RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 MX2P20592 715 aa6.57□□□□□ -1.36
VPS13B-203ENST00000358544 GSTO1P78417 241 aa6.57□□□□□ -1.36
VPS13B-203ENST00000358544 UNC5CLQ8IV45 518 aa6.57□□□□□ -1.36
VPS13B-203ENST00000358544 PDZD8Q8NEN9 1154 aa6.57□□□□□ -1.36
VPS13B-203ENST00000358544 POLD4Q9HCU8 107 aa6.57□□□□□ -1.36
VPS13B-203ENST00000358544 A2MP01023 1474 aa6.57□□□□□ -1.36
VPS13B-203ENST00000358544 UBN2Q6ZU65 1347 aa6.57□□□□□ -1.36
VPS13B-203ENST00000358544 PSMD14O00487 310 aa6.57□□□□□ -1.36
VPS13B-203ENST00000358544 HOXB7P09629 217 aa6.57□□□□□ -1.36
VPS13B-203ENST00000358544 ESRRAP11474 423 aaPredicted RBP6.57□□□□□ -1.36
VPS13B-203ENST00000358544 CHN1P15882 459 aa6.57□□□□□ -1.36
VPS13B-203ENST00000358544 NOP14P78316 857 aaKnown RBP6.57□□□□□ -1.36
VPS13B-203ENST00000358544 ADCY1Q08828 1119 aa6.57□□□□□ -1.36
VPS13B-203ENST00000358544 SPATA21Q7Z572 469 aa6.57□□□□□ -1.36
VPS13B-203ENST00000358544 PALM2Q8IXS6 379 aa6.57□□□□□ -1.36
VPS13B-203ENST00000358544 FAM161BQ96MY7 647 aa6.57□□□□□ -1.36
VPS13B-203ENST00000358544 TTC1Q99614 292 aa6.57□□□□□ -1.36
VPS13B-203ENST00000358544 CFAP43Q8NDM7 1665 aa6.57□□□□□ -1.36
VPS13B-203ENST00000358544 FAM170AA1A519 330 aa6.57□□□□□ -1.36
VPS13B-203ENST00000358544 BAG3O95817 575 aa6.57□□□□□ -1.36
VPS13B-203ENST00000358544 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.57□□□□□ -1.36
VPS13B-203ENST00000358544 KIF21AQ7Z4S6 1674 aa6.57□□□□□ -1.36
VPS13B-203ENST00000358544 SHANK2Q9UPX8 1470 aa6.57□□□□□ -1.36
VPS13B-203ENST00000358544 STARD3NLO95772 234 aa6.57□□□□□ -1.36
VPS13B-203ENST00000358544 RARS2Q5T160 578 aaKnown RBP6.57□□□□□ -1.36
VPS13B-203ENST00000358544 CCNI2Q6ZMN8 369 aaPredicted RBP6.57□□□□□ -1.36
VPS13B-203ENST00000358544 WAPLQ7Z5K2 1190 aa6.57□□□□□ -1.36
VPS13B-203ENST00000358544 AGTPBP1Q9UPW5 1226 aa6.57□□□□□ -1.36
VPS13B-203ENST00000358544 MAGEB6P1A0A0J9YX57 407 aa6.57□□□□□ -1.36
VPS13B-203ENST00000358544 NCK2O43639 380 aa6.57□□□□□ -1.36
VPS13B-203ENST00000358544 TCP11X2Q5H9J9 407 aa6.57□□□□□ -1.36
VPS13B-203ENST00000358544 MMGT1Q8N4V1 131 aa6.57□□□□□ -1.36
VPS13B-203ENST00000358544 PAPOLBQ9NRJ5 636 aaKnown RBP6.57□□□□□ -1.36
VPS13B-203ENST00000358544 EYA2O00167 538 aa6.57□□□□□ -1.36
VPS13B-203ENST00000358544 S100BP04271 92 aaPredicted RBP6.57□□□□□ -1.36
VPS13B-203ENST00000358544 MARK3P27448 753 aa6.57□□□□□ -1.36
VPS13B-203ENST00000358544 OCA2Q04671 838 aa6.57□□□□□ -1.36
VPS13B-203ENST00000358544 GPBP1Q86WP2 473 aa6.57□□□□□ -1.36
VPS13B-203ENST00000358544 MYOCDQ8IZQ8 938 aa6.57□□□□□ -1.36
VPS13B-203ENST00000358544 MYCBPAPQ8TBZ2 947 aa6.57□□□□□ -1.36
VPS13B-203ENST00000358544 NXNQ6DKJ4 435 aa6.57□□□□□ -1.36
VPS13B-203ENST00000358544 RNPC3Q96LT9 517 aaKnown RBP6.57□□□□□ -1.36
VPS13B-203ENST00000358544 SUGCTQ9HAC7 445 aa6.57□□□□□ -1.36
VPS13B-203ENST00000358544 ZNF189O75820 626 aaPredicted RBP6.57□□□□□ -1.36
VPS13B-203ENST00000358544 RGS9BPQ6ZS82 235 aa6.57□□□□□ -1.36
VPS13B-203ENST00000358544 IL1RAPL1Q9NZN1 696 aa6.57□□□□□ -1.36
VPS13B-203ENST00000358544 PABPN1LA6NDY0 278 aaKnown RBP6.57□□□□□ -1.36
VPS13B-203ENST00000358544 CA4P22748 312 aa6.57□□□□□ -1.36
VPS13B-203ENST00000358544 POLR2FP61218 127 aaKnown RBP6.57□□□□□ -1.36
VPS13B-203ENST00000358544 SLITRK6Q9H5Y7 841 aa6.57□□□□□ -1.36
VPS13B-203ENST00000358544 NDUFB9Q9Y6M9 179 aa6.57□□□□□ -1.36
VPS13B-203ENST00000358544 ABCB4P21439 1286 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 SERPINI2O75830 405 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 SCTRP47872 440 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 RASA3Q14644 834 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 TRIML2Q8N7C3 387 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 CNOT6LQ96LI5 555 aaKnown RBP6.56□□□□□ -1.36
VPS13B-203ENST00000358544 LRRC1Q9BTT6 524 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 OR52Z1P0C646 297 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 HARSP12081 509 aaKnown RBP6.56□□□□□ -1.36
VPS13B-203ENST00000358544 BTKQ06187 659 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 SESTD1Q86VW0 696 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 MB21D1Q8N884 522 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 GPATCH8Q9UKJ3 1502 aaKnown RBP6.56□□□□□ -1.36
VPS13B-203ENST00000358544 LDHCP07864 332 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 FAM192AQ9GZU8 254 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 DNAJC17Q9NVM6 304 aaKnown RBP6.56□□□□□ -1.36
VPS13B-203ENST00000358544 AGTP01019 485 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 GFAPP14136 432 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 AP2B1P63010 937 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 NOA1Q8NC60 698 aaKnown RBP6.56□□□□□ -1.36
VPS13B-203ENST00000358544 SNX29Q8TEQ0 813 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 LRRC37BQ96QE4 947 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 ANKZF1Q9H8Y5 726 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 TOPBP1Q92547 1522 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 AHCYL1O43865 530 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 ATP4AP20648 1035 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 EEF1B2P24534 225 aaKnown RBP6.56□□□□□ -1.36
VPS13B-203ENST00000358544 TRAPPC10P48553 1259 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 RBM5P52756 815 aaKnown RBP eCLIP6.56□□□□□ -1.36
VPS13B-203ENST00000358544 SMYD3Q9H7B4 428 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 RMI1Q9H9A7 625 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 ZNF446Q9NWS9 450 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 USTQ9Y2C2 406 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 DCUN1D2Q6PH85 259 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 PATL1Q86TB9 770 aaKnown RBP6.56□□□□□ -1.36
VPS13B-203ENST00000358544 MIGA1Q8NAN2 632 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 P2RX5Q93086 422 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 SLC39A2Q9NP94 309 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 ABCC12Q96J65 1359 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 POC1B-GALNT4F8VUJ3 575 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 CCNT1O60563 726 aaKnown RBP6.56□□□□□ -1.36
VPS13B-203ENST00000358544 AARSP49588 968 aaKnown RBP eCLIP6.56□□□□□ -1.36
VPS13B-203ENST00000358544 SEC24CP53992 1094 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 MDM2Q00987 491 aaPredicted RBP6.56□□□□□ -1.36
VPS13B-203ENST00000358544 SCYL1Q96KG9 808 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 ABHD10Q9NUJ1 306 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 PTCH1Q13635 1447 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 WDR91A4D1P6 747 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 TTC4O95801 387 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms