RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 GPATCH11Q8N954 259 aa11.88□□□□□ -0.51
CLIP1-203ENST00000361654 EAF2Q96CJ1 260 aaPredicted RBP11.88□□□□□ -0.51
CLIP1-203ENST00000361654 ERO1AQ96HE7 468 aa11.88□□□□□ -0.51
CLIP1-203ENST00000361654 PRDM5Q9NQX1 630 aaPredicted RBP11.88□□□□□ -0.51
CLIP1-203ENST00000361654 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.88□□□□□ -0.51
CLIP1-203ENST00000361654 ITM2BQ9Y287 266 aa11.88□□□□□ -0.51
CLIP1-203ENST00000361654 ARHGEF12Q9NZN5 1544 aa11.88□□□□□ -0.51
CLIP1-203ENST00000361654 TNPO2O14787 897 aaKnown RBP11.88□□□□□ -0.51
CLIP1-203ENST00000361654 EIF2AK2P19525 551 aaKnown RBP11.88□□□□□ -0.51
CLIP1-203ENST00000361654 ATP6V1E1P36543 226 aa11.88□□□□□ -0.51
CLIP1-203ENST00000361654 USP17L2Q6R6M4 530 aa11.88□□□□□ -0.51
CLIP1-203ENST00000361654 NUDCD1Q96RS6 583 aa11.88□□□□□ -0.51
CLIP1-203ENST00000361654 PSMB7Q99436 277 aa11.88□□□□□ -0.51
CLIP1-203ENST00000361654 ANTXR1Q9H6X2 564 aa11.88□□□□□ -0.51
CLIP1-203ENST00000361654 BSDC1Q9NW68 430 aaPredicted RBP11.88□□□□□ -0.51
CLIP1-203ENST00000361654 HYOU1Q9Y4L1 999 aa11.88□□□□□ -0.51
CLIP1-203ENST00000361654 PASKQ96RG2 1323 aa11.88□□□□□ -0.51
CLIP1-203ENST00000361654 JAK2O60674 1132 aa11.88□□□□□ -0.51
CLIP1-203ENST00000361654 ADD1P35611 737 aaKnown RBP11.88□□□□□ -0.51
CLIP1-203ENST00000361654 SLC16A2P36021 539 aa11.88□□□□□ -0.51
CLIP1-203ENST00000361654 PTGDRQ13258 359 aa11.88□□□□□ -0.51
CLIP1-203ENST00000361654 VEPH1Q14D04 833 aa11.88□□□□□ -0.51
CLIP1-203ENST00000361654 TSNAXIP1Q2TAA8 658 aa11.88□□□□□ -0.51
CLIP1-203ENST00000361654 KAZNQ674X7 775 aa11.88□□□□□ -0.51
CLIP1-203ENST00000361654 CC2D1AQ6P1N0 951 aaPredicted RBP11.88□□□□□ -0.51
CLIP1-203ENST00000361654 DNAJC24Q6P3W2 148 aa11.88□□□□□ -0.51
CLIP1-203ENST00000361654 CCDC13Q8IYE1 715 aa11.88□□□□□ -0.51
CLIP1-203ENST00000361654 TRMT44Q8IYL2 757 aaKnown RBP11.88□□□□□ -0.51
CLIP1-203ENST00000361654 HPCAL4Q9UM19 191 aa11.88□□□□□ -0.51
CLIP1-203ENST00000361654 MCF2LO15068 1137 aa11.88□□□□□ -0.51
CLIP1-203ENST00000361654 FDX1P10109 184 aa11.88□□□□□ -0.51
CLIP1-203ENST00000361654 ARHGEF18Q6ZSZ5 1173 aa11.88□□□□□ -0.51
CLIP1-203ENST00000361654 GPIHBP1Q8IV16 184 aa11.88□□□□□ -0.51
CLIP1-203ENST00000361654 KBTBD13C9JR72 458 aa11.87□□□□□ -0.51
CLIP1-203ENST00000361654 NR2F2P24468 414 aa11.87□□□□□ -0.51
CLIP1-203ENST00000361654 IFNA8P32881 189 aa11.87□□□□□ -0.51
CLIP1-203ENST00000361654 PNOCQ13519 176 aa11.87□□□□□ -0.51
CLIP1-203ENST00000361654 CDC37Q16543 378 aaPredicted RBP11.87□□□□□ -0.51
CLIP1-203ENST00000361654 DCAF4Q8WV16 495 aa11.87□□□□□ -0.51
CLIP1-203ENST00000361654 HEXIM2Q96MH2 286 aaKnown RBP11.87□□□□□ -0.51
CLIP1-203ENST00000361654 USP44Q9H0E7 712 aa11.87□□□□□ -0.51
CLIP1-203ENST00000361654 SEC31BQ9NQW1 1179 aa11.87□□□□□ -0.51
CLIP1-203ENST00000361654 TRIM35Q9UPQ4 493 aa11.87□□□□□ -0.51
CLIP1-203ENST00000361654 BIVM-ERCC5R4GMW8 1640 aa11.87□□□□□ -0.51
CLIP1-203ENST00000361654 PRPSAP2O60256 369 aa11.87□□□□□ -0.51
CLIP1-203ENST00000361654 TTC4O95801 387 aa11.87□□□□□ -0.51
CLIP1-203ENST00000361654 PFKFB1P16118 471 aa11.87□□□□□ -0.51
CLIP1-203ENST00000361654 NLRP10Q86W26 655 aa11.87□□□□□ -0.51
CLIP1-203ENST00000361654 SYNE4Q8N205 404 aa11.87□□□□□ -0.51
CLIP1-203ENST00000361654 SRP68Q9UHB9 627 aaKnown RBP11.87□□□□□ -0.51
CLIP1-203ENST00000361654 FEM1BQ9UK73 627 aa11.87□□□□□ -0.51
CLIP1-203ENST00000361654 MAST1Q9Y2H9 1570 aa11.87□□□□□ -0.51
CLIP1-203ENST00000361654 GOLGA8SH3BPF8 625 aa11.87□□□□□ -0.51
CLIP1-203ENST00000361654 SOX5P35711 763 aa11.87□□□□□ -0.51
CLIP1-203ENST00000361654 VPS41P49754 854 aa11.87□□□□□ -0.51
CLIP1-203ENST00000361654 MTX1Q13505 466 aa11.87□□□□□ -0.51
CLIP1-203ENST00000361654 MMEL1Q495T6 779 aa11.87□□□□□ -0.51
CLIP1-203ENST00000361654 TTC23LQ6PF05 361 aa11.87□□□□□ -0.51
CLIP1-203ENST00000361654 LRRC31Q6UY01 552 aa11.87□□□□□ -0.51
CLIP1-203ENST00000361654 MIPOL1Q8TD10 442 aa11.87□□□□□ -0.51
CLIP1-203ENST00000361654 EDC3Q96F86 508 aaKnown RBP11.87□□□□□ -0.51
CLIP1-203ENST00000361654 ANKARQ7Z5J8 1434 aa11.87□□□□□ -0.51
CLIP1-203ENST00000361654 INHBAP08476 426 aa11.87□□□□□ -0.51
CLIP1-203ENST00000361654 PMLP29590 882 aa11.87□□□□□ -0.51
CLIP1-203ENST00000361654 RAD51Q06609 339 aa11.87□□□□□ -0.51
CLIP1-203ENST00000361654 DMTNQ08495 405 aa11.87□□□□□ -0.51
CLIP1-203ENST00000361654 SEPT2Q15019 361 aa11.87□□□□□ -0.51
CLIP1-203ENST00000361654 OR6B3Q8NGW1 331 aa11.87□□□□□ -0.51
CLIP1-203ENST00000361654 PIGSQ96S52 555 aa11.87□□□□□ -0.51
CLIP1-203ENST00000361654 MSTO1Q9BUK6 570 aa11.87□□□□□ -0.51
CLIP1-203ENST00000361654 DDX41Q9UJV9 622 aaKnown RBP11.87□□□□□ -0.51
CLIP1-203ENST00000361654 TMEM247A6NEH6 219 aa11.86□□□□□ -0.51
CLIP1-203ENST00000361654 NVLO15381 856 aaKnown RBP11.86□□□□□ -0.51
CLIP1-203ENST00000361654 FCER1AP12319 257 aa11.86□□□□□ -0.51
CLIP1-203ENST00000361654 MARK3P27448 753 aa11.86□□□□□ -0.51
CLIP1-203ENST00000361654 PCK1P35558 622 aa11.86□□□□□ -0.51
CLIP1-203ENST00000361654 OSTNP61366 133 aa11.86□□□□□ -0.51
CLIP1-203ENST00000361654 LONRF3Q496Y0 759 aa11.86□□□□□ -0.51
CLIP1-203ENST00000361654 FAM173BQ6P4H8 233 aa11.86□□□□□ -0.51
CLIP1-203ENST00000361654 CCDC170Q8IYT3 715 aa11.86□□□□□ -0.51
CLIP1-203ENST00000361654 TLK1Q9UKI8 766 aa11.86□□□□□ -0.51
CLIP1-203ENST00000361654 SAR1BQ9Y6B6 198 aa11.86□□□□□ -0.51
CLIP1-203ENST00000361654 HUS1O60921 280 aa11.86□□□□□ -0.51
CLIP1-203ENST00000361654 AFPP02771 609 aaKnown RBP11.86□□□□□ -0.51
CLIP1-203ENST00000361654 CMA1P23946 247 aa11.86□□□□□ -0.51
CLIP1-203ENST00000361654 SLC7A5P2Q9GIP4 190 aa11.86□□□□□ -0.51
CLIP1-203ENST00000361654 PARVGQ9HBI0 331 aa11.86□□□□□ -0.51
CLIP1-203ENST00000361654 SMYD2Q9NRG4 433 aa11.86□□□□□ -0.51
CLIP1-203ENST00000361654 BTBD18B2RXH4 712 aa11.86□□□□□ -0.51
CLIP1-203ENST00000361654 USP17L10C9JJH3 530 aa11.86□□□□□ -0.51
CLIP1-203ENST00000361654 MAPK4P31152 587 aa11.86□□□□□ -0.51
CLIP1-203ENST00000361654 NAA25Q14CX7 972 aa11.86□□□□□ -0.51
CLIP1-203ENST00000361654 NSUN6Q8TEA1 469 aaKnown RBP11.86□□□□□ -0.51
CLIP1-203ENST00000361654 DHX38Q92620 1227 aaKnown RBP11.86□□□□□ -0.51
CLIP1-203ENST00000361654 EFCC1Q9HA90 598 aa11.86□□□□□ -0.51
CLIP1-203ENST00000361654 ZNF335Q9H4Z2 1342 aaPredicted RBP11.86□□□□□ -0.51
CLIP1-203ENST00000361654 PNMA6FA0A0J9YX94 578 aa11.86□□□□□ -0.51
CLIP1-203ENST00000361654 ASB14A6NK59 587 aa11.86□□□□□ -0.51
CLIP1-203ENST00000361654 CPP00450 1065 aa11.86□□□□□ -0.51
CLIP1-203ENST00000361654 CRKP46108 304 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms