000361901 CCDC65Q8IXS2 484 aa10.13□□□□□ -0.79
CALD1-202ENST00000361901 NLGN2Q8NFZ4 835 aa10.13□□□□□ -0.79
CALD1-202ENST00000361901 DESI2Q9BSY9 194 aa10.13□□□□□ -0.79
CALD1-202ENST00000361901 SEPT11Q9NVA2 429 aaKnown RBP10.13□□□□□ -0.79
CALD1-202ENST00000361901 CSADQ9Y600 493 aa10.13□□□□□ -0.79
CALD1-202ENST00000361901 ASTN2O75129 1339 aaPredicted RBP10.13□□□□□ -0.79
CALD1-202ENST00000361901 USP27XA6NNY8 438 aa10.13□□□□□ -0.79
CALD1-202ENST00000361901 ACTN4O43707 911 aaKnown RBP10.13□□□□□ -0.79
CALD1-202ENST00000361901 PPP2R3AQ06190 1150 aa10.13□□□□□ -0.79
CALD1-202ENST00000361901 SPAG1Q07617 926 aa10.13□□□□□ -0.79
CALD1-202ENST00000361901 SPATA1Q5VX52 437 aa10.13□□□□□ -0.79
CALD1-202ENST00000361901 EEPD1Q7L9B9 569 aa10.13□□□□□ -0.79
CALD1-202ENST00000361901 RDH13Q8NBN7 331 aa10.13□□□□□ -0.79
CALD1-202ENST00000361901 AGBL1Q96MI9 1066 aa10.13□□□□□ -0.79
CALD1-202ENST00000361901 CRACR2AQ9BSW2 395 aa10.13□□□□□ -0.79
CALD1-202ENST00000361901 DNAJC18Q9H819 358 aa10.13□□□□□ -0.79
CALD1-202ENST00000361901 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.13□□□□□ -0.79
CALD1-202ENST00000361901 HPSEQ9Y251 543 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms