RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 C11orf57Q6ZUT1 292 aaPredicted RBP12.79□□□□□ -0.36
COL9A1-202ENST00000357250 ANKRD42Q8N9B4 389 aa12.79□□□□□ -0.36
COL9A1-202ENST00000357250 POMGNT1Q8WZA1 660 aa12.79□□□□□ -0.36
COL9A1-202ENST00000357250 GJA10Q969M2 543 aa12.79□□□□□ -0.36
COL9A1-202ENST00000357250 MXD3Q9BW11 206 aa12.79□□□□□ -0.36
COL9A1-202ENST00000357250 NACA2Q9H009 215 aa12.79□□□□□ -0.36
COL9A1-202ENST00000357250 GUCY2DQ02846 1103 aa12.78□□□□□ -0.36
COL9A1-202ENST00000357250 MRPL47Q9HD33 250 aaKnown RBP12.78□□□□□ -0.36
COL9A1-202ENST00000357250 DAAM1Q9Y4D1 1078 aa12.78□□□□□ -0.36
COL9A1-202ENST00000357250 SUN1O94901 812 aa12.78□□□□□ -0.36
COL9A1-202ENST00000357250 RBL2Q08999 1139 aa12.78□□□□□ -0.36
COL9A1-202ENST00000357250 SEPT12Q8IYM1 358 aa12.78□□□□□ -0.36
COL9A1-202ENST00000357250 ANKRD35Q8N283 1001 aa12.78□□□□□ -0.36
COL9A1-202ENST00000357250 TTC16Q8NEE8 873 aa12.78□□□□□ -0.36
COL9A1-202ENST00000357250 TBCKQ8TEA7 893 aa12.78□□□□□ -0.36
COL9A1-202ENST00000357250 VCX3AQ9NNX9 186 aa12.78□□□□□ -0.36
COL9A1-202ENST00000357250 MED14O60244 1454 aa12.78□□□□□ -0.36
COL9A1-202ENST00000357250 PPEF1O14829 653 aaPredicted RBP12.78□□□□□ -0.36
COL9A1-202ENST00000357250 SCARF1Q14162 830 aa12.78□□□□□ -0.36
COL9A1-202ENST00000357250 CPSF2Q9P2I0 782 aaKnown RBP12.78□□□□□ -0.36
COL9A1-202ENST00000357250 BAIAP2L1Q9UHR4 511 aa12.78□□□□□ -0.36
COL9A1-202ENST00000357250 ZNF148Q9UQR1 794 aa12.78□□□□□ -0.36
COL9A1-202ENST00000357250 TNS3Q68CZ2 1445 aa12.78□□□□□ -0.36
COL9A1-202ENST00000357250 SERPINB2P05120 415 aa12.78□□□□□ -0.36
COL9A1-202ENST00000357250 IL9RQ01113 521 aa12.78□□□□□ -0.36
COL9A1-202ENST00000357250 RASSF7Q02833 373 aa12.78□□□□□ -0.36
COL9A1-202ENST00000357250 SURF1Q15526 300 aa12.78□□□□□ -0.36
COL9A1-202ENST00000357250 FAM160B2Q86V87 743 aa12.78□□□□□ -0.36
COL9A1-202ENST00000357250 ALDH8A1Q9H2A2 487 aaPredicted RBP12.78□□□□□ -0.36
COL9A1-202ENST00000357250 CNOT10Q9H9A5 744 aaKnown RBP12.78□□□□□ -0.36
COL9A1-202ENST00000357250 SPTLC3Q9NUV7 552 aa12.78□□□□□ -0.36
COL9A1-202ENST00000357250 THRAP3Q9Y2W1 955 aaKnown RBP12.78□□□□□ -0.36
COL9A1-202ENST00000357250 SERPING1P05155 500 aa12.77□□□□□ -0.36
COL9A1-202ENST00000357250 GRM1Q13255 1194 aa12.77□□□□□ -0.36
COL9A1-202ENST00000357250 GSDMBQ8TAX9 411 aa12.77□□□□□ -0.36
COL9A1-202ENST00000357250 WHAMMQ8TF30 809 aa12.77□□□□□ -0.36
COL9A1-202ENST00000357250 SLC7A3Q8WY07 619 aa12.77□□□□□ -0.36
COL9A1-202ENST00000357250 MAGOHBQ96A72 148 aaKnown RBP12.77□□□□□ -0.36
COL9A1-202ENST00000357250 EEF2KMTQ96G04 330 aa12.77□□□□□ -0.36
COL9A1-202ENST00000357250 DPH5Q9H2P9 285 aa12.77□□□□□ -0.36
COL9A1-202ENST00000357250 ZSWIM5Q9P217 1185 aa12.77□□□□□ -0.36
COL9A1-202ENST00000357250 ADD3Q9UEY8 706 aaKnown RBP12.77□□□□□ -0.36
COL9A1-202ENST00000357250 GOLGA8CPA6NN73 597 aa12.77□□□□□ -0.36
COL9A1-202ENST00000357250 HNRNPDLO14979 420 aaKnown RBP12.77□□□□□ -0.36
COL9A1-202ENST00000357250 BPIFA3Q9BQP9 254 aa12.77□□□□□ -0.36
COL9A1-202ENST00000357250 ZNF577Q9BSK1 485 aa12.77□□□□□ -0.36
COL9A1-202ENST00000357250 BSDC1Q9NW68 430 aaPredicted RBP12.77□□□□□ -0.36
COL9A1-202ENST00000357250 CAPN9O14815 690 aa12.77□□□□□ -0.37
COL9A1-202ENST00000357250 BMP3P12645 472 aa12.77□□□□□ -0.37
COL9A1-202ENST00000357250 EIF3BP55884 814 aaKnown RBP12.77□□□□□ -0.37
COL9A1-202ENST00000357250 SLMAPQ14BN4 828 aa12.77□□□□□ -0.37
COL9A1-202ENST00000357250 ALS2CLQ60I27 953 aa12.77□□□□□ -0.37
COL9A1-202ENST00000357250 FOXP4Q8IVH2 680 aaPredicted RBP12.77□□□□□ -0.37
COL9A1-202ENST00000357250 STAG1Q8WVM7 1258 aa12.77□□□□□ -0.37
COL9A1-202ENST00000357250 CCDC127Q96BQ5 260 aa12.77□□□□□ -0.37
COL9A1-202ENST00000357250 PPP1R12CQ9BZL4 782 aa12.77□□□□□ -0.37
COL9A1-202ENST00000357250 TRPC5Q9UL62 973 aaPredicted RBP12.77□□□□□ -0.37
COL9A1-202ENST00000357250 FAM170AA1A519 330 aa12.77□□□□□ -0.37
COL9A1-202ENST00000357250 DLATP10515 647 aaKnown RBP12.77□□□□□ -0.37
COL9A1-202ENST00000357250 CYP19A1P11511 503 aaPredicted RBP12.77□□□□□ -0.37
COL9A1-202ENST00000357250 AP3B2Q13367 1082 aa12.77□□□□□ -0.37
COL9A1-202ENST00000357250 Q9H521 79 aa12.77□□□□□ -0.37
COL9A1-202ENST00000357250 DIS3Q9Y2L1 958 aaKnown RBP12.77□□□□□ -0.37
COL9A1-202ENST00000357250 PIK3CAP42336 1068 aa12.76□□□□□ -0.37
COL9A1-202ENST00000357250 MIPOL1Q8TD10 442 aa12.76□□□□□ -0.37
COL9A1-202ENST00000357250 LRRC8CQ8TDW0 803 aa12.76□□□□□ -0.37
COL9A1-202ENST00000357250 LCMT1Q9UIC8 334 aa12.76□□□□□ -0.37
COL9A1-202ENST00000357250 LRRIQ4A6NIV6 560 aa12.76□□□□□ -0.37
COL9A1-202ENST00000357250 CCNA1P78396 465 aa12.76□□□□□ -0.37
COL9A1-202ENST00000357250 CELF1Q92879 486 aaKnown RBP12.76□□□□□ -0.37
COL9A1-202ENST00000357250 GDAP1L1Q96MZ0 367 aa12.76□□□□□ -0.37
COL9A1-202ENST00000357250 DBNDD1Q9H9R9 158 aa12.76□□□□□ -0.37
COL9A1-202ENST00000357250 PDE11AQ9HCR9 933 aa12.76□□□□□ -0.37
COL9A1-202ENST00000357250 PI4KBQ9UBF8 816 aa12.76□□□□□ -0.37
COL9A1-202ENST00000357250 CAPN7Q9Y6W3 813 aa12.76□□□□□ -0.37
COL9A1-202ENST00000357250 NDUFA10O95299 355 aa12.76□□□□□ -0.37
COL9A1-202ENST00000357250 PTPREP23469 700 aa12.76□□□□□ -0.37
COL9A1-202ENST00000357250 CYP4A11Q02928 519 aa12.76□□□□□ -0.37
COL9A1-202ENST00000357250 METTL13Q8N6R0 699 aa12.76□□□□□ -0.37
COL9A1-202ENST00000357250 EXOC4Q96A65 974 aa12.76□□□□□ -0.37
COL9A1-202ENST00000357250 IL25Q9H293 177 aa12.76□□□□□ -0.37
COL9A1-202ENST00000357250 IPO11Q9UI26 975 aaKnown RBP12.76□□□□□ -0.37
COL9A1-202ENST00000357250 AFG3L2Q9Y4W6 797 aa12.76□□□□□ -0.37
COL9A1-202ENST00000357250 PALM3A6NDB9 673 aaPredicted RBP12.76□□□□□ -0.37
COL9A1-202ENST00000357250 GLE1Q53GS7 698 aaKnown RBP12.76□□□□□ -0.37
COL9A1-202ENST00000357250 MUM1L1Q5H9M0 696 aa12.76□□□□□ -0.37
COL9A1-202ENST00000357250 EPSTI1Q96J88 318 aa12.76□□□□□ -0.37
COL9A1-202ENST00000357250 STRBPQ96SI9 672 aaKnown RBP12.76□□□□□ -0.37
COL9A1-202ENST00000357250 EMILIN3Q9NT22 766 aa12.76□□□□□ -0.37
COL9A1-202ENST00000357250 INTS9Q9NV88 658 aaKnown RBP12.76□□□□□ -0.37
COL9A1-202ENST00000357250 NRKQ7Z2Y5 1582 aa12.75□□□□□ -0.37
COL9A1-202ENST00000357250 PNMA6FA0A0J9YX94 578 aa12.75□□□□□ -0.37
COL9A1-202ENST00000357250 CCDC188H7C350 402 aa12.75□□□□□ -0.37
COL9A1-202ENST00000357250 HEXIM1O94992 359 aaKnown RBP12.75□□□□□ -0.37
COL9A1-202ENST00000357250 CYP2E1P05181 493 aaPredicted RBP12.75□□□□□ -0.37
COL9A1-202ENST00000357250 GABPAQ06546 454 aa12.75□□□□□ -0.37
COL9A1-202ENST00000357250 RPS6KA2Q15349 733 aa12.75□□□□□ -0.37
COL9A1-202ENST00000357250 ALX1Q15699 326 aa12.75□□□□□ -0.37
COL9A1-202ENST00000357250 RESP18Q5W5W9 173 aa12.75□□□□□ -0.37
COL9A1-202ENST00000357250 CLEC17AQ6ZS10 378 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms