RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 A0A0U1RQG5 324 aaPredicted RBP21.68■■□□□ 1.06
COL13A1-201ENST00000354547 A0A1W2PQJ5 194 aa21.68■■□□□ 1.06
COL13A1-201ENST00000354547 BBOX1O75936 387 aa21.68■■□□□ 1.06
COL13A1-201ENST00000354547 STAT3P40763 770 aa21.68■■□□□ 1.06
COL13A1-201ENST00000354547 MAGEA1P43355 309 aa21.68■■□□□ 1.06
COL13A1-201ENST00000354547 SLC7A5Q01650 507 aa21.68■■□□□ 1.06
COL13A1-201ENST00000354547 MYOCDQ8IZQ8 938 aa21.68■■□□□ 1.06
COL13A1-201ENST00000354547 HDAC7Q8WUI4 952 aa21.68■■□□□ 1.06
COL13A1-201ENST00000354547 CDK5RAP2Q96SN8 1893 aa21.67■■□□□ 1.06
COL13A1-201ENST00000354547 G3V3G9 751 aa21.67■■□□□ 1.06
COL13A1-201ENST00000354547 DCAF8Q5TAQ9 597 aa21.67■■□□□ 1.06
COL13A1-201ENST00000354547 LRRC55Q6ZSA7 311 aa21.67■■□□□ 1.06
COL13A1-201ENST00000354547 RIC8AQ9NPQ8 531 aa21.67■■□□□ 1.06
COL13A1-201ENST00000354547 SALL4Q9UJQ4 1053 aa21.67■■□□□ 1.06
COL13A1-201ENST00000354547 GABPAQ06546 454 aa21.67■■□□□ 1.06
COL13A1-201ENST00000354547 NFIAQ12857 509 aa21.67■■□□□ 1.06
COL13A1-201ENST00000354547 CCDC84Q86UT8 332 aaPredicted RBP21.67■■□□□ 1.06
COL13A1-201ENST00000354547 ZFPM1Q8IX07 1006 aa21.67■■□□□ 1.06
COL13A1-201ENST00000354547 POTEB3A0JP26 581 aa21.66■■□□□ 1.06
COL13A1-201ENST00000354547 POTECB2RU33 542 aa21.66■■□□□ 1.06
COL13A1-201ENST00000354547 FGFR1OPO95684 399 aaKnown RBP21.66■■□□□ 1.06
COL13A1-201ENST00000354547 DDR1Q08345 913 aa21.66■■□□□ 1.06
COL13A1-201ENST00000354547 PDIA5Q14554 519 aa21.66■■□□□ 1.06
COL13A1-201ENST00000354547 POTEBQ6S5H4 581 aa21.66■■□□□ 1.06
COL13A1-201ENST00000354547 ZC3H12CQ9C0D7 883 aaKnown RBP21.66■■□□□ 1.06
COL13A1-201ENST00000354547 SH2D4AQ9H788 454 aa21.66■■□□□ 1.06
COL13A1-201ENST00000354547 UBAP1LF5GYI3 381 aa21.66■■□□□ 1.06
COL13A1-201ENST00000354547 KRT18P05783 430 aaKnown RBP21.66■■□□□ 1.06
COL13A1-201ENST00000354547 FIGNQ5HY92 759 aa21.66■■□□□ 1.06
COL13A1-201ENST00000354547 FAM26FQ5R3K3 315 aa21.66■■□□□ 1.06
COL13A1-201ENST00000354547 TRIM58Q8NG06 486 aa21.66■■□□□ 1.06
COL13A1-201ENST00000354547 FAM204AQ9H8W3 233 aa21.66■■□□□ 1.06
COL13A1-201ENST00000354547 PCDHAC2Q9Y5I4 1007 aa21.66■■□□□ 1.06
COL13A1-201ENST00000354547 MRPL12P52815 198 aaKnown RBP21.66■■□□□ 1.06
COL13A1-201ENST00000354547 HERC4Q5GLZ8 1057 aaPredicted RBP21.66■■□□□ 1.06
COL13A1-201ENST00000354547 TSGA10Q9BZW7 698 aa21.66■■□□□ 1.06
COL13A1-201ENST00000354547 SNX12Q9UMY4 172 aa21.66■■□□□ 1.06
COL13A1-201ENST00000354547 TAL1P17542 331 aaPredicted RBP21.65■■□□□ 1.06
COL13A1-201ENST00000354547 SHMT1P34896 483 aa21.65■■□□□ 1.06
COL13A1-201ENST00000354547 SLC1A4P43007 532 aa21.65■■□□□ 1.06
COL13A1-201ENST00000354547 LRRC63Q05C16 580 aa21.65■■□□□ 1.06
COL13A1-201ENST00000354547 CERKQ8TCT0 537 aa21.65■■□□□ 1.06
COL13A1-201ENST00000354547 DNAJC19Q96DA6 116 aa21.65■■□□□ 1.06
COL13A1-201ENST00000354547 JRKLQ9Y4A0 524 aa21.65■■□□□ 1.06
COL13A1-201ENST00000354547 POLR2FP61218 127 aaKnown RBP21.65■■□□□ 1.06
COL13A1-201ENST00000354547 KCNMA1Q12791 1236 aa21.65■■□□□ 1.06
COL13A1-201ENST00000354547 PURBQ96QR8 312 aaKnown RBP21.65■■□□□ 1.06
COL13A1-201ENST00000354547 LRRC1Q9BTT6 524 aa21.65■■□□□ 1.06
COL13A1-201ENST00000354547 ACBD3Q9H3P7 528 aa21.65■■□□□ 1.06
COL13A1-201ENST00000354547 BMP2KQ9NSY1 1161 aaPredicted RBP21.65■■□□□ 1.06
COL13A1-201ENST00000354547 PPEF1O14829 653 aaPredicted RBP21.64■■□□□ 1.06
COL13A1-201ENST00000354547 RNF40O75150 1001 aa21.64■■□□□ 1.06
COL13A1-201ENST00000354547 TUBBP07437 444 aa21.64■■□□□ 1.06
COL13A1-201ENST00000354547 CCDC181Q5TID7 509 aa21.64■■□□□ 1.06
COL13A1-201ENST00000354547 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.64■■□□□ 1.06
COL13A1-201ENST00000354547 CREG2Q8IUH2 290 aa21.64■■□□□ 1.06
COL13A1-201ENST00000354547 ANO9A1A5B4 782 aa21.64■■□□□ 1.05
COL13A1-201ENST00000354547 MEIS1O00470 390 aa21.64■■□□□ 1.05
COL13A1-201ENST00000354547 ZBTB5O15062 677 aa21.64■■□□□ 1.05
COL13A1-201ENST00000354547 SNHG28P0DPA3 235 aa21.64■■□□□ 1.05
COL13A1-201ENST00000354547 MAP9Q49MG5 647 aa21.64■■□□□ 1.05
COL13A1-201ENST00000354547 TMEM119Q4V9L6 283 aa21.64■■□□□ 1.05
COL13A1-201ENST00000354547 GPBP1Q86WP2 473 aa21.64■■□□□ 1.05
COL13A1-201ENST00000354547 BAP1Q92560 729 aa21.64■■□□□ 1.05
COL13A1-201ENST00000354547 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.64■■□□□ 1.05
COL13A1-201ENST00000354547 LSM14BQ9BX40 385 aaKnown RBP21.64■■□□□ 1.05
COL13A1-201ENST00000354547 KCNQ5Q9NR82 932 aa21.64■■□□□ 1.05
COL13A1-201ENST00000354547 COL4A3BPQ9Y5P4 624 aa21.64■■□□□ 1.05
COL13A1-201ENST00000354547 ZNF831Q5JPB2 1677 aa21.64■■□□□ 1.05
COL13A1-201ENST00000354547 hCG_1984214I3L0E3 225 aa21.64■■□□□ 1.05
COL13A1-201ENST00000354547 NOVP48745 357 aa21.64■■□□□ 1.05
COL13A1-201ENST00000354547 CDK17Q00537 523 aa21.64■■□□□ 1.05
COL13A1-201ENST00000354547 CDC42EP5Q6NZY7 148 aa21.64■■□□□ 1.05
COL13A1-201ENST00000354547 ZNF713Q8N859 430 aaPredicted RBP21.64■■□□□ 1.05
COL13A1-201ENST00000354547 DMGDHQ9UI17 866 aaKnown RBP21.64■■□□□ 1.05
COL13A1-201ENST00000354547 PCDHA1Q9Y5I3 950 aa21.64■■□□□ 1.05
COL13A1-201ENST00000354547 RNASE9P60153 205 aaKnown RBP21.63■■□□□ 1.05
COL13A1-201ENST00000354547 FKBP3Q00688 224 aaKnown RBP21.63■■□□□ 1.05
COL13A1-201ENST00000354547 ZNF662Q6ZS27 426 aa21.63■■□□□ 1.05
COL13A1-201ENST00000354547 FAM71BQ8TC56 605 aa21.63■■□□□ 1.05
COL13A1-201ENST00000354547 HPCAL4Q9UM19 191 aa21.63■■□□□ 1.05
COL13A1-201ENST00000354547 PLA2G4BP0C869 781 aa21.63■■□□□ 1.05
COL13A1-201ENST00000354547 RBM5P52756 815 aaKnown RBP eCLIP21.63■■□□□ 1.05
COL13A1-201ENST00000354547 ORC2Q13416 577 aaPredicted RBP21.63■■□□□ 1.05
COL13A1-201ENST00000354547 PPP4R3AQ6IN85 833 aa21.63■■□□□ 1.05
COL13A1-201ENST00000354547 PDXDC1Q6P996 788 aa21.63■■□□□ 1.05
COL13A1-201ENST00000354547 LEKR1Q6ZMV7 388 aa21.63■■□□□ 1.05
COL13A1-201ENST00000354547 MTMR8Q96EF0 704 aa21.63■■□□□ 1.05
COL13A1-201ENST00000354547 MS4A14Q96JA4 679 aa21.63■■□□□ 1.05
COL13A1-201ENST00000354547 ALS2CR12Q96Q35 445 aa21.63■■□□□ 1.05
COL13A1-201ENST00000354547 OSBPL9Q96SU4 736 aa21.63■■□□□ 1.05
COL13A1-201ENST00000354547 SELENOOQ9BVL4 669 aa21.63■■□□□ 1.05
COL13A1-201ENST00000354547 PODXL2Q9NZ53 605 aa21.63■■□□□ 1.05
COL13A1-201ENST00000354547 COBLL1Q53SF7 1204 aa21.62■■□□□ 1.05
COL13A1-201ENST00000354547 FNBP4Q8N3X1 1017 aaPredicted RBP21.62■■□□□ 1.05
COL13A1-201ENST00000354547 IGKV6D-41A0A0C4DH26 115 aa21.62■■□□□ 1.05
COL13A1-201ENST00000354547 POTEFA5A3E0 1075 aa21.62■■□□□ 1.05
COL13A1-201ENST00000354547 POTEIP0CG38 1075 aa21.62■■□□□ 1.05
COL13A1-201ENST00000354547 GGCXP38435 758 aa21.62■■□□□ 1.05
COL13A1-201ENST00000354547 IKQ13123 557 aaPredicted RBP21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms