RNA–Protein interactions for RNA: ENST00000358239.8

PPP1CA-202, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 2 BASIC

Gene PPP1CA, Length 1,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-202ENST00000358239 SPDYE3A6NKU9 549 aa23.54■■□□□ 1.36
PPP1CA-202ENST00000358239 FIBPO43427 364 aa23.54■■□□□ 1.36
PPP1CA-202ENST00000358239 CYP2C18P33260 490 aa23.54■■□□□ 1.36
PPP1CA-202ENST00000358239 METAP2P50579 478 aaKnown RBP eCLIP23.54■■□□□ 1.36
PPP1CA-202ENST00000358239 SMAD3P84022 425 aaKnown RBP23.54■■□□□ 1.36
PPP1CA-202ENST00000358239 FAM109BQ6ICB4 259 aaPredicted RBP23.54■■□□□ 1.36
PPP1CA-202ENST00000358239 BRF1Q92994 677 aa23.54■■□□□ 1.36
PPP1CA-202ENST00000358239 SPATA33Q96N06 139 aa23.54■■□□□ 1.36
PPP1CA-202ENST00000358239 AGXT2Q9BYV1 514 aa23.54■■□□□ 1.36
PPP1CA-202ENST00000358239 NAP1L2Q9ULW6 460 aaPredicted RBP23.54■■□□□ 1.36
PPP1CA-202ENST00000358239 SPATA31C2B4DYI2 1134 aa23.53■■□□□ 1.36
PPP1CA-202ENST00000358239 F2P00734 622 aa23.53■■□□□ 1.36
PPP1CA-202ENST00000358239 CPA1P15085 419 aa23.53■■□□□ 1.36
PPP1CA-202ENST00000358239 NEDD9Q14511 834 aa23.53■■□□□ 1.36
PPP1CA-202ENST00000358239 WWC2Q6AWC2 1192 aa23.53■■□□□ 1.36
PPP1CA-202ENST00000358239 NLRX1Q86UT6 975 aa23.53■■□□□ 1.36
PPP1CA-202ENST00000358239 DEFB123Q8N688 67 aa23.53■■□□□ 1.36
PPP1CA-202ENST00000358239 KAT2BQ92831 832 aa23.53■■□□□ 1.36
PPP1CA-202ENST00000358239 GPKOWQ92917 476 aaPredicted RBP eCLIP23.53■■□□□ 1.36
PPP1CA-202ENST00000358239 GLT8D2Q9H1C3 349 aa23.53■■□□□ 1.36
PPP1CA-202ENST00000358239 EHMT1Q9H9B1 1298 aa23.53■■□□□ 1.36
PPP1CA-202ENST00000358239 MLXIPQ9HAP2 919 aa23.53■■□□□ 1.36
PPP1CA-202ENST00000358239 IL23AQ9NPF7 189 aa23.53■■□□□ 1.36
PPP1CA-202ENST00000358239 NAPAP54920 295 aa23.52■■□□□ 1.36
PPP1CA-202ENST00000358239 SP2Q02086 613 aa23.52■■□□□ 1.36
PPP1CA-202ENST00000358239 APOBRQ0VD83 1088 aa23.52■■□□□ 1.36
PPP1CA-202ENST00000358239 CDHR1Q96JP9 859 aa23.52■■□□□ 1.36
PPP1CA-202ENST00000358239 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.52■■□□□ 1.362e-6■□□□□ 8.3
PPP1CA-202ENST00000358239 USP26Q9BXU7 913 aa23.52■■□□□ 1.36
PPP1CA-202ENST00000358239 FAM217BQ9NTX9 383 aaPredicted RBP23.52■■□□□ 1.36
PPP1CA-202ENST00000358239 NOD1Q9Y239 953 aa23.52■■□□□ 1.36
PPP1CA-202ENST00000358239 V9GY48 417 aaPredicted RBP23.52■■□□□ 1.36
PPP1CA-202ENST00000358239 PITPNM1O00562 1244 aa23.51■■□□□ 1.35
PPP1CA-202ENST00000358239 CDC27P30260 824 aa23.51■■□□□ 1.35
PPP1CA-202ENST00000358239 HSDL1Q3SXM5 330 aa23.51■■□□□ 1.35
PPP1CA-202ENST00000358239 METTL7BQ6UX53 244 aa23.51■■□□□ 1.35
PPP1CA-202ENST00000358239 RUFY3Q7L099 469 aa23.51■■□□□ 1.35
PPP1CA-202ENST00000358239 RPUSD2Q8IZ73 545 aaKnown RBP23.51■■□□□ 1.35
PPP1CA-202ENST00000358239 GIMAP8Q8ND71 665 aaPredicted RBP23.51■■□□□ 1.35
PPP1CA-202ENST00000358239 ZFP91Q96JP5 570 aaPredicted RBP23.51■■□□□ 1.35
PPP1CA-202ENST00000358239 SENP7Q9BQF6 1050 aa23.51■■□□□ 1.35
PPP1CA-202ENST00000358239 WNT8AQ9H1J5 351 aa23.51■■□□□ 1.35
PPP1CA-202ENST00000358239 BARHL2Q9NY43 387 aa23.51■■□□□ 1.35
PPP1CA-202ENST00000358239 UMODL1Q5DID0 1318 aa23.51■■□□□ 1.35
PPP1CA-202ENST00000358239 TET1Q8NFU7 2136 aa23.51■■□□□ 1.35
PPP1CA-202ENST00000358239 MYO9BQ13459 2157 aa23.5■■□□□ 1.35
PPP1CA-202ENST00000358239 PFKMP08237 780 aa23.5■■□□□ 1.35
PPP1CA-202ENST00000358239 CYP2C9P11712 490 aa23.5■■□□□ 1.35
PPP1CA-202ENST00000358239 PSEN2P49810 448 aa23.5■■□□□ 1.35
PPP1CA-202ENST00000358239 CHMP4BP1P59074 171 aa23.5■■□□□ 1.35
PPP1CA-202ENST00000358239 PTGISQ16647 500 aa23.5■■□□□ 1.35
PPP1CA-202ENST00000358239 TMEM240Q5SV17 173 aa23.5■■□□□ 1.35
PPP1CA-202ENST00000358239 C16orf59Q7L2K0 433 aa23.5■■□□□ 1.35
PPP1CA-202ENST00000358239 CCDC155Q8N6L0 562 aa23.5■■□□□ 1.35
PPP1CA-202ENST00000358239 C7orf31Q8N865 590 aa23.5■■□□□ 1.35
PPP1CA-202ENST00000358239 GPRASP2Q96D09 838 aa23.5■■□□□ 1.35
PPP1CA-202ENST00000358239 TM6SF1Q9BZW5 370 aa23.5■■□□□ 1.35
PPP1CA-202ENST00000358239 MTIF3Q9H2K0 278 aaKnown RBP23.5■■□□□ 1.35
PPP1CA-202ENST00000358239 ZSWIM6Q9HCJ5 1215 aa23.5■■□□□ 1.35
PPP1CA-202ENST00000358239 RIC8AQ9NPQ8 531 aa23.5■■□□□ 1.35
PPP1CA-202ENST00000358239 RTEL1Q9NZ71 1219 aa23.5■■□□□ 1.35
PPP1CA-202ENST00000358239 HAS3O00219 553 aa23.49■■□□□ 1.35
PPP1CA-202ENST00000358239 NOP56O00567 594 aaKnown RBP23.49■■□□□ 1.35
PPP1CA-202ENST00000358239 FOSP01100 380 aaPredicted RBP23.49■■□□□ 1.35
PPP1CA-202ENST00000358239 ZNF286BP0CG31 522 aa23.49■■□□□ 1.35
PPP1CA-202ENST00000358239 ADCY7P51828 1080 aa23.49■■□□□ 1.35
PPP1CA-202ENST00000358239 CCL23P55773 120 aa23.49■■□□□ 1.35
PPP1CA-202ENST00000358239 EVCP57679 992 aa23.49■■□□□ 1.35
PPP1CA-202ENST00000358239 BFSP2Q13515 415 aa23.49■■□□□ 1.35
PPP1CA-202ENST00000358239 MFSD10Q14728 455 aa23.49■■□□□ 1.35
PPP1CA-202ENST00000358239 UBE2SQ16763 222 aa23.49■■□□□ 1.35
PPP1CA-202ENST00000358239 GTF2IRD1Q9UHL9 959 aa23.49■■□□□ 1.35
PPP1CA-202ENST00000358239 PCDHA6Q9UN73 950 aa23.49■■□□□ 1.35
PPP1CA-202ENST00000358239 PCDHA8Q9Y5H6 950 aa23.49■■□□□ 1.35
PPP1CA-202ENST00000358239 CYP46A1Q9Y6A2 500 aa23.49■■□□□ 1.35
PPP1CA-202ENST00000358239 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.48■■□□□ 1.35
PPP1CA-202ENST00000358239 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.48■■□□□ 1.35
PPP1CA-202ENST00000358239 STXBP3O00186 592 aa23.48■■□□□ 1.35
PPP1CA-202ENST00000358239 RFC2P35250 354 aa23.48■■□□□ 1.35
PPP1CA-202ENST00000358239 ADD1P35611 737 aaKnown RBP23.48■■□□□ 1.35
PPP1CA-202ENST00000358239 SEMA3FQ13275 785 aa23.48■■□□□ 1.35
PPP1CA-202ENST00000358239 PFKFB3Q16875 520 aaPredicted RBP23.48■■□□□ 1.35
PPP1CA-202ENST00000358239 KIAA0753Q2KHM9 967 aa23.48■■□□□ 1.35
PPP1CA-202ENST00000358239 ZNF697Q5TEC3 545 aa23.48■■□□□ 1.35
PPP1CA-202ENST00000358239 RASIP1Q5U651 963 aa23.48■■□□□ 1.35
PPP1CA-202ENST00000358239 ZNF365Q70YC5 407 aa23.48■■□□□ 1.35
PPP1CA-202ENST00000358239 CAGE1Q8TC20 777 aa23.48■■□□□ 1.35
PPP1CA-202ENST00000358239 WDR81Q562E7 1941 aa23.48■■□□□ 1.35
PPP1CA-202ENST00000358239 COL6A3P12111 3177 aa23.48■■□□□ 1.35
PPP1CA-202ENST00000358239 MYH9P35579 1960 aaKnown RBP23.47■■□□□ 1.35
PPP1CA-202ENST00000358239 MAFGO15525 162 aa23.47■■□□□ 1.35
PPP1CA-202ENST00000358239 EIF5BO60841 1220 aaKnown RBP23.47■■□□□ 1.35
PPP1CA-202ENST00000358239 FGBP02675 491 aa23.47■■□□□ 1.35
PPP1CA-202ENST00000358239 ACRP10323 421 aa23.47■■□□□ 1.35
PPP1CA-202ENST00000358239 AP3B2Q13367 1082 aa23.47■■□□□ 1.35
PPP1CA-202ENST00000358239 TYW1BQ6NUM6 668 aa23.47■■□□□ 1.35
PPP1CA-202ENST00000358239 RETREG2Q8NC44 543 aa23.47■■□□□ 1.35
PPP1CA-202ENST00000358239 CCDC12Q8WUD4 166 aaPredicted RBP23.47■■□□□ 1.35
PPP1CA-202ENST00000358239 TMEM265A0A087WTH1 108 aa23.46■■□□□ 1.35
PPP1CA-202ENST00000358239 SMCO2A6NFE2 343 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms