RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 PLAAQ9Y263 795 aa10.97□□□□□ -0.65
RNF40-202ENST00000357890 USP17L3A6NCW0 530 aa10.96□□□□□ -0.65
RNF40-202ENST00000357890 USP17L4A6NCW7 530 aa10.96□□□□□ -0.65
RNF40-202ENST00000357890 GNPATO15228 680 aa10.96□□□□□ -0.65
RNF40-202ENST00000357890 CTNND1O60716 968 aaKnown RBP10.96□□□□□ -0.65
RNF40-202ENST00000357890 FTCDO95954 541 aa10.96□□□□□ -0.65
RNF40-202ENST00000357890 CHRM1P11229 460 aaPredicted RBP10.96□□□□□ -0.65
RNF40-202ENST00000357890 PLCG1P19174 1290 aa10.96□□□□□ -0.65
RNF40-202ENST00000357890 RASSF7Q02833 373 aa10.96□□□□□ -0.65
RNF40-202ENST00000357890 IKQ13123 557 aaPredicted RBP10.96□□□□□ -0.65
RNF40-202ENST00000357890 WDR93Q6P2C0 686 aa10.96□□□□□ -0.65
RNF40-202ENST00000357890 SAMD1Q6SPF0 538 aaPredicted RBP10.96□□□□□ -0.65
RNF40-202ENST00000357890 USP17L1Q7RTZ2 530 aa10.96□□□□□ -0.65
RNF40-202ENST00000357890 DGKHQ86XP1 1220 aa10.96□□□□□ -0.65
RNF40-202ENST00000357890 HVCN1Q96D96 273 aa10.96□□□□□ -0.65
RNF40-202ENST00000357890 UBA5Q9GZZ9 404 aa10.96□□□□□ -0.65
RNF40-202ENST00000357890 BIN2Q9UBW5 565 aaPredicted RBP10.96□□□□□ -0.65
RNF40-202ENST00000357890 SPATA31A5Q5VU36 1347 aa10.96□□□□□ -0.65
RNF40-202ENST00000357890 SPATA31A7Q8IWB4 1347 aa10.96□□□□□ -0.65
RNF40-202ENST00000357890 CNTNAP5Q8WYK1 1306 aa10.96□□□□□ -0.65
RNF40-202ENST00000357890 NID2Q14112 1375 aa10.96□□□□□ -0.65
RNF40-202ENST00000357890 SMCO2A6NFE2 343 aa10.96□□□□□ -0.65
RNF40-202ENST00000357890 KLRF2D3W0D1 207 aa10.96□□□□□ -0.65
RNF40-202ENST00000357890 EHHADHQ08426 723 aa10.96□□□□□ -0.65
RNF40-202ENST00000357890 TCERG1LQ5VWI1 586 aa10.96□□□□□ -0.65
RNF40-202ENST00000357890 KRT79Q5XKE5 535 aa10.96□□□□□ -0.65
RNF40-202ENST00000357890 ALS2CLQ60I27 953 aa10.96□□□□□ -0.65
RNF40-202ENST00000357890 GALNT17Q6IS24 598 aa10.96□□□□□ -0.65
RNF40-202ENST00000357890 ZNF804AQ7Z570 1209 aa10.96□□□□□ -0.65
RNF40-202ENST00000357890 P2RX5Q93086 422 aa10.96□□□□□ -0.65
RNF40-202ENST00000357890 NOX5Q96PH1 765 aa10.96□□□□□ -0.65
RNF40-202ENST00000357890 EPN3Q9H201 632 aa10.96□□□□□ -0.65
RNF40-202ENST00000357890 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.96□□□□□ -0.65
RNF40-202ENST00000357890 TBC1D7Q9P0N9 293 aa10.96□□□□□ -0.65
RNF40-202ENST00000357890 RTCBQ9Y3I0 505 aaKnown RBP10.96□□□□□ -0.65
RNF40-202ENST00000357890 WTIPA6NIX2 430 aaPredicted RBP10.96□□□□□ -0.66
RNF40-202ENST00000357890 EIF6P56537 245 aaKnown RBP10.96□□□□□ -0.66
RNF40-202ENST00000357890 RUFY4Q6ZNE9 571 aa10.96□□□□□ -0.66
RNF40-202ENST00000357890 ADAT2Q7Z6V5 191 aaKnown RBP10.96□□□□□ -0.66
RNF40-202ENST00000357890 STAG2Q8N3U4 1231 aa10.96□□□□□ -0.66
RNF40-202ENST00000357890 RNF217Q8TC41 542 aa10.96□□□□□ -0.66
RNF40-202ENST00000357890 LZTS2Q9BRK4 669 aa10.96□□□□□ -0.66
RNF40-202ENST00000357890 ACTR5Q9H9F9 607 aaPredicted RBP10.96□□□□□ -0.66
RNF40-202ENST00000357890 KCNK9Q9NPC2 374 aa10.96□□□□□ -0.66
RNF40-202ENST00000357890 OR52Z1P0C646 297 aa10.95□□□□□ -0.66
RNF40-202ENST00000357890 TCP1P17987 556 aaKnown RBP10.95□□□□□ -0.66
RNF40-202ENST00000357890 MMP14P50281 582 aa10.95□□□□□ -0.66
RNF40-202ENST00000357890 ZBED6P86452 979 aa10.95□□□□□ -0.66
RNF40-202ENST00000357890 PSMD2Q13200 908 aa10.95□□□□□ -0.66
RNF40-202ENST00000357890 KRT25Q7Z3Z0 450 aa10.95□□□□□ -0.66
RNF40-202ENST00000357890 SPATA4Q8NEY3 305 aa10.95□□□□□ -0.66
RNF40-202ENST00000357890 SPATA20Q8TB22 786 aa10.95□□□□□ -0.66
RNF40-202ENST00000357890 NSMCE1Q8WV22 266 aa10.95□□□□□ -0.66
RNF40-202ENST00000357890 HPS3Q969F9 1004 aa10.95□□□□□ -0.66
RNF40-202ENST00000357890 MS4A14Q96JA4 679 aa10.95□□□□□ -0.66
RNF40-202ENST00000357890 ITIH6Q6UXX5 1313 aa10.95□□□□□ -0.66
RNF40-202ENST00000357890 PHF20L1A8MW92 1017 aa10.95□□□□□ -0.66
RNF40-202ENST00000357890 VEGFAP15692 232 aaPredicted RBP10.95□□□□□ -0.66
RNF40-202ENST00000357890 RFC4P35249 363 aa10.95□□□□□ -0.66
RNF40-202ENST00000357890 SESN3P58005 492 aa10.95□□□□□ -0.66
RNF40-202ENST00000357890 IRX1P78414 480 aaPredicted RBP10.95□□□□□ -0.66
RNF40-202ENST00000357890 ATP11AP98196 1134 aa10.95□□□□□ -0.66
RNF40-202ENST00000357890 EMBQ6PCB8 327 aa10.95□□□□□ -0.66
RNF40-202ENST00000357890 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.95□□□□□ -0.66
RNF40-202ENST00000357890 MARCH10Q8NA82 808 aaPredicted RBP10.95□□□□□ -0.66
RNF40-202ENST00000357890 SH3GLB2Q9NR46 395 aa10.95□□□□□ -0.66
RNF40-202ENST00000357890 AFF2P51816 1311 aa10.95□□□□□ -0.66
RNF40-202ENST00000357890 TJP1Q07157 1748 aa10.95□□□□□ -0.66
RNF40-202ENST00000357890 RNF225M0QZC1 329 aaPredicted RBP10.95□□□□□ -0.66
RNF40-202ENST00000357890 PPP1R2P41236 205 aa10.95□□□□□ -0.66
RNF40-202ENST00000357890 RAPGEF1Q13905 1077 aa10.95□□□□□ -0.66
RNF40-202ENST00000357890 SH3RF1Q7Z6J0 888 aa10.95□□□□□ -0.66
RNF40-202ENST00000357890 FBXO33Q7Z6M2 555 aa10.95□□□□□ -0.66
RNF40-202ENST00000357890 CCDC84Q86UT8 332 aaPredicted RBP10.95□□□□□ -0.66
RNF40-202ENST00000357890 SLF2Q8IX21 1173 aa10.95□□□□□ -0.66
RNF40-202ENST00000357890 RPGRQ92834 1020 aaKnown RBP10.95□□□□□ -0.66
RNF40-202ENST00000357890 SPAG5Q96R06 1193 aa10.95□□□□□ -0.66
RNF40-202ENST00000357890 G3BP2Q9UN86 482 aaKnown RBP10.95□□□□□ -0.66
RNF40-202ENST00000357890 GMNCA6NCL1 334 aa10.94□□□□□ -0.66
RNF40-202ENST00000357890 DIAPH2O60879 1101 aa10.94□□□□□ -0.66
RNF40-202ENST00000357890 CPP00450 1065 aa10.94□□□□□ -0.66
RNF40-202ENST00000357890 KLK7P49862 253 aa10.94□□□□□ -0.66
RNF40-202ENST00000357890 FAM43BQ6ZT52 329 aaPredicted RBP10.94□□□□□ -0.66
RNF40-202ENST00000357890 ADSSL1Q8N142 457 aa10.94□□□□□ -0.66
RNF40-202ENST00000357890 CCDC197Q8NCU1 140 aa10.94□□□□□ -0.66
RNF40-202ENST00000357890 DHTKD1Q96HY7 919 aaPredicted RBP10.94□□□□□ -0.66
RNF40-202ENST00000357890 NSRP1Q9H0G5 558 aaKnown RBP10.94□□□□□ -0.66
RNF40-202ENST00000357890 THAP9Q9H5L6 903 aa10.94□□□□□ -0.66
RNF40-202ENST00000357890 KCNK3O14649 394 aa10.94□□□□□ -0.66
RNF40-202ENST00000357890 KCNQ2O43526 872 aa10.94□□□□□ -0.66
RNF40-202ENST00000357890 AP1G2O75843 785 aa10.94□□□□□ -0.66
RNF40-202ENST00000357890 MYL1P05976 194 aa10.94□□□□□ -0.66
RNF40-202ENST00000357890 PDHA1P08559 390 aa10.94□□□□□ -0.66
RNF40-202ENST00000357890 NEFHP12036 1026 aa10.94□□□□□ -0.66
RNF40-202ENST00000357890 CCNE1P24864 410 aa10.94□□□□□ -0.66
RNF40-202ENST00000357890 CARSP49589 748 aaKnown RBP10.94□□□□□ -0.66
RNF40-202ENST00000357890 POLE2P56282 527 aa10.94□□□□□ -0.66
RNF40-202ENST00000357890 LRRC41Q15345 812 aa10.94□□□□□ -0.66
RNF40-202ENST00000357890 NELFCDQ8IXH7 590 aa10.94□□□□□ -0.66
RNF40-202ENST00000357890 SLC44A5Q8NCS7 719 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms