RNA–Protein interactions for RNA: ENST00000355683.9

STRN3-201, Transcript of striatin 3, humanhuman

TSL 1 (best) BASIC

Gene STRN3, Length 3,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-201ENST00000355683 TTC16Q8NEE8 873 aa16.72■□□□□ 0.27
STRN3-201ENST00000355683 FLAD1Q8NFF5 587 aa16.72■□□□□ 0.27
STRN3-201ENST00000355683 CAPN7Q9Y6W3 813 aa16.72■□□□□ 0.27
STRN3-201ENST00000355683 ZNF211Q13398 564 aaPredicted RBP16.71■□□□□ 0.27
STRN3-201ENST00000355683 MON2Q7Z3U7 1717 aa16.71■□□□□ 0.27
STRN3-201ENST00000355683 SPOPO43791 374 aa16.71■□□□□ 0.27
STRN3-201ENST00000355683 MMP10P09238 476 aa16.71■□□□□ 0.27
STRN3-201ENST00000355683 DLATP10515 647 aaKnown RBP16.71■□□□□ 0.27
STRN3-201ENST00000355683 COPB2P35606 906 aa16.71■□□□□ 0.27
STRN3-201ENST00000355683 NAA25Q14CX7 972 aa16.71■□□□□ 0.27
STRN3-201ENST00000355683 TRIM65Q6PJ69 517 aa16.71■□□□□ 0.27
STRN3-201ENST00000355683 MED1Q15648 1581 aaPredicted RBP16.71■□□□□ 0.27
STRN3-201ENST00000355683 A0A1B0GTH6 734 aa16.71■□□□□ 0.27
STRN3-201ENST00000355683 CCDC151A5D8V7 595 aa16.71■□□□□ 0.27
STRN3-201ENST00000355683 DCAF8L1A6NGE4 600 aa16.71■□□□□ 0.27
STRN3-201ENST00000355683 KRT71Q3SY84 523 aa16.71■□□□□ 0.27
STRN3-201ENST00000355683 PANX2Q96RD6 677 aa16.71■□□□□ 0.27
STRN3-201ENST00000355683 LRRC1Q9BTT6 524 aa16.71■□□□□ 0.27
STRN3-201ENST00000355683 PCDHA13Q9Y5I0 950 aa16.71■□□□□ 0.27
STRN3-201ENST00000355683 VIMP08670 466 aaKnown RBP16.7■□□□□ 0.26
STRN3-201ENST00000355683 XRCC5P13010 732 aaKnown RBP16.7■□□□□ 0.26
STRN3-201ENST00000355683 TNFAIP3P21580 790 aa16.7■□□□□ 0.26
STRN3-201ENST00000355683 RIOK1Q9BRS2 568 aaKnown RBP16.7■□□□□ 0.26
STRN3-201ENST00000355683 FHOD1Q9Y613 1164 aa16.7■□□□□ 0.26
STRN3-201ENST00000355683 CDHR2Q9BYE9 1310 aa16.7■□□□□ 0.26
STRN3-201ENST00000355683 FRMD3A2A2Y4 597 aa16.7■□□□□ 0.26
STRN3-201ENST00000355683 ZBTB7AO95365 584 aa16.7■□□□□ 0.26
STRN3-201ENST00000355683 ALAS1P13196 640 aa16.7■□□□□ 0.26
STRN3-201ENST00000355683 TRIM14Q14142 442 aa16.7■□□□□ 0.26
STRN3-201ENST00000355683 TRIP13Q15645 432 aaPredicted RBP16.7■□□□□ 0.26
STRN3-201ENST00000355683 WHAMMP3Q1A5X7 153 aa16.7■□□□□ 0.26
STRN3-201ENST00000355683 GRIPAP1Q4V328 841 aa16.7■□□□□ 0.26
STRN3-201ENST00000355683 COG1Q8WTW3 980 aa16.7■□□□□ 0.26
STRN3-201ENST00000355683 TEKT1Q969V4 418 aa16.7■□□□□ 0.26
STRN3-201ENST00000355683 THOC1Q96FV9 657 aaKnown RBP16.7■□□□□ 0.26
STRN3-201ENST00000355683 MTM1Q13496 603 aa16.7■□□□□ 0.26
STRN3-201ENST00000355683 ALX1Q15699 326 aa16.7■□□□□ 0.26
STRN3-201ENST00000355683 BRIP1Q9BX63 1249 aa16.7■□□□□ 0.26
STRN3-201ENST00000355683 MLXIPLQ9NP71 852 aa16.7■□□□□ 0.26
STRN3-201ENST00000355683 KRIT1O00522 736 aa16.7■□□□□ 0.26
STRN3-201ENST00000355683 MAP3K9P80192 1104 aa16.7■□□□□ 0.26
STRN3-201ENST00000355683 BIRC3Q13489 604 aa16.7■□□□□ 0.26
STRN3-201ENST00000355683 CFAP221Q4G0U5 840 aa16.7■□□□□ 0.26
STRN3-201ENST00000355683 PEAK1Q9H792 1746 aa16.69■□□□□ 0.26
STRN3-201ENST00000355683 TESPA1A2RU30 521 aaPredicted RBP16.69■□□□□ 0.26
STRN3-201ENST00000355683 ZSCAN5CA6NGD5 496 aaPredicted RBP16.69■□□□□ 0.26
STRN3-201ENST00000355683 H0YIN7 160 aa16.69■□□□□ 0.26
STRN3-201ENST00000355683 H3BQF6 201 aa16.69■□□□□ 0.26
STRN3-201ENST00000355683 EPB41P11171 864 aaKnown RBP16.69■□□□□ 0.26
STRN3-201ENST00000355683 C12orf60Q5U649 245 aa16.69■□□□□ 0.26
STRN3-201ENST00000355683 DDX42Q86XP3 938 aaKnown RBP eCLIP16.69■□□□□ 0.26
STRN3-201ENST00000355683 PPM1KQ8N3J5 372 aa16.69■□□□□ 0.26
STRN3-201ENST00000355683 ZNF526Q8TF50 670 aaPredicted RBP16.69■□□□□ 0.26
STRN3-201ENST00000355683 NUDT12Q9BQG2 462 aa16.69■□□□□ 0.26
STRN3-201ENST00000355683 CNTNAP5Q8WYK1 1306 aa16.69■□□□□ 0.26
STRN3-201ENST00000355683 LGALS16A8MUM7 142 aa16.69■□□□□ 0.26
STRN3-201ENST00000355683 MYO1CO00159 1063 aa16.69■□□□□ 0.26
STRN3-201ENST00000355683 PALMO75781 387 aa16.69■□□□□ 0.26
STRN3-201ENST00000355683 SNX1Q13596 522 aa16.69■□□□□ 0.26
STRN3-201ENST00000355683 TRIM9Q9C026 710 aa16.69■□□□□ 0.26
STRN3-201ENST00000355683 EMILIN3Q9NT22 766 aa16.69■□□□□ 0.26
STRN3-201ENST00000355683 ARHGEF35A5YM69 484 aa16.69■□□□□ 0.26
STRN3-201ENST00000355683 MYMKA6NI61 221 aa16.69■□□□□ 0.26
STRN3-201ENST00000355683 TBC1D8O95759 1140 aa16.69■□□□□ 0.26
STRN3-201ENST00000355683 GJB7Q6PEY0 223 aa16.69■□□□□ 0.26
STRN3-201ENST00000355683 OR2W6PQ8NHA6 318 aa16.69■□□□□ 0.26
STRN3-201ENST00000355683 BPIFA3Q9BQP9 254 aa16.69■□□□□ 0.26
STRN3-201ENST00000355683 SELENOOQ9BVL4 669 aa16.69■□□□□ 0.26
STRN3-201ENST00000355683 NARFQ9UHQ1 456 aa16.69■□□□□ 0.26
STRN3-201ENST00000355683 GH2P01242 217 aa16.68■□□□□ 0.26
STRN3-201ENST00000355683 PLA2G4BP0C869 781 aa16.68■□□□□ 0.26
STRN3-201ENST00000355683 CTNNA2P26232 953 aa16.68■□□□□ 0.26
STRN3-201ENST00000355683 TRIM58Q8NG06 486 aa16.68■□□□□ 0.26
STRN3-201ENST00000355683 CSRNP1Q96S65 589 aa16.68■□□□□ 0.26
STRN3-201ENST00000355683 TACO1Q9BSH4 297 aaKnown RBP16.68■□□□□ 0.26
STRN3-201ENST00000355683 NFAT5O94916 1531 aa16.68■□□□□ 0.26
STRN3-201ENST00000355683 SLC37A4O43826 429 aa16.68■□□□□ 0.26
STRN3-201ENST00000355683 TRIM49P0CI25 452 aa16.68■□□□□ 0.26
STRN3-201ENST00000355683 TRIM49CP0CI26 452 aa16.68■□□□□ 0.26
STRN3-201ENST00000355683 ANKRD42Q8N9B4 389 aa16.68■□□□□ 0.26
STRN3-201ENST00000355683 PPM1EQ8WY54 764 aa16.68■□□□□ 0.26
STRN3-201ENST00000355683 DDX47Q9H0S4 455 aaKnown RBP16.68■□□□□ 0.26
STRN3-201ENST00000355683 GAS7O60861 476 aa16.68■□□□□ 0.26
STRN3-201ENST00000355683 KRT14P02533 472 aa16.68■□□□□ 0.26
STRN3-201ENST00000355683 FGFR2P21802 821 aa16.68■□□□□ 0.26
STRN3-201ENST00000355683 ACTN2P35609 894 aa16.68■□□□□ 0.26
STRN3-201ENST00000355683 DHX9Q08211 1270 aaKnown RBP16.68■□□□□ 0.26
STRN3-201ENST00000355683 MESDQ14696 234 aa16.68■□□□□ 0.26
STRN3-201ENST00000355683 SHROOM1Q2M3G4 852 aaPredicted RBP16.68■□□□□ 0.26
STRN3-201ENST00000355683 ODR4Q5SWX8 454 aa16.68■□□□□ 0.26
STRN3-201ENST00000355683 FOXR1Q6PIV2 292 aa16.68■□□□□ 0.26
STRN3-201ENST00000355683 POTEAQ6S8J7 498 aa16.68■□□□□ 0.26
STRN3-201ENST00000355683 CABS1Q96KC9 395 aa16.68■□□□□ 0.26
STRN3-201ENST00000355683 EHD4Q9H223 541 aa16.68■□□□□ 0.26
STRN3-201ENST00000355683 PPIP5K2O43314 1243 aa16.67■□□□□ 0.26
STRN3-201ENST00000355683 CTNNA1P35221 906 aaKnown RBP16.67■□□□□ 0.26
STRN3-201ENST00000355683 ZBED6P86452 979 aa16.67■□□□□ 0.26
STRN3-201ENST00000355683 CETN1Q12798 172 aa16.67■□□□□ 0.26
STRN3-201ENST00000355683 SEC23AQ15436 765 aa16.67■□□□□ 0.26
STRN3-201ENST00000355683 EXOC3L4Q17RC7 722 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms