RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 USP17L6PQ6QN14 398 aa24.72■■□□□ 1.55
NKX2-1-201ENST00000354822 CCDC65Q8IXS2 484 aa24.72■■□□□ 1.55
NKX2-1-201ENST00000354822 MSANTD4Q8NCY6 345 aa24.72■■□□□ 1.55
NKX2-1-201ENST00000354822 HNRNPLLQ8WVV9 542 aaKnown RBP24.72■■□□□ 1.55
NKX2-1-201ENST00000354822 AMNQ9BXJ7 453 aa24.72■■□□□ 1.55
NKX2-1-201ENST00000354822 ZSWIM4Q9H7M6 989 aa24.72■■□□□ 1.55
NKX2-1-201ENST00000354822 SIK3Q9Y2K2 1263 aa24.72■■□□□ 1.55
NKX2-1-201ENST00000354822 SCN9AQ15858 1988 aa24.72■■□□□ 1.55
NKX2-1-201ENST00000354822 FKBP3Q00688 224 aaKnown RBP24.71■■□□□ 1.55
NKX2-1-201ENST00000354822 ICA1Q05084 483 aa24.71■■□□□ 1.55
NKX2-1-201ENST00000354822 COASYQ13057 564 aa24.71■■□□□ 1.55
NKX2-1-201ENST00000354822 ARHGAP27Q6ZUM4 889 aa24.71■■□□□ 1.55
NKX2-1-201ENST00000354822 JAKMIP2Q96AA8 810 aa24.71■■□□□ 1.55
NKX2-1-201ENST00000354822 GMCL1Q96IK5 515 aa24.71■■□□□ 1.55
NKX2-1-201ENST00000354822 EDEM3Q9BZQ6 932 aa24.71■■□□□ 1.55
NKX2-1-201ENST00000354822 TSGA10Q9BZW7 698 aa24.71■■□□□ 1.55
NKX2-1-201ENST00000354822 ZNF219Q9P2Y4 722 aaPredicted RBP24.71■■□□□ 1.55
NKX2-1-201ENST00000354822 STK24Q9Y6E0 443 aa24.71■■□□□ 1.55
NKX2-1-201ENST00000354822 CACNB3P54284 484 aa24.71■■□□□ 1.55
NKX2-1-201ENST00000354822 EN1Q05925 392 aaPredicted RBP24.71■■□□□ 1.55
NKX2-1-201ENST00000354822 LRRC55Q6ZSA7 311 aa24.71■■□□□ 1.55
NKX2-1-201ENST00000354822 C7orf43Q8WVR3 580 aa24.71■■□□□ 1.55
NKX2-1-201ENST00000354822 CCDC42Q96M95 316 aa24.71■■□□□ 1.55
NKX2-1-201ENST00000354822 RAB21Q9UL25 225 aa24.71■■□□□ 1.55
NKX2-1-201ENST00000354822 TBX3O15119 743 aa24.7■■□□□ 1.55
NKX2-1-201ENST00000354822 PLA2G4AP47712 749 aa24.7■■□□□ 1.55
NKX2-1-201ENST00000354822 SPA17Q15506 151 aa24.7■■□□□ 1.55
NKX2-1-201ENST00000354822 FAM26FQ5R3K3 315 aa24.7■■□□□ 1.55
NKX2-1-201ENST00000354822 SH3BP5LQ7L8J4 393 aa24.7■■□□□ 1.55
NKX2-1-201ENST00000354822 SIAH1Q8IUQ4 282 aa24.7■■□□□ 1.55
NKX2-1-201ENST00000354822 KIAA1024Q9UPX6 916 aa24.7■■□□□ 1.55
NKX2-1-201ENST00000354822 F5H6K3 240 aa24.7■■□□□ 1.54
NKX2-1-201ENST00000354822 TBC1D8O95759 1140 aa24.7■■□□□ 1.54
NKX2-1-201ENST00000354822 FOSP01100 380 aaPredicted RBP24.7■■□□□ 1.54
NKX2-1-201ENST00000354822 KLRC3Q07444 240 aa24.7■■□□□ 1.54
NKX2-1-201ENST00000354822 TERF2Q15554 542 aa24.7■■□□□ 1.54
NKX2-1-201ENST00000354822 ABCB5Q2M3G0 1257 aa24.7■■□□□ 1.54
NKX2-1-201ENST00000354822 CC2D2BQ6DHV5 1058 aa24.7■■□□□ 1.54
NKX2-1-201ENST00000354822 TRAPPC11Q7Z392 1133 aa24.7■■□□□ 1.54
NKX2-1-201ENST00000354822 MEIS2O14770 477 aa24.69■■□□□ 1.54
NKX2-1-201ENST00000354822 ENTPD3O75355 529 aa24.69■■□□□ 1.54
NKX2-1-201ENST00000354822 SEC31AO94979 1220 aaKnown RBP24.69■■□□□ 1.54
NKX2-1-201ENST00000354822 GNA14O95837 355 aa24.69■■□□□ 1.54
NKX2-1-201ENST00000354822 PLA2G4BP0C869 781 aa24.69■■□□□ 1.54
NKX2-1-201ENST00000354822 HAUS3Q68CZ6 603 aa24.69■■□□□ 1.54
NKX2-1-201ENST00000354822 CEP63Q96MT8 703 aa24.69■■□□□ 1.54
NKX2-1-201ENST00000354822 ANKZF1Q9H8Y5 726 aa24.69■■□□□ 1.54
NKX2-1-201ENST00000354822 TRIM10Q9UDY6 481 aa24.69■■□□□ 1.54
NKX2-1-201ENST00000354822 ERLIN1O75477 346 aa24.69■■□□□ 1.54
NKX2-1-201ENST00000354822 SLURP2P0DP57 97 aa24.69■■□□□ 1.54
NKX2-1-201ENST00000354822 KIF5AQ12840 1032 aa24.69■■□□□ 1.54
NKX2-1-201ENST00000354822 ZCWPW2Q504Y3 356 aa24.69■■□□□ 1.54
NKX2-1-201ENST00000354822 PAPD7Q5XG87 772 aaKnown RBP24.69■■□□□ 1.54
NKX2-1-201ENST00000354822 CRYGNQ8WXF5 182 aa24.69■■□□□ 1.54
NKX2-1-201ENST00000354822 SYNPO2Q9UMS6 1093 aa24.69■■□□□ 1.54
NKX2-1-201ENST00000354822 SIPA1L1O43166 1804 aa24.68■■□□□ 1.54
NKX2-1-201ENST00000354822 FAM196BA6NMK8 535 aa24.68■■□□□ 1.54
NKX2-1-201ENST00000354822 VAV2P52735 878 aa24.68■■□□□ 1.54
NKX2-1-201ENST00000354822 Q4G0T1 1027 aa24.68■■□□□ 1.54
NKX2-1-201ENST00000354822 SUPT20HQ8NEM7 779 aa24.68■■□□□ 1.54
NKX2-1-201ENST00000354822 MMRN2Q9H8L6 949 aa24.68■■□□□ 1.54
NKX2-1-201ENST00000354822 RGS17Q9UGC6 210 aaPredicted RBP24.68■■□□□ 1.54
NKX2-1-201ENST00000354822 PCDHAC2Q9Y5I4 1007 aa24.68■■□□□ 1.54
NKX2-1-201ENST00000354822 COL4A3BPQ9Y5P4 624 aa24.68■■□□□ 1.54
NKX2-1-201ENST00000354822 SAR1BQ9Y6B6 198 aa24.68■■□□□ 1.54
NKX2-1-201ENST00000354822 SSBP05455 408 aaKnown RBP eCLIP24.67■■□□□ 1.54
NKX2-1-201ENST00000354822 ARHGAP4P98171 946 aa24.67■■□□□ 1.54
NKX2-1-201ENST00000354822 LRRC41Q15345 812 aa24.67■■□□□ 1.54
NKX2-1-201ENST00000354822 FBXO11Q86XK2 927 aa24.67■■□□□ 1.54
NKX2-1-201ENST00000354822 TEX2Q8IWB9 1127 aa24.67■■□□□ 1.54
NKX2-1-201ENST00000354822 ERMNQ8TAM6 284 aa24.67■■□□□ 1.54
NKX2-1-201ENST00000354822 PITPNM2Q9BZ72 1349 aa24.67■■□□□ 1.54
NKX2-1-201ENST00000354822 ANO9A1A5B4 782 aa24.67■■□□□ 1.54
NKX2-1-201ENST00000354822 USO1O60763 962 aaKnown RBP24.67■■□□□ 1.54
NKX2-1-201ENST00000354822 AOC3Q16853 763 aa24.67■■□□□ 1.54
NKX2-1-201ENST00000354822 GJA10Q969M2 543 aa24.67■■□□□ 1.54
NKX2-1-201ENST00000354822 RPGRIP1Q96KN7 1286 aa24.67■■□□□ 1.54
NKX2-1-201ENST00000354822 ATRNL1Q5VV63 1379 aa24.67■■□□□ 1.54
NKX2-1-201ENST00000354822 E9PMD0 336 aa24.66■■□□□ 1.54
NKX2-1-201ENST00000354822 MMP14P50281 582 aa24.66■■□□□ 1.54
NKX2-1-201ENST00000354822 RBM26Q5T8P6 1007 aaKnown RBP24.66■■□□□ 1.54
NKX2-1-201ENST00000354822 POTEAQ6S8J7 498 aa24.66■■□□□ 1.54
NKX2-1-201ENST00000354822 PURBQ96QR8 312 aaKnown RBP24.66■■□□□ 1.54
NKX2-1-201ENST00000354822 GBP3Q9H0R5 595 aa24.66■■□□□ 1.54
NKX2-1-201ENST00000354822 NUCKS1Q9H1E3 243 aaKnown RBP24.66■■□□□ 1.54
NKX2-1-201ENST00000354822 SPDYE3A6NKU9 549 aa24.66■■□□□ 1.54
NKX2-1-201ENST00000354822 TRAF5O00463 557 aa24.66■■□□□ 1.54
NKX2-1-201ENST00000354822 NKRFO15226 690 aaKnown RBP eCLIP24.66■■□□□ 1.54
NKX2-1-201ENST00000354822 LONRF2Q1L5Z9 754 aa24.66■■□□□ 1.54
NKX2-1-201ENST00000354822 SYDE2Q5VT97 1194 aa24.66■■□□□ 1.54
NKX2-1-201ENST00000354822 GPBP1Q86WP2 473 aa24.66■■□□□ 1.54
NKX2-1-201ENST00000354822 FAM20AQ96MK3 541 aa24.66■■□□□ 1.54
NKX2-1-201ENST00000354822 FUT8Q9BYC5 575 aa24.66■■□□□ 1.54
NKX2-1-201ENST00000354822 FAM207AQ9NSI2 230 aaPredicted RBP24.66■■□□□ 1.54
NKX2-1-201ENST00000354822 PRDM4Q9UKN5 801 aa24.66■■□□□ 1.54
NKX2-1-201ENST00000354822 PCDHA2Q9Y5H9 948 aa24.66■■□□□ 1.54
NKX2-1-201ENST00000354822 LCA5LO95447 670 aa24.65■■□□□ 1.54
NKX2-1-201ENST00000354822 TRAF1Q13077 416 aa24.65■■□□□ 1.54
NKX2-1-201ENST00000354822 BTNL9Q6UXG8 535 aa24.65■■□□□ 1.54
NKX2-1-201ENST00000354822 NEK11Q8NG66 645 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms