RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 FRMD3A2A2Y4 597 aa13.46□□□□□ -0.25
COL20A1-201ENST00000358894 MYCLP12524 364 aaPredicted RBP13.46□□□□□ -0.25
COL20A1-201ENST00000358894 STAT1P42224 750 aa13.46□□□□□ -0.25
COL20A1-201ENST00000358894 VSNL1P62760 191 aa13.46□□□□□ -0.25
COL20A1-201ENST00000358894 NAA35Q5VZE5 725 aa13.46□□□□□ -0.25
COL20A1-201ENST00000358894 RASGRP2Q7LDG7 609 aa13.46□□□□□ -0.25
COL20A1-201ENST00000358894 SWAP70Q9UH65 585 aa13.46□□□□□ -0.25
COL20A1-201ENST00000358894 MKRN1Q9UHC7 482 aaKnown RBP13.46□□□□□ -0.25
COL20A1-201ENST00000358894 STXBP3O00186 592 aa13.46□□□□□ -0.25
COL20A1-201ENST00000358894 ZNF18P17022 549 aa13.46□□□□□ -0.25
COL20A1-201ENST00000358894 CDC37Q16543 378 aaPredicted RBP13.46□□□□□ -0.25
COL20A1-201ENST00000358894 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.46□□□□□ -0.25
COL20A1-201ENST00000358894 MED4Q9NPJ6 270 aa13.46□□□□□ -0.25
COL20A1-201ENST00000358894 CTTNBP2NLQ9P2B4 639 aa13.46□□□□□ -0.25
COL20A1-201ENST00000358894 SLIT3O75094 1523 aa13.46□□□□□ -0.26
COL20A1-201ENST00000358894 POTEB3A0JP26 581 aa13.46□□□□□ -0.26
COL20A1-201ENST00000358894 POTECB2RU33 542 aa13.46□□□□□ -0.26
COL20A1-201ENST00000358894 APBA3O96018 575 aa13.46□□□□□ -0.26
COL20A1-201ENST00000358894 GCFC2P16383 781 aaKnown RBP13.46□□□□□ -0.26
COL20A1-201ENST00000358894 ACTN2P35609 894 aa13.46□□□□□ -0.26
COL20A1-201ENST00000358894 KLK7P49862 253 aa13.46□□□□□ -0.26
COL20A1-201ENST00000358894 PPFIA1Q13136 1202 aa13.46□□□□□ -0.26
COL20A1-201ENST00000358894 SEPT7Q16181 437 aaKnown RBP13.46□□□□□ -0.26
COL20A1-201ENST00000358894 POTEBQ6S5H4 581 aa13.46□□□□□ -0.26
COL20A1-201ENST00000358894 FAM178BQ8IXR5 827 aa13.46□□□□□ -0.26
COL20A1-201ENST00000358894 KRT12Q99456 494 aa13.46□□□□□ -0.26
COL20A1-201ENST00000358894 RABGAP1Q9Y3P9 1069 aa13.46□□□□□ -0.26
COL20A1-201ENST00000358894 SFI1A8K8P3 1242 aa13.45□□□□□ -0.26
COL20A1-201ENST00000358894 LRRC63Q05C16 580 aa13.45□□□□□ -0.26
COL20A1-201ENST00000358894 NSMFQ6X4W1 530 aa13.45□□□□□ -0.26
COL20A1-201ENST00000358894 CCDC121Q6ZUS5 278 aa13.45□□□□□ -0.26
COL20A1-201ENST00000358894 CCDC26Q8TAB7 109 aa13.45□□□□□ -0.26
COL20A1-201ENST00000358894 SELENOSQ9BQE4 189 aa13.45□□□□□ -0.26
COL20A1-201ENST00000358894 ANO3Q9BYT9 981 aa13.45□□□□□ -0.26
COL20A1-201ENST00000358894 CAPN7Q9Y6W3 813 aa13.45□□□□□ -0.26
COL20A1-201ENST00000358894 FLT1P17948 1338 aa13.45□□□□□ -0.26
COL20A1-201ENST00000358894 PRPF6O94906 941 aaKnown RBP13.45□□□□□ -0.26
COL20A1-201ENST00000358894 CLNS1AP54105 237 aaKnown RBP13.45□□□□□ -0.26
COL20A1-201ENST00000358894 KCNB1Q14721 858 aa13.45□□□□□ -0.26
COL20A1-201ENST00000358894 LARGE2Q8N3Y3 721 aa13.45□□□□□ -0.26
COL20A1-201ENST00000358894 CSRNP1Q96S65 589 aa13.45□□□□□ -0.26
COL20A1-201ENST00000358894 CPSF2Q9P2I0 782 aaKnown RBP13.45□□□□□ -0.26
COL20A1-201ENST00000358894 SPOPO43791 374 aa13.45□□□□□ -0.26
COL20A1-201ENST00000358894 PRPHP41219 470 aa13.45□□□□□ -0.26
COL20A1-201ENST00000358894 CCT5P48643 541 aa13.45□□□□□ -0.26
COL20A1-201ENST00000358894 TNS2Q63HR2 1409 aa13.45□□□□□ -0.26
COL20A1-201ENST00000358894 BHMT2Q9H2M3 363 aa13.45□□□□□ -0.26
COL20A1-201ENST00000358894 H2AFZP0C0S5 128 aa13.44□□□□□ -0.26
COL20A1-201ENST00000358894 PDE6BP35913 854 aa13.44□□□□□ -0.26
COL20A1-201ENST00000358894 GFPT1Q06210 699 aaPredicted RBP13.44□□□□□ -0.26
COL20A1-201ENST00000358894 H2AFVQ71UI9 128 aa13.44□□□□□ -0.26
COL20A1-201ENST00000358894 ELOA2Q8IYF1 753 aaPredicted RBP13.44□□□□□ -0.26
COL20A1-201ENST00000358894 SEPT12Q8IYM1 358 aa13.44□□□□□ -0.26
COL20A1-201ENST00000358894 CNPY4Q8N129 248 aa13.44□□□□□ -0.26
COL20A1-201ENST00000358894 NCAPGQ9BPX3 1015 aa13.44□□□□□ -0.26
COL20A1-201ENST00000358894 SPZ1Q9BXG8 430 aa13.44□□□□□ -0.26
COL20A1-201ENST00000358894 SUGCTQ9HAC7 445 aa13.44□□□□□ -0.26
COL20A1-201ENST00000358894 NALCNQ8IZF0 1738 aa13.44□□□□□ -0.26
COL20A1-201ENST00000358894 GCOM1H8Y6P7 765 aaPredicted RBP13.44□□□□□ -0.26
COL20A1-201ENST00000358894 hCG_1984214I3L0E3 225 aa13.44□□□□□ -0.26
COL20A1-201ENST00000358894 MYZAPP0CAP1 466 aa13.44□□□□□ -0.26
COL20A1-201ENST00000358894 ADGRF4Q8IZF3 695 aa13.44□□□□□ -0.26
COL20A1-201ENST00000358894 ZNF713Q8N859 430 aaPredicted RBP13.44□□□□□ -0.26
COL20A1-201ENST00000358894 RASAL2Q9UJF2 1139 aa13.44□□□□□ -0.26
COL20A1-201ENST00000358894 CAPN11Q9UMQ6 739 aa13.44□□□□□ -0.26
COL20A1-201ENST00000358894 BACH1O14867 736 aa13.44□□□□□ -0.26
COL20A1-201ENST00000358894 ZBTB5O15062 677 aa13.44□□□□□ -0.26
COL20A1-201ENST00000358894 NCK2O43639 380 aa13.44□□□□□ -0.26
COL20A1-201ENST00000358894 RHOBTB3O94955 611 aa13.44□□□□□ -0.26
COL20A1-201ENST00000358894 STAT3P40763 770 aa13.44□□□□□ -0.26
COL20A1-201ENST00000358894 SARSP49591 514 aaKnown RBP13.44□□□□□ -0.26
COL20A1-201ENST00000358894 ERVK-24P63145 666 aa13.44□□□□□ -0.26
COL20A1-201ENST00000358894 GNGT1P63211 74 aa13.44□□□□□ -0.26
COL20A1-201ENST00000358894 DLGAP5Q15398 846 aa13.44□□□□□ -0.26
COL20A1-201ENST00000358894 TRIM65Q6PJ69 517 aa13.44□□□□□ -0.26
COL20A1-201ENST00000358894 ARFGAP2Q8N6H7 521 aa13.44□□□□□ -0.26
COL20A1-201ENST00000358894 RAD54LQ92698 747 aa13.44□□□□□ -0.26
COL20A1-201ENST00000358894 TCHPQ9BT92 498 aa13.44□□□□□ -0.26
COL20A1-201ENST00000358894 EPB41L5Q9HCM4 733 aa13.44□□□□□ -0.26
COL20A1-201ENST00000358894 INTS13Q9NVM9 706 aa13.44□□□□□ -0.26
COL20A1-201ENST00000358894 KRIT1O00522 736 aa13.43□□□□□ -0.26
COL20A1-201ENST00000358894 ZNF185O15231 689 aa13.43□□□□□ -0.26
COL20A1-201ENST00000358894 HEXIM1O94992 359 aaKnown RBP13.43□□□□□ -0.26
COL20A1-201ENST00000358894 MYCNP04198 464 aaPredicted RBP13.43□□□□□ -0.26
COL20A1-201ENST00000358894 PRR5LQ6MZQ0 368 aa13.43□□□□□ -0.26
COL20A1-201ENST00000358894 NOA1Q8NC60 698 aaKnown RBP13.43□□□□□ -0.26
COL20A1-201ENST00000358894 BCAS4Q8TDM0 211 aa13.43□□□□□ -0.26
COL20A1-201ENST00000358894 MXD3Q9BW11 206 aa13.43□□□□□ -0.26
COL20A1-201ENST00000358894 COA1Q9GZY4 146 aa13.43□□□□□ -0.26
COL20A1-201ENST00000358894 MAD2L2Q9UI95 211 aa13.43□□□□□ -0.26
COL20A1-201ENST00000358894 A0A1W2PQC6 194 aa13.43□□□□□ -0.26
COL20A1-201ENST00000358894 POTEFA5A3E0 1075 aa13.43□□□□□ -0.26
COL20A1-201ENST00000358894 HGSO14964 777 aaPredicted RBP13.43□□□□□ -0.26
COL20A1-201ENST00000358894 POTEIP0CG38 1075 aa13.43□□□□□ -0.26
COL20A1-201ENST00000358894 EEF2P13639 858 aaKnown RBP13.43□□□□□ -0.26
COL20A1-201ENST00000358894 KRT5P13647 590 aa13.43□□□□□ -0.26
COL20A1-201ENST00000358894 COASYQ13057 564 aa13.43□□□□□ -0.26
COL20A1-201ENST00000358894 SEPT2Q15019 361 aa13.43□□□□□ -0.26
COL20A1-201ENST00000358894 ODR4Q5SWX8 454 aa13.43□□□□□ -0.26
COL20A1-201ENST00000358894 CEP85LQ5SZL2 805 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms