RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 STIM1Q13586 685 aa12.09□□□□□ -0.47
TRAPPC4-201ENST00000359005 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC4-201ENST00000359005 CABP7Q86V35 215 aa12.09□□□□□ -0.47
TRAPPC4-201ENST00000359005 PDILTQ8N807 584 aa12.09□□□□□ -0.47
TRAPPC4-201ENST00000359005 EPSTI1Q96J88 318 aa12.09□□□□□ -0.47
TRAPPC4-201ENST00000359005 C12orf42Q96LP6 360 aa12.09□□□□□ -0.47
TRAPPC4-201ENST00000359005 FAM20AQ96MK3 541 aa12.09□□□□□ -0.47
TRAPPC4-201ENST00000359005 TMEM106CQ9BVX2 250 aa12.09□□□□□ -0.47
TRAPPC4-201ENST00000359005 UNC93B1Q9H1C4 597 aa12.09□□□□□ -0.47
TRAPPC4-201ENST00000359005 PORCNQ9H237 461 aa12.09□□□□□ -0.47
TRAPPC4-201ENST00000359005 MORF4L1Q9UBU8 362 aa12.09□□□□□ -0.47
TRAPPC4-201ENST00000359005 STK17AQ9UEE5 414 aa12.09□□□□□ -0.47
TRAPPC4-201ENST00000359005 PCDHA12Q9UN75 941 aa12.09□□□□□ -0.47
TRAPPC4-201ENST00000359005 PHIPQ8WWQ0 1821 aa12.09□□□□□ -0.47
TRAPPC4-201ENST00000359005 ACTN4O43707 911 aaKnown RBP12.08□□□□□ -0.48
TRAPPC4-201ENST00000359005 GTPBP6O43824 516 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC4-201ENST00000359005 FLOT1O75955 427 aa12.08□□□□□ -0.48
TRAPPC4-201ENST00000359005 CYP3A4P08684 503 aa12.08□□□□□ -0.48
TRAPPC4-201ENST00000359005 SREBF1P36956 1147 aa12.08□□□□□ -0.48
TRAPPC4-201ENST00000359005 TXKP42681 527 aa12.08□□□□□ -0.48
TRAPPC4-201ENST00000359005 GCLCP48506 637 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC4-201ENST00000359005 TKFCQ3LXA3 575 aa12.08□□□□□ -0.48
TRAPPC4-201ENST00000359005 Q4G0T1 1027 aa12.08□□□□□ -0.48
TRAPPC4-201ENST00000359005 SPECC1Q5M775 1068 aa12.08□□□□□ -0.48
TRAPPC4-201ENST00000359005 HAUS3Q68CZ6 603 aa12.08□□□□□ -0.48
TRAPPC4-201ENST00000359005 IGSF22Q8N9C0 903 aa12.08□□□□□ -0.48
TRAPPC4-201ENST00000359005 PAGE5Q96GU1 130 aa12.08□□□□□ -0.48
TRAPPC4-201ENST00000359005 PDLIM2Q96JY6 352 aa12.08□□□□□ -0.48
TRAPPC4-201ENST00000359005 BMP2KQ9NSY1 1161 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC4-201ENST00000359005 TMEM260Q9NX78 707 aa12.08□□□□□ -0.48
TRAPPC4-201ENST00000359005 HOXC10Q9NYD6 342 aa12.08□□□□□ -0.48
TRAPPC4-201ENST00000359005 PNMA3Q9UL41 463 aa12.08□□□□□ -0.48
TRAPPC4-201ENST00000359005 CCPG1Q9ULG6 757 aa12.08□□□□□ -0.48
TRAPPC4-201ENST00000359005 MEIS2O14770 477 aa12.07□□□□□ -0.48
TRAPPC4-201ENST00000359005 CBFA2T2O43439 604 aa12.07□□□□□ -0.48
TRAPPC4-201ENST00000359005 INHAP05111 366 aa12.07□□□□□ -0.48
TRAPPC4-201ENST00000359005 VCAM1P19320 739 aa12.07□□□□□ -0.48
TRAPPC4-201ENST00000359005 ERCC5P28715 1186 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC4-201ENST00000359005 TECP42680 631 aa12.07□□□□□ -0.48
TRAPPC4-201ENST00000359005 IRX3P78415 501 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC4-201ENST00000359005 ARHGAP4P98171 946 aa12.07□□□□□ -0.48
TRAPPC4-201ENST00000359005 MDM2Q00987 491 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC4-201ENST00000359005 SETQ01105 290 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC4-201ENST00000359005 PABPC4Q13310 644 aaKnown RBP eCLIP12.07□□□□□ -0.488e-8■■■■□ 23
TRAPPC4-201ENST00000359005 PNOCQ13519 176 aa12.07□□□□□ -0.48
TRAPPC4-201ENST00000359005 IRF5Q13568 498 aa12.07□□□□□ -0.48
TRAPPC4-201ENST00000359005 UBE2SQ16763 222 aa12.07□□□□□ -0.48
TRAPPC4-201ENST00000359005 CCDC174Q6PII3 467 aa12.07□□□□□ -0.48
TRAPPC4-201ENST00000359005 SARM1Q6SZW1 724 aa12.07□□□□□ -0.48
TRAPPC4-201ENST00000359005 CATSPERGQ6ZRH7 1159 aa12.07□□□□□ -0.48
TRAPPC4-201ENST00000359005 UBE2Q1Q7Z7E8 422 aa12.07□□□□□ -0.48
TRAPPC4-201ENST00000359005 MTMR9Q96QG7 549 aa12.07□□□□□ -0.48
TRAPPC4-201ENST00000359005 PANK2Q9BZ23 570 aa12.07□□□□□ -0.48
TRAPPC4-201ENST00000359005 TRIM5Q9C035 493 aa12.07□□□□□ -0.48
TRAPPC4-201ENST00000359005 RNF208Q9H0X6 261 aa12.07□□□□□ -0.48
TRAPPC4-201ENST00000359005 BTBD7Q9P203 1132 aa12.07□□□□□ -0.48
TRAPPC4-201ENST00000359005 PPP1R9AQ9ULJ8 1098 aa12.07□□□□□ -0.48
TRAPPC4-201ENST00000359005 PCDHA5Q9Y5H7 936 aa12.07□□□□□ -0.48
TRAPPC4-201ENST00000359005 USP17L15C9J2P7 530 aa12.06□□□□□ -0.48
TRAPPC4-201ENST00000359005 USP17L13C9JLJ4 530 aa12.06□□□□□ -0.48
TRAPPC4-201ENST00000359005 USP17L11C9JVI0 530 aa12.06□□□□□ -0.48
TRAPPC4-201ENST00000359005 USP17L18D6R9N7 530 aa12.06□□□□□ -0.48
TRAPPC4-201ENST00000359005 USP17L22D6RA61 530 aa12.06□□□□□ -0.48
TRAPPC4-201ENST00000359005 USP17L17D6RBQ6 530 aa12.06□□□□□ -0.48
TRAPPC4-201ENST00000359005 USP17L19D6RCP7 530 aa12.06□□□□□ -0.48
TRAPPC4-201ENST00000359005 USP17L20D6RJB6 530 aa12.06□□□□□ -0.48
TRAPPC4-201ENST00000359005 NRDCO43847 1150 aa12.06□□□□□ -0.48
TRAPPC4-201ENST00000359005 ADCY5O95622 1261 aa12.06□□□□□ -0.48
TRAPPC4-201ENST00000359005 CFBP00751 764 aa12.06□□□□□ -0.48
TRAPPC4-201ENST00000359005 GJB1P08034 283 aa12.06□□□□□ -0.48
TRAPPC4-201ENST00000359005 CIITAP33076 1130 aa12.06□□□□□ -0.48
TRAPPC4-201ENST00000359005 MYL5Q02045 173 aa12.06□□□□□ -0.48
TRAPPC4-201ENST00000359005 GRIN1Q05586 938 aa12.06□□□□□ -0.48
TRAPPC4-201ENST00000359005 USP17L24Q0WX57 530 aa12.06□□□□□ -0.48
TRAPPC4-201ENST00000359005 COG2Q14746 738 aa12.06□□□□□ -0.48
TRAPPC4-201ENST00000359005 XRRA1Q6P2D8 792 aa12.06□□□□□ -0.48
TRAPPC4-201ENST00000359005 USP17L6PQ6QN14 398 aa12.06□□□□□ -0.48
TRAPPC4-201ENST00000359005 SV2BQ7L1I2 683 aa12.06□□□□□ -0.48
TRAPPC4-201ENST00000359005 SH3RF1Q7Z6J0 888 aa12.06□□□□□ -0.48
TRAPPC4-201ENST00000359005 POTEDQ86YR6 584 aa12.06□□□□□ -0.48
TRAPPC4-201ENST00000359005 DRC7Q8IY82 874 aa12.06□□□□□ -0.48
TRAPPC4-201ENST00000359005 GPRC5AQ8NFJ5 357 aa12.06□□□□□ -0.48
TRAPPC4-201ENST00000359005 SPATA20Q8TB22 786 aa12.06□□□□□ -0.48
TRAPPC4-201ENST00000359005 MBOAT7Q96N66 472 aa12.06□□□□□ -0.48
TRAPPC4-201ENST00000359005 PAGR1Q9BTK6 254 aa12.06□□□□□ -0.48
TRAPPC4-201ENST00000359005 RPAP3Q9H6T3 665 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC4-201ENST00000359005 TTC12Q9H892 705 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC4-201ENST00000359005 SLC38A10Q9HBR0 1119 aa12.06□□□□□ -0.48
TRAPPC4-201ENST00000359005 TCEAL9Q9UHQ7 104 aa12.06□□□□□ -0.48
TRAPPC4-201ENST00000359005 BIN1O00499 593 aa12.05□□□□□ -0.48
TRAPPC4-201ENST00000359005 CYP2B6P20813 491 aa12.05□□□□□ -0.48
TRAPPC4-201ENST00000359005 MSNP26038 577 aaKnown RBP12.05□□□□□ -0.48
TRAPPC4-201ENST00000359005 CDC25BP30305 580 aa12.05□□□□□ -0.48
TRAPPC4-201ENST00000359005 AFMP43652 599 aa12.05□□□□□ -0.48
TRAPPC4-201ENST00000359005 GJA8P48165 433 aa12.05□□□□□ -0.48
TRAPPC4-201ENST00000359005 SARSP49591 514 aaKnown RBP12.05□□□□□ -0.48
TRAPPC4-201ENST00000359005 ERVK-9P63128 1117 aa12.05□□□□□ -0.48
TRAPPC4-201ENST00000359005 ERVK-24P63145 666 aa12.05□□□□□ -0.48
TRAPPC4-201ENST00000359005 MORC3Q14149 939 aa12.05□□□□□ -0.48
TRAPPC4-201ENST00000359005 KCNB1Q14721 858 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms