RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 KBTBD4Q9NVX7 518 aa23.06■■□□□ 1.28
TRIM4-202ENST00000354241 KDM3AQ9Y4C1 1321 aa23.06■■□□□ 1.28
TRIM4-202ENST00000354241 BECN2A8MW95 431 aa23.06■■□□□ 1.28
TRIM4-202ENST00000354241 GOLGA6L19H0YKK7 550 aa23.06■■□□□ 1.28
TRIM4-202ENST00000354241 ITGB5P18084 799 aa23.06■■□□□ 1.28
TRIM4-202ENST00000354241 PLCB2Q00722 1185 aa23.06■■□□□ 1.28
TRIM4-202ENST00000354241 TMEM119Q4V9L6 283 aa23.06■■□□□ 1.28
TRIM4-202ENST00000354241 LRCH2Q5VUJ6 765 aa23.06■■□□□ 1.28
TRIM4-202ENST00000354241 AOPEPQ8N6M6 819 aa23.06■■□□□ 1.28
TRIM4-202ENST00000354241 SLC5A5Q92911 643 aa23.06■■□□□ 1.28
TRIM4-202ENST00000354241 GSDMAQ96QA5 445 aa23.06■■□□□ 1.28
TRIM4-202ENST00000354241 STK17AQ9UEE5 414 aa23.06■■□□□ 1.28
TRIM4-202ENST00000354241 VAV3Q9UKW4 847 aa23.06■■□□□ 1.28
TRIM4-202ENST00000354241 CNMDO75829 334 aa23.05■■□□□ 1.28
TRIM4-202ENST00000354241 BMP6P22004 513 aa23.05■■□□□ 1.28
TRIM4-202ENST00000354241 MRPS9P82933 396 aaKnown RBP23.05■■□□□ 1.28
TRIM4-202ENST00000354241 DHX8Q14562 1220 aaKnown RBP23.05■■□□□ 1.28
TRIM4-202ENST00000354241 ECM1Q16610 540 aa23.05■■□□□ 1.28
TRIM4-202ENST00000354241 NCAPG2Q86XI2 1143 aa23.05■■□□□ 1.28
TRIM4-202ENST00000354241 DHX40Q8IX18 779 aaKnown RBP23.05■■□□□ 1.28
TRIM4-202ENST00000354241 ERMNQ8TAM6 284 aa23.05■■□□□ 1.28
TRIM4-202ENST00000354241 WDR11Q9BZH6 1224 aa23.05■■□□□ 1.28
TRIM4-202ENST00000354241 UBIAD1Q9Y5Z9 338 aa23.05■■□□□ 1.28
TRIM4-202ENST00000354241 LCTP09848 1927 aa23.04■■□□□ 1.28
TRIM4-202ENST00000354241 ITGBL1O95965 494 aaPredicted RBP23.04■■□□□ 1.28
TRIM4-202ENST00000354241 CETPP11597 493 aa23.04■■□□□ 1.28
TRIM4-202ENST00000354241 GTF2A2P52657 109 aa23.04■■□□□ 1.28
TRIM4-202ENST00000354241 CST9Q5W186 159 aa23.04■■□□□ 1.28
TRIM4-202ENST00000354241 HAUS3Q68CZ6 603 aa23.04■■□□□ 1.28
TRIM4-202ENST00000354241 ANKRD35Q8N283 1001 aa23.04■■□□□ 1.28
TRIM4-202ENST00000354241 BPIFA3Q9BQP9 254 aa23.04■■□□□ 1.28
TRIM4-202ENST00000354241 BLOC1S4Q9NUP1 217 aa23.04■■□□□ 1.28
TRIM4-202ENST00000354241 FBXO40Q9UH90 709 aa23.04■■□□□ 1.28
TRIM4-202ENST00000354241 CCL15-CCL14A0A0B4J2E2 113 aa23.04■■□□□ 1.28
TRIM4-202ENST00000354241 GAS7O60861 476 aa23.04■■□□□ 1.28
TRIM4-202ENST00000354241 CCL15Q16663 113 aa23.04■■□□□ 1.28
TRIM4-202ENST00000354241 NIPA1Q7RTP0 329 aa23.04■■□□□ 1.28
TRIM4-202ENST00000354241 LARP4BQ92615 738 aaKnown RBP23.04■■□□□ 1.28
TRIM4-202ENST00000354241 MAF1Q9H063 256 aa23.04■■□□□ 1.28
TRIM4-202ENST00000354241 NT5C3AQ9H0P0 336 aa23.04■■□□□ 1.28
TRIM4-202ENST00000354241 POTEB3A0JP26 581 aa23.03■■□□□ 1.28
TRIM4-202ENST00000354241 SLC26A4O43511 780 aa23.03■■□□□ 1.28
TRIM4-202ENST00000354241 PSMD10O75832 226 aa23.03■■□□□ 1.28
TRIM4-202ENST00000354241 RPN1P04843 607 aaKnown RBP23.03■■□□□ 1.28
TRIM4-202ENST00000354241 MYL1P05976 194 aa23.03■■□□□ 1.28
TRIM4-202ENST00000354241 BCRP11274 1271 aa23.03■■□□□ 1.28
TRIM4-202ENST00000354241 CCND2P30279 289 aa23.03■■□□□ 1.28
TRIM4-202ENST00000354241 MCM6Q14566 821 aa23.03■■□□□ 1.28
TRIM4-202ENST00000354241 HYIQ5T013 277 aa23.03■■□□□ 1.28
TRIM4-202ENST00000354241 POTEBQ6S5H4 581 aa23.03■■□□□ 1.28
TRIM4-202ENST00000354241 SV2BQ7L1I2 683 aa23.03■■□□□ 1.28
TRIM4-202ENST00000354241 NSUN6Q8TEA1 469 aaKnown RBP23.03■■□□□ 1.28
TRIM4-202ENST00000354241 RAD54LQ92698 747 aa23.03■■□□□ 1.28
TRIM4-202ENST00000354241 MS4A4AQ96JQ5 239 aa23.03■■□□□ 1.28
TRIM4-202ENST00000354241 MOV10L1Q9BXT6 1211 aaKnown RBP23.03■■□□□ 1.28
TRIM4-202ENST00000354241 JADE2Q9NQC1 790 aa23.03■■□□□ 1.28
TRIM4-202ENST00000354241 PKD2L1Q9P0L9 805 aa23.03■■□□□ 1.28
TRIM4-202ENST00000354241 PNMA3Q9UL41 463 aa23.03■■□□□ 1.28
TRIM4-202ENST00000354241 STK24Q9Y6E0 443 aa23.03■■□□□ 1.28
TRIM4-202ENST00000354241 IPO5O00410 1097 aaKnown RBP23.02■■□□□ 1.28
TRIM4-202ENST00000354241 CHMP2AO43633 222 aa23.02■■□□□ 1.28
TRIM4-202ENST00000354241 MED24O75448 989 aa23.02■■□□□ 1.28
TRIM4-202ENST00000354241 AMPD3Q01432 767 aa23.02■■□□□ 1.28
TRIM4-202ENST00000354241 CCDC173Q0VFZ6 552 aa23.02■■□□□ 1.28
TRIM4-202ENST00000354241 OTOP1Q7RTM1 612 aa23.02■■□□□ 1.28
TRIM4-202ENST00000354241 KCNK18Q7Z418 384 aa23.02■■□□□ 1.28
TRIM4-202ENST00000354241 TEKT3Q9BXF9 490 aa23.02■■□□□ 1.28
TRIM4-202ENST00000354241 TXNRD2Q9NNW7 524 aa23.02■■□□□ 1.28
TRIM4-202ENST00000354241 KCNH7Q9NS40 1196 aa23.02■■□□□ 1.28
TRIM4-202ENST00000354241 RBPJLQ9UBG7 517 aa23.02■■□□□ 1.28
TRIM4-202ENST00000354241 DACH1Q9UI36 760 aa23.02■■□□□ 1.28
TRIM4-202ENST00000354241 KIAA1024Q9UPX6 916 aa23.02■■□□□ 1.28
TRIM4-202ENST00000354241 NR3C2P08235 984 aa23.02■■□□□ 1.28
TRIM4-202ENST00000354241 MTMR1Q13613 665 aa23.02■■□□□ 1.28
TRIM4-202ENST00000354241 MLKLQ8NB16 471 aa23.02■■□□□ 1.28
TRIM4-202ENST00000354241 RMND1Q9NWS8 449 aa23.02■■□□□ 1.28
TRIM4-202ENST00000354241 EML1O00423 815 aa23.01■■□□□ 1.27
TRIM4-202ENST00000354241 CYP2C8P10632 490 aa23.01■■□□□ 1.27
TRIM4-202ENST00000354241 PPP2R5CQ13362 524 aa23.01■■□□□ 1.27
TRIM4-202ENST00000354241 SPRYD7Q5W111 196 aa23.01■■□□□ 1.27
TRIM4-202ENST00000354241 XRRA1Q6P2D8 792 aa23.01■■□□□ 1.27
TRIM4-202ENST00000354241 PFASO15067 1338 aa23.01■■□□□ 1.27
TRIM4-202ENST00000354241 TESPA1A2RU30 521 aaPredicted RBP23■■□□□ 1.27
TRIM4-202ENST00000354241 PDHXO00330 501 aa23■■□□□ 1.27
TRIM4-202ENST00000354241 SLC25A27O95847 323 aa23■■□□□ 1.27
TRIM4-202ENST00000354241 ERCC3P19447 782 aa23■■□□□ 1.27
TRIM4-202ENST00000354241 HUNKP57058 714 aa23■■□□□ 1.27
TRIM4-202ENST00000354241 CATSPER3Q86XQ3 398 aa23■■□□□ 1.27
TRIM4-202ENST00000354241 BRI3BPQ8WY22 251 aa23■■□□□ 1.27
TRIM4-202ENST00000354241 C7orf25Q9BPX7 421 aa23■■□□□ 1.27
TRIM4-202ENST00000354241 TRIM9Q9C026 710 aa23■■□□□ 1.27
TRIM4-202ENST00000354241 AGO4Q9HCK5 861 aaKnown RBP23■■□□□ 1.27
TRIM4-202ENST00000354241 SMTNL1A8MU46 457 aa23■■□□□ 1.27
TRIM4-202ENST00000354241 BTBD19C9JJ37 291 aa23■■□□□ 1.27
TRIM4-202ENST00000354241 DDX39AO00148 427 aaKnown RBP23■■□□□ 1.27
TRIM4-202ENST00000354241 ZBTB48P10074 688 aaPredicted RBP23■■□□□ 1.27
TRIM4-202ENST00000354241 RPA1P27694 616 aa23■■□□□ 1.27
TRIM4-202ENST00000354241 Q3C1V9 767 aa23■■□□□ 1.27
TRIM4-202ENST00000354241 VSIG10LQ86VR7 867 aa23■■□□□ 1.27
TRIM4-202ENST00000354241 RIT2Q99578 217 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms