RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 ABCB6Q9NP58 842 aa14.15□□□□□ -0.14
RTFDC1-202ENST00000357348 LZTFL1Q9NQ48 299 aa14.15□□□□□ -0.14
RTFDC1-202ENST00000357348 PCDHB6Q9Y5E3 794 aa14.15□□□□□ -0.14
RTFDC1-202ENST00000357348 PCNTO95613 3336 aa14.15□□□□□ -0.14
RTFDC1-202ENST00000357348 PNMA6FA0A0J9YX94 578 aa14.15□□□□□ -0.14
RTFDC1-202ENST00000357348 A0A0U1RQJ8 604 aa14.15□□□□□ -0.14
RTFDC1-202ENST00000357348 CTAGE9A4FU28 777 aa14.15□□□□□ -0.14
RTFDC1-202ENST00000357348 SMCO2A6NFE2 343 aa14.15□□□□□ -0.14
RTFDC1-202ENST00000357348 LRRC10BA6NIK2 292 aa14.15□□□□□ -0.14
RTFDC1-202ENST00000357348 IRF6O14896 467 aa14.15□□□□□ -0.14
RTFDC1-202ENST00000357348 CD44P16070 742 aaKnown RBP14.15□□□□□ -0.14
RTFDC1-202ENST00000357348 SMARCA1P28370 1054 aa14.15□□□□□ -0.14
RTFDC1-202ENST00000357348 WDR93Q6P2C0 686 aa14.15□□□□□ -0.14
RTFDC1-202ENST00000357348 GRAMD1CQ8IYS0 662 aa14.15□□□□□ -0.14
RTFDC1-202ENST00000357348 ANKRD13AQ8IZ07 590 aa14.15□□□□□ -0.14
RTFDC1-202ENST00000357348 ATRIPQ8WXE1 791 aa14.15□□□□□ -0.14
RTFDC1-202ENST00000357348 RPAP3Q9H6T3 665 aaPredicted RBP14.15□□□□□ -0.14
RTFDC1-202ENST00000357348 LCMT1Q9UIC8 334 aa14.15□□□□□ -0.14
RTFDC1-202ENST00000357348 AFG3L2Q9Y4W6 797 aa14.15□□□□□ -0.14
RTFDC1-202ENST00000357348 FLOT1O75955 427 aa14.14□□□□□ -0.15
RTFDC1-202ENST00000357348 CELF2O95319 508 aaKnown RBP14.14□□□□□ -0.15
RTFDC1-202ENST00000357348 GYPCP04921 128 aa14.14□□□□□ -0.15
RTFDC1-202ENST00000357348 AMPD2Q01433 879 aa14.14□□□□□ -0.15
RTFDC1-202ENST00000357348 ZNF569Q5MCW4 686 aa14.14□□□□□ -0.15
RTFDC1-202ENST00000357348 NOL9Q5SY16 702 aaKnown RBP14.14□□□□□ -0.15
RTFDC1-202ENST00000357348 TMTC1Q8IUR5 882 aa14.14□□□□□ -0.15
RTFDC1-202ENST00000357348 WDR18Q9BV38 432 aa14.14□□□□□ -0.15
RTFDC1-202ENST00000357348 CSRNP2Q9H175 543 aa14.14□□□□□ -0.15
RTFDC1-202ENST00000357348 PUF60Q9UHX1 559 aaKnown RBP14.14□□□□□ -0.15
RTFDC1-202ENST00000357348 PPP1R3GB7ZBB8 358 aa14.14□□□□□ -0.15
RTFDC1-202ENST00000357348 ARHGAP25P42331 645 aa14.14□□□□□ -0.15
RTFDC1-202ENST00000357348 PIK3AP1Q6ZUJ8 805 aa14.14□□□□□ -0.15
RTFDC1-202ENST00000357348 ARMC9Q7Z3E5 817 aa14.14□□□□□ -0.15
RTFDC1-202ENST00000357348 SLC35F6Q8N357 371 aa14.14□□□□□ -0.15
RTFDC1-202ENST00000357348 FAM71BQ8TC56 605 aa14.14□□□□□ -0.15
RTFDC1-202ENST00000357348 GSDMAQ96QA5 445 aa14.14□□□□□ -0.15
RTFDC1-202ENST00000357348 NAPGQ99747 312 aaPredicted RBP14.14□□□□□ -0.15
RTFDC1-202ENST00000357348 GINM1Q9NU53 330 aa14.14□□□□□ -0.15
RTFDC1-202ENST00000357348 PCDHA1Q9Y5I3 950 aa14.14□□□□□ -0.15
RTFDC1-202ENST00000357348 PAPPA2Q9BXP8 1791 aa14.13□□□□□ -0.15
RTFDC1-202ENST00000357348 PTPRFP10586 1907 aa14.13□□□□□ -0.15
RTFDC1-202ENST00000357348 SYNRGQ9UMZ2 1314 aa14.13□□□□□ -0.15
RTFDC1-202ENST00000357348 USP14P54578 494 aa14.13□□□□□ -0.15
RTFDC1-202ENST00000357348 VSNL1P62760 191 aa14.13□□□□□ -0.15
RTFDC1-202ENST00000357348 DPYDQ12882 1025 aa14.13□□□□□ -0.15
RTFDC1-202ENST00000357348 USP49Q70CQ1 688 aa14.13□□□□□ -0.15
RTFDC1-202ENST00000357348 BLIDQ8IZY5 108 aa14.13□□□□□ -0.15
RTFDC1-202ENST00000357348 IPO4Q8TEX9 1081 aaKnown RBP14.13□□□□□ -0.15
RTFDC1-202ENST00000357348 ZSWIM4Q9H7M6 989 aa14.13□□□□□ -0.15
RTFDC1-202ENST00000357348 EFCC1Q9HA90 598 aa14.13□□□□□ -0.15
RTFDC1-202ENST00000357348 BRMS1Q9HCU9 246 aa14.13□□□□□ -0.15
RTFDC1-202ENST00000357348 VPS18Q9P253 973 aa14.13□□□□□ -0.15
RTFDC1-202ENST00000357348 BIN2Q9UBW5 565 aaPredicted RBP14.13□□□□□ -0.15
RTFDC1-202ENST00000357348 LIMA1Q9UHB6 759 aaKnown RBP14.13□□□□□ -0.15
RTFDC1-202ENST00000357348 SYNPO2Q9UMS6 1093 aa14.13□□□□□ -0.15
RTFDC1-202ENST00000357348 RRP15Q9Y3B9 282 aaKnown RBP14.13□□□□□ -0.15
RTFDC1-202ENST00000357348 VGLL3A8MV65 326 aa14.13□□□□□ -0.15
RTFDC1-202ENST00000357348 WDR46O15213 610 aaKnown RBP14.13□□□□□ -0.15
RTFDC1-202ENST00000357348 CASP14P31944 242 aa14.13□□□□□ -0.15
RTFDC1-202ENST00000357348 FXR1P51114 621 aaKnown RBP eCLIP14.13□□□□□ -0.15
RTFDC1-202ENST00000357348 CASP8Q14790 479 aa14.13□□□□□ -0.15
RTFDC1-202ENST00000357348 FILIP1LQ4L180 1135 aa14.13□□□□□ -0.15
RTFDC1-202ENST00000357348 LEKR1Q6ZMV7 388 aa14.13□□□□□ -0.15
RTFDC1-202ENST00000357348 CPXCR1Q8N123 301 aa14.13□□□□□ -0.15
RTFDC1-202ENST00000357348 CCDC148Q8NFR7 591 aa14.13□□□□□ -0.15
RTFDC1-202ENST00000357348 CHURC1Q8WUH1 139 aa14.13□□□□□ -0.15
RTFDC1-202ENST00000357348 LPAR1Q92633 364 aa14.13□□□□□ -0.15
RTFDC1-202ENST00000357348 OPTNQ96CV9 577 aa14.13□□□□□ -0.15
RTFDC1-202ENST00000357348 PAGE5Q96GU1 130 aa14.13□□□□□ -0.15
RTFDC1-202ENST00000357348 WNK4Q96J92 1243 aa14.13□□□□□ -0.15
RTFDC1-202ENST00000357348 VIPAS39Q9H9C1 493 aa14.13□□□□□ -0.15
RTFDC1-202ENST00000357348 GPBP1L1Q9HC44 474 aaPredicted RBP14.13□□□□□ -0.15
RTFDC1-202ENST00000357348 MED4Q9NPJ6 270 aa14.13□□□□□ -0.15
RTFDC1-202ENST00000357348 TMEM260Q9NX78 707 aa14.13□□□□□ -0.15
RTFDC1-202ENST00000357348 PCDHA4Q9UN74 947 aa14.13□□□□□ -0.15
RTFDC1-202ENST00000357348 A0A087X0B3 334 aa14.12□□□□□ -0.15
RTFDC1-202ENST00000357348 CTAGE15A4D2H0 777 aa14.12□□□□□ -0.15
RTFDC1-202ENST00000357348 CTAGE8P0CG41 777 aa14.12□□□□□ -0.15
RTFDC1-202ENST00000357348 ERVK-24P63145 666 aa14.12□□□□□ -0.15
RTFDC1-202ENST00000357348 MCM6Q14566 821 aa14.12□□□□□ -0.15
RTFDC1-202ENST00000357348 UBE2SQ16763 222 aa14.12□□□□□ -0.15
RTFDC1-202ENST00000357348 BTNL9Q6UXG8 535 aa14.12□□□□□ -0.15
RTFDC1-202ENST00000357348 GADL1Q6ZQY3 521 aa14.12□□□□□ -0.15
RTFDC1-202ENST00000357348 CTAGE6Q86UF2 777 aa14.12□□□□□ -0.15
RTFDC1-202ENST00000357348 CTAGE4Q8IX94 777 aa14.12□□□□□ -0.15
RTFDC1-202ENST00000357348 MTMR8Q96EF0 704 aa14.12□□□□□ -0.15
RTFDC1-202ENST00000357348 SH3GLB2Q9NR46 395 aa14.12□□□□□ -0.15
RTFDC1-202ENST00000357348 TMOD4Q9NZQ9 345 aa14.12□□□□□ -0.15
RTFDC1-202ENST00000357348 FEM1BQ9UK73 627 aa14.12□□□□□ -0.15
RTFDC1-202ENST00000357348 WNT7AO00755 349 aa14.11□□□□□ -0.15
RTFDC1-202ENST00000357348 AARSP49588 968 aaKnown RBP eCLIP14.11□□□□□ -0.15
RTFDC1-202ENST00000357348 TRIM14Q14142 442 aa14.11□□□□□ -0.15
RTFDC1-202ENST00000357348 TREML2Q5T2D2 321 aa14.11□□□□□ -0.15
RTFDC1-202ENST00000357348 FBXO11Q86XK2 927 aa14.11□□□□□ -0.15
RTFDC1-202ENST00000357348 FAN1Q9Y2M0 1017 aa14.11□□□□□ -0.15
RTFDC1-202ENST00000357348 USP17L15C9J2P7 530 aa14.11□□□□□ -0.15
RTFDC1-202ENST00000357348 USP17L13C9JLJ4 530 aa14.11□□□□□ -0.15
RTFDC1-202ENST00000357348 USP17L11C9JVI0 530 aa14.11□□□□□ -0.15
RTFDC1-202ENST00000357348 USP17L18D6R9N7 530 aa14.11□□□□□ -0.15
RTFDC1-202ENST00000357348 USP17L22D6RA61 530 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms