RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 TTBK2Q6IQ55 1244 aa13.75□□□□□ -0.21
SYNCRIP-201ENST00000355238 SCYL2Q6P3W7 929 aa13.75□□□□□ -0.21
SYNCRIP-201ENST00000355238 PROCA1Q8NCQ7 364 aaPredicted RBP13.75□□□□□ -0.21
SYNCRIP-201ENST00000355238 KIFC3Q9BVG8 833 aa13.75□□□□□ -0.21
SYNCRIP-201ENST00000355238 AP1M1Q9BXS5 423 aa13.75□□□□□ -0.21
SYNCRIP-201ENST00000355238 ECT2Q9H8V3 914 aa13.75□□□□□ -0.21
SYNCRIP-201ENST00000355238 ST7Q9NRC1 585 aa13.75□□□□□ -0.21
SYNCRIP-201ENST00000355238 NUB1Q9Y5A7 615 aa13.75□□□□□ -0.21
SYNCRIP-201ENST00000355238 SPATA31E1Q6ZUB1 1445 aa13.75□□□□□ -0.21
SYNCRIP-201ENST00000355238 GNGT2O14610 69 aa13.75□□□□□ -0.21
SYNCRIP-201ENST00000355238 CCDC144BQ3MJ40 725 aa13.75□□□□□ -0.21
SYNCRIP-201ENST00000355238 MUM1L1Q5H9M0 696 aa13.75□□□□□ -0.21
SYNCRIP-201ENST00000355238 MAML1Q92585 1016 aa13.75□□□□□ -0.21
SYNCRIP-201ENST00000355238 FAM96AQ9H5X1 160 aa13.75□□□□□ -0.21
SYNCRIP-201ENST00000355238 TTLL3Q9Y4R7 772 aa13.75□□□□□ -0.21
SYNCRIP-201ENST00000355238 PDE6AP16499 860 aa13.75□□□□□ -0.21
SYNCRIP-201ENST00000355238 GRAMD1CQ8IYS0 662 aa13.75□□□□□ -0.21
SYNCRIP-201ENST00000355238 OSBPL9Q96SU4 736 aa13.75□□□□□ -0.21
SYNCRIP-201ENST00000355238 GRID2IPA4D2P6 1211 aa13.75□□□□□ -0.21
SYNCRIP-201ENST00000355238 CPP00450 1065 aa13.75□□□□□ -0.21
SYNCRIP-201ENST00000355238 MCF2P10911 925 aa13.75□□□□□ -0.21
SYNCRIP-201ENST00000355238 ZSCAN20P17040 1043 aaPredicted RBP13.75□□□□□ -0.21
SYNCRIP-201ENST00000355238 ARMCX5Q6P1M9 558 aa13.75□□□□□ -0.21
SYNCRIP-201ENST00000355238 SLC30A9Q6PML9 568 aa13.75□□□□□ -0.21
SYNCRIP-201ENST00000355238 PAGE5Q96GU1 130 aa13.75□□□□□ -0.21
SYNCRIP-201ENST00000355238 LRRC37BQ96QE4 947 aa13.75□□□□□ -0.21
SYNCRIP-201ENST00000355238 TRIM56Q9BRZ2 755 aaKnown RBP13.75□□□□□ -0.21
SYNCRIP-201ENST00000355238 TRIM15Q9C019 465 aa13.75□□□□□ -0.21
SYNCRIP-201ENST00000355238 PYGBP11216 843 aa13.75□□□□□ -0.21
SYNCRIP-201ENST00000355238 PSMD2Q13200 908 aa13.75□□□□□ -0.21
SYNCRIP-201ENST00000355238 UBE3CQ15386 1083 aa13.75□□□□□ -0.21
SYNCRIP-201ENST00000355238 PNMA1Q8ND90 353 aa13.75□□□□□ -0.21
SYNCRIP-201ENST00000355238 NT5C1BQ96P26 610 aa13.75□□□□□ -0.21
SYNCRIP-201ENST00000355238 FAM170AA1A519 330 aa13.74□□□□□ -0.21
SYNCRIP-201ENST00000355238 USP27XA6NNY8 438 aa13.74□□□□□ -0.21
SYNCRIP-201ENST00000355238 RAD23BP54727 409 aa13.74□□□□□ -0.21
SYNCRIP-201ENST00000355238 CRLF3Q8IUI8 442 aa13.74□□□□□ -0.21
SYNCRIP-201ENST00000355238 GRAMD1AQ96CP6 724 aa13.74□□□□□ -0.21
SYNCRIP-201ENST00000355238 EEF2KMTQ96G04 330 aa13.74□□□□□ -0.21
SYNCRIP-201ENST00000355238 NDST4Q9H3R1 872 aa13.74□□□□□ -0.21
SYNCRIP-201ENST00000355238 PSTPIP2Q9H939 334 aa13.74□□□□□ -0.21
SYNCRIP-201ENST00000355238 TNRQ92752 1358 aa13.74□□□□□ -0.21
SYNCRIP-201ENST00000355238 KPNA2P52292 529 aaKnown RBP13.74□□□□□ -0.21
SYNCRIP-201ENST00000355238 KCNV2Q8TDN2 545 aa13.74□□□□□ -0.21
SYNCRIP-201ENST00000355238 UHRF1BP1LA0JNW5 1464 aa13.74□□□□□ -0.21
SYNCRIP-201ENST00000355238 TOM1L1O75674 476 aa13.74□□□□□ -0.21
SYNCRIP-201ENST00000355238 HNRNPCP07910 306 aaKnown RBP eCLIP13.74□□□□□ -0.211e-6■■■□□ 18.5
SYNCRIP-201ENST00000355238 PLS3P13797 630 aa13.74□□□□□ -0.21
SYNCRIP-201ENST00000355238 HDLBPQ00341 1268 aaKnown RBP13.74□□□□□ -0.21
SYNCRIP-201ENST00000355238 CENPUQ71F23 418 aa13.74□□□□□ -0.21
SYNCRIP-201ENST00000355238 CADPS2Q86UW7 1296 aa13.74□□□□□ -0.21
SYNCRIP-201ENST00000355238 CALR3Q96L12 384 aaKnown RBP13.74□□□□□ -0.21
SYNCRIP-201ENST00000355238 ZNF277Q9NRM2 450 aaPredicted RBP13.74□□□□□ -0.21
SYNCRIP-201ENST00000355238 STXBP3O00186 592 aa13.74□□□□□ -0.21
SYNCRIP-201ENST00000355238 GAP43P17677 238 aa13.74□□□□□ -0.21
SYNCRIP-201ENST00000355238 PDE6BP35913 854 aa13.74□□□□□ -0.21
SYNCRIP-201ENST00000355238 TEX9Q8N6V9 391 aa13.74□□□□□ -0.21
SYNCRIP-201ENST00000355238 PFDN6O15212 129 aa13.74□□□□□ -0.21
SYNCRIP-201ENST00000355238 LARGE1O95461 756 aa13.74□□□□□ -0.21
SYNCRIP-201ENST00000355238 ZFXP17010 805 aaPredicted RBP13.74□□□□□ -0.21
SYNCRIP-201ENST00000355238 CDR2Q01850 454 aa13.74□□□□□ -0.21
SYNCRIP-201ENST00000355238 RESP18Q5W5W9 173 aa13.74□□□□□ -0.21
SYNCRIP-201ENST00000355238 PCDHA4Q9UN74 947 aa13.74□□□□□ -0.21
SYNCRIP-201ENST00000355238 USP17L12C9JPN9 530 aa13.73□□□□□ -0.21
SYNCRIP-201ENST00000355238 USP17L21D6R901 530 aa13.73□□□□□ -0.21
SYNCRIP-201ENST00000355238 LRRC63Q05C16 580 aa13.73□□□□□ -0.21
SYNCRIP-201ENST00000355238 TAF12Q16514 161 aa13.73□□□□□ -0.21
SYNCRIP-201ENST00000355238 RFX6Q8HWS3 928 aa13.73□□□□□ -0.21
SYNCRIP-201ENST00000355238 ZC3H15Q8WU90 426 aaKnown RBP13.73□□□□□ -0.21
SYNCRIP-201ENST00000355238 GJA10Q969M2 543 aa13.73□□□□□ -0.21
SYNCRIP-201ENST00000355238 SLC52A2Q9HAB3 445 aa13.73□□□□□ -0.21
SYNCRIP-201ENST00000355238 MKRN3Q13064 507 aaKnown RBP13.73□□□□□ -0.21
SYNCRIP-201ENST00000355238 USH1GQ495M9 461 aa13.73□□□□□ -0.21
SYNCRIP-201ENST00000355238 RAPH1Q70E73 1250 aa13.73□□□□□ -0.21
SYNCRIP-201ENST00000355238 RAB44Q7Z6P3 723 aaPredicted RBP13.73□□□□□ -0.21
SYNCRIP-201ENST00000355238 IPO11Q9UI26 975 aaKnown RBP13.73□□□□□ -0.21
SYNCRIP-201ENST00000355238 HAUS5O94927 633 aa13.73□□□□□ -0.21
SYNCRIP-201ENST00000355238 MYCLP12524 364 aaPredicted RBP13.73□□□□□ -0.21
SYNCRIP-201ENST00000355238 NCF2P19878 526 aaPredicted RBP13.73□□□□□ -0.21
SYNCRIP-201ENST00000355238 ANO5Q75V66 913 aa13.73□□□□□ -0.21
SYNCRIP-201ENST00000355238 RHOT2Q8IXI1 618 aa13.73□□□□□ -0.21
SYNCRIP-201ENST00000355238 SLC17A8Q8NDX2 589 aa13.73□□□□□ -0.21
SYNCRIP-201ENST00000355238 RIOK1Q9BRS2 568 aaKnown RBP13.73□□□□□ -0.21
SYNCRIP-201ENST00000355238 EPN3Q9H201 632 aa13.73□□□□□ -0.21
SYNCRIP-201ENST00000355238 ETNK1Q9HBU6 452 aa13.73□□□□□ -0.21
SYNCRIP-201ENST00000355238 MRPL47Q9HD33 250 aaKnown RBP13.73□□□□□ -0.21
SYNCRIP-201ENST00000355238 GPR108Q9NPR9 543 aa13.73□□□□□ -0.21
SYNCRIP-201ENST00000355238 MCF2LO15068 1137 aa13.73□□□□□ -0.21
SYNCRIP-201ENST00000355238 CFBP00751 764 aa13.73□□□□□ -0.21
SYNCRIP-201ENST00000355238 CAV1Q03135 178 aa13.73□□□□□ -0.21
SYNCRIP-201ENST00000355238 WDR75Q8IWA0 830 aaKnown RBP13.73□□□□□ -0.21
SYNCRIP-201ENST00000355238 DEPTORQ8TB45 409 aa13.73□□□□□ -0.21
SYNCRIP-201ENST00000355238 ADGRG1Q9Y653 693 aa13.73□□□□□ -0.21
SYNCRIP-201ENST00000355238 ACSL3O95573 720 aa13.73□□□□□ -0.21
SYNCRIP-201ENST00000355238 LIG4P49917 911 aa13.73□□□□□ -0.21
SYNCRIP-201ENST00000355238 C1orf146Q5VVC0 180 aa13.73□□□□□ -0.21
SYNCRIP-201ENST00000355238 FAM186BQ8IYM0 893 aa13.73□□□□□ -0.21
SYNCRIP-201ENST00000355238 COPRSQ9NQ92 184 aa13.73□□□□□ -0.21
SYNCRIP-201ENST00000355238 NDE1Q9NXR1 346 aa13.73□□□□□ -0.21
SYNCRIP-201ENST00000355238 KDM5AP29375 1690 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms